Protein

## EMLSAP00000005238

Length
1,349 amino acids

### Protein family membership

None predicted.

### Domains and repeats

1. Domain
   99 - 193
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
   200 - 271
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
       - Ribosomal protein S1, RNA-binding domain (IPR003029)
   277 - 369
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
       - Ribosomal protein S1, RNA-binding domain (IPR003029)
   420 - 503
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
       - Ribosomal protein S1, RNA-binding domain (IPR003029)
   513 - 586
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
       - Ribosomal protein S1, RNA-binding domain (IPR003029)
   592 - 681
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
       - Ribosomal protein S1, RNA-binding domain (IPR003029)
   691 - 774
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
       - Ribosomal protein S1, RNA-binding domain (IPR003029)
   805 - 894
   - Nucleic acid-binding, OB-fold (IPR012340)
     - RNA-binding domain, S1 (IPR022967)
   1,079 - 1,313
   - Tetratricopeptide-like helical (IPR011990)
2. Domain
   1,167 - 1,305
   - Tetratricopeptide repeat-containing domain (IPR013026)
3. Domain
   1,218 - 1,341
   - Suppressor of forked (IPR008847)
4. Repeat
   1,109 - 1,146
   - RNA-processing protein, HAT helix (IPR003107)
   1,181 - 1,213
   - RNA-processing protein, HAT helix (IPR003107)
   1,216 - 1,250
   - RNA-processing protein, HAT helix (IPR003107)
   1,252 - 1,284
   - RNA-processing protein, HAT helix (IPR003107)
   1,286 - 1,321
   - RNA-processing protein, HAT helix (IPR003107)

1 200 400 600 800 1000 1200 1349

### Detailed signature matches

1. IPR012340
   Nucleic acid-binding, OB-fold
   1. SSF50249 (Nucleic a...)
      516 - 586
      SUPERFAMILY
      SSF50249 (Nucleic acid-binding proteins)
      420 - 503
      SUPERFAMILY
      SSF50249 (Nucleic acid-binding proteins)
      200 - 271
      SUPERFAMILY
      SSF50249 (Nucleic acid-binding proteins)
      277 - 369
      SUPERFAMILY
      SSF50249 (Nucleic acid-binding proteins)
      805 - 894
      SUPERFAMILY
      SSF50249 (Nucleic acid-binding proteins)
   2. G3DSA:2.40.50...
      691 - 774
      GENE3D
      G3DSA:2.40.50.140 (G3DSA:2.40.50.140)
      420 - 498
      GENE3D
      G3DSA:2.40.50.140 (G3DSA:2.40.50.140)
      519 - 586
      GENE3D
      G3DSA:2.40.50.140 (G3DSA:2.40.50.140)
      202 - 270
      GENE3D
      G3DSA:2.40.50.140 (G3DSA:2.40.50.140)
      592 - 665
      GENE3D
      G3DSA:2.40.50.140 (G3DSA:2.40.50.140)
      99 - 184
      GENE3D
      G3DSA:2.40.50.140 (G3DSA:2.40.50.140)
2. IPR022967
   RNA-binding domain, S1
   1. SM00316 (S1)
      423 - 495
      SMART
      SM00316 (S1)
      207 - 269
      SMART
      SM00316 (S1)
      809 - 871
      SMART
      SM00316 (S1)
      284 - 348
      SMART
      SM00316 (S1)
      513 - 584
      SMART
      SM00316 (S1)
      699 - 774
      SMART
      SM00316 (S1)
      604 - 681
      SMART
      SM00316 (S1)
      104 - 193
      SMART
      SM00316 (S1)
3. IPR003029
   Ribosomal protein S1, RNA-binding domain
   1. PS50126 (S1)
      606 - 681
      PROSITE profiles
      PS50126 (S1)
      281 - 348
      PROSITE profiles
      PS50126 (S1)
      425 - 495
      PROSITE profiles
      PS50126 (S1)
      515 - 584
      PROSITE profiles
      PS50126 (S1)
      701 - 774
      PROSITE profiles
      PS50126 (S1)
      209 - 269
      PROSITE profiles
      PS50126 (S1)
   2. PF00575 (S1)
      519 - 584
      Pfam
      PF00575 (S1)
4. IPR011990
   Tetratricopeptide-like helical
   1. G3DSA:1.25.40.10
      1,079 - 1,313
      GENE3D
      G3DSA:1.25.40.10 (G3DSA:1.25.40.10)
5. IPR013026
   Tetratricopeptide repeat-containing domain
   1. PS50293 (TPR_REGION)
      1,167 - 1,305
      PROSITE profiles
      PS50293 (TPR_REGION)
6. IPR008847
   Suppressor of forked
   1. PF05843 (Suf)
      1,218 - 1,341
      Pfam
      PF05843 (Suf)
7. IPR003107
   RNA-processing protein, HAT helix
   1. SM00386 (HAT)
      1,252 - 1,284
      SMART
      SM00386 (HAT)
      1,286 - 1,321
      SMART
      SM00386 (HAT)
      1,181 - 1,213
      SMART
      SM00386 (HAT)
      1,216 - 1,250
      SMART
      SM00386 (HAT)
      1,109 - 1,146
      SMART
      SM00386 (HAT)

no IPR
Unintegrated signatures

1. Coil
   1,215 - 1,236
   COILS
   Coil (Coil)
2. PTHR23270 (PROGRAMM...)
   1 - 1,349
   PANTHER
   PTHR23270 (PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5))
3. PTHR23270:SF1 (SUBF...)
   1 - 1,349
   PANTHER
   PTHR23270:SF1 (SUBFAMILY NOT NAMED)
4. SSF48452 (TPR-like)
   1,051 - 1,166
   SUPERFAMILY
   SSF48452 (TPR-like)
   1,167 - 1,340
   SUPERFAMILY
   SSF48452 (TPR-like)

### GO term prediction

#### Biological Process

GO:0006396 RNA processing
GO:0006397 mRNA processing

#### Molecular Function

GO:0003723 RNA binding
GO:0005515 protein binding

#### Cellular Component

GO:0005622 intracellular
GO:0005634 nucleus