Tk10908, Tk10908 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10908
Unique NameTk10908
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length646
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001699Transcription factor, T-boxPRINTSPR00937TBOXcoord: 325..338
score: 49.53
coord: 362..376
score: 66.67
coord: 403..416
score: 71.43
coord: 424..432
score: 89.13
coord: 258..282
score: 65.3
IPR001699Transcription factor, T-boxSMARTSM00425tbox5coord: 240..437
e-value: 2.7E-103
score: 359.1
IPR001699Transcription factor, T-boxPFAMPF00907T-boxcoord: 243..432
e-value: 1.2E-73
score: 247.2
IPR001699Transcription factor, T-boxPANTHERPTHR11267T-BOX PROTEIN-RELATEDcoord: 229..447
IPR001699Transcription factor, T-boxPROSITEPS50252TBOX_3coord: 245..432
score: 68.012
IPR001699Transcription factor, T-boxCDDcd00182TBOXcoord: 241..435
e-value: 3.02452E-110
score: 327.622
IPR036960T-box superfamilyGENE3D2.60.40.820coord: 230..432
e-value: 9.5E-87
score: 291.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 494..516
NoneNo IPR availablePANTHERPTHR11267:SF131T-BOX TRANSCRIPTION FACTOR TBX20coord: 229..447
IPR018186Transcription factor, T-box, conserved sitePROSITEPS01283TBOX_1coord: 250..269
IPR008967p53-like transcription factor, DNA-bindingSUPERFAMILY49417p53-like transcription factorscoord: 241..432

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold348_size200312-snap-gene-1.17-mRNA-1maker-scaffold348_size200312-snap-gene-1.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10908 ID=Tk10908|Name=Tk10908|organism=Tigriopus kingsejongensis|type=polypeptide|length=646bp
MVTPASKAGYSMPSGGFEGSRLNFDQRPTSSKVCESEQKPQTQESIFGIA
MDKQPPRGLSSSKGQPSPKPNPTTNLNPYHGNIRNGLLFQVSRSDTTQGA
IHHTNHHLQDEEANDDDDKTEVTGDTTAAMGSDDGGRQRSLPPAPLGRSS
PPQVGDLGRQMKLASEAVDSAKPNPPMEGHHLAEEDKVEDNTPSDTTHQD
NEVEASDSEVTGPEGAAPIWRQVVSPLRSQELPPNEELSRVECHLETREL
WEKFHELGTEMIITKTGRRMFPTVRCSFSGLDRSSHYAVVIDIIPCDNKR
YRYAYHRSSWLVAGKADPPPPYRFYTHPDSPVSGEQLLSRQVVSFEKVKL
TNNELDKTGQIILNSMHKFQPRVHLVKLDRATRNRPLMDLAQEIHKTFVF
PVTAFTAVTAYQNQLITRLKIDSNPFAKGFRDSSRLLEFDRESPSSPPAH
LLAFPGLESVSATNGLVMQPPPGSLEDMQQRLLLPLNGPPVPNLSGSTFH
SQLQQQQQLPHQPLGSTTLPGTLISTLYNLRKSQLMTKVPPSPALSLQLW
SQWIQVQQQIQALALLQAHQQRRQQQQHHHQHHQQVQFLNASMPGSNSCH
FDHLRQKLDRGGGGGPFQRFVPYDLTARRPSLARISPPPPTPPMSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001699TF_T-box
IPR036960T-box_sf
IPR018186TF_T-box_CS
IPR008967p53-like_TF_DNA-bd
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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