EMLSAG00000000314, EMLSAG00000000314-683080 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Match: gi|592755017|gb|GAXK01199396.1| (TSA: Calanus finmarchicus comp120583_c0_seq1 transcribed RNA sequence) HSP 1 Score: 120.553 bits (301), Expect = 1.513e-28 Identity = 92/308 (29.87%), Postives = 154/308 (50.00%), Query Frame = 0 Query: 1 MKLFSTKLEADLKVYVSLYMLMFCISWLLIVPMLIHVHSNDECWLFITP------RMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKXXXXXXXXXXXXXXXXXXGFATTCQHLL----REVRFFVQKRFDITQYGYQDRQDKVERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQ--RIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKRRQYLKARHSNTSFF--GSEFG 294 MK+ KLE LK+Y+ LY F ++L+ +PML+HV EC LF+ + EYG C G L++ + L L++ QL K + P M S ++ + F +I H L+LVI +++ G+A TC+ + +E+RF R T + +Q E F + S+ +YTN N G + I+CR +L D NH ++K+N + YG + + +D G+ ++ N LEM++A +WI VLW+ +++F+ K R +L+A ++ S + GS++G Sbjct: 85 MKMKPMKLEGALKLYMVLYFFAFLFTFLMSIPMLLHVMPKSECLLFVQTSRDQEKKFEYGSPGGCMAAGILPLLVALGALGLMLAQWLQLRKLRAHLDNP-EMSSDEYRAECRKTFWKMIAAHCCIGGLVLVIACILSAGYALTCRSIYLIVEKEIRF----RISHTPNSNRGQQQVHENFASDQSFNRYTNQNLNTLGQNRHENSITCRSLLTDKTNHFELKKNHQRNDFYSQYYGFQNNENSLSDIGNFEHFAFQDNLRLEMTLAGAWISAVLWS-IILFLMVKERHHLRAHITDESMWGGGSDYG 990
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Match: gi|592777385|gb|GAXK01177183.1| (TSA: Calanus finmarchicus comp140732_c2_seq1 transcribed RNA sequence) HSP 1 Score: 61.6178 bits (148), Expect = 2.626e-9 Identity = 62/255 (24.31%), Postives = 112/255 (43.92%), Query Frame = 0 Query: 33 MLIHVHSNDECWLFI---TPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFI--EKVVMFFSHLIKXXXXXXXXXXXXXXXXXXGFATTCQHLLREVRFFVQKRFDITQYGYQD----RQDKV-ERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSD--EYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKR 275 ++ HV EC LF ++ YG A C IGY L +G I A+++ +I+ FK R + S F +KV+ + ++ H + + ++ + +T G+ C ++ + ++ + + +D R +K+ ERF D+ + YT N +G ++CR + DPI H ++ N +G + D Y R N +E +A W+ +LW G L+FMF ++ Sbjct: 722 LVAHVDPFSECILFSHLEGNKLYYGSEAYCETIGY--LFLGCIVGAVVMFYIT----FKHRSELMGFYNSGQFTKSDKVLTISNKIMTGHFIITLAVIFLTLALTTGYQIACDNISDIINGRLRTKLN------RDPNVLRGEKIDERFNDDHQFWHYTAEISNAFGQNLYAIRMTCRTIFTDPIIHQELHDNHVDRYSDYFGYWYKQDLFAYDSR----YQAVLTNGLIEACMAGGWVSVLLWGGSLVFMFIQK 1438
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Match: gi|592907593|gb|GAXK01050782.1| (TSA: Calanus finmarchicus comp799829_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 3.247e-6 Identity = 59/265 (22.26%), Postives = 117/265 (44.15%), Query Frame = 0 Query: 25 ISWLLIVPMLIHVHSNDECWLFI---TPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKXXXXXXXXXXXXXXXXXXGFATTCQHLLREVRFFVQKRFDITQYGYQD----RQDKVE-RFEDESSYRKYTNGQRNDYGSE-YNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKRRQYLK 280 +S L ++ HV EC LF + YG C +IGYG ++ + L ++ +++ L + +H ++ K + LI +H + ++L++ +T+G+ ++C + + + + QD R + +E RF ++ + +Y N +GS YN++ SCR + DP + N +G + D Y+ + R N +E S+A +W+ +W G IF+F ++++ K Sbjct: 403 LSLLAGATLVAHVDPLSECILFAWQEGDSLSYGEPHYCDIIGYGFILNNV--LVIVTAYLT-LRQRSNISSLSKHFSMRNL--KSLKIGKQLIVLHGIVLSIVLILTVFLTVGYKSSCDQFEDHITKLLNVKLN------QDPNLLRGETIEERFVEDPMFWRYAQQVTNAFGSNMYNIKA-SCRALFTDPDIATLLHDNHVKKYSGYFGWWYHQDIYSYNAQ--AQAVRTNVLIEASLAGAWMGTFVWLGATIFIFVQKKRIAK 1155
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Match: gi|592831561|gb|GAXK01125983.1| (TSA: Calanus finmarchicus comp605035_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 7.436e-2 Identity = 23/85 (27.06%), Postives = 42/85 (49.41%), Query Frame = 0 Query: 13 KVYVSLYMLMFCISWLLIVPMLIHVHSNDECWLFITPRME---YGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQP 94 K +S+ M+ S + VPM++ + DEC LF++ R E YG A C I ++ ++ L+ I+ + +R+ +P Sbjct: 877 KWVISMVMVGVLFSIGVAVPMILITYPGDECLLFVSVRGEALIYGQPAGCTFISASHCLVAFSSIVFLIILITCQRRGGQRQTEP 1131
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Match: gi|592804982|gb|GAXK01149586.1| (TSA: Calanus finmarchicus comp96616_c2_seq17 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 6.296e+0 Identity = 23/83 (27.71%), Postives = 35/83 (42.17%), Query Frame = 0 Query: 186 NDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLL 268 N +GS+ +SCR + P + I + + + G+D +T R SL S S SW L +LWTG + Sbjct: 132 NFFGSQ--T*KVSCR--ITSPRRSILISQPSSIER*RASFAFRGTDRHTSRPSLISPNSLSVEQERRSFRSSWYLVILWTGFI 368
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Match: gi|592804990|gb|GAXK01149578.1| (TSA: Calanus finmarchicus comp96616_c2_seq9 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 9.684e+0 Identity = 23/83 (27.71%), Postives = 35/83 (42.17%), Query Frame = 0 Query: 186 NDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLL 268 N +GS+ +SCR + P + I + + + G+D +T R SL S S SW L +LWTG + Sbjct: 156 NFFGSQ--T*KVSCR--ITSPRRSILISQPSSIER*RASFAFRGTDRHTSRPSLISPNSLSVEQERRSFRSSWYLVILWTGFI 392
BLAST of EMLSAG00000000314 vs. L. salmonis peptides
Match: EMLSAP00000000314 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:61706:63705:1 gene:EMLSAG00000000314 transcript:EMLSAT00000000314 description:"maker-LSalAtl2s1046-augustus-gene-0.8") HSP 1 Score: 924.08 bits (2387), Expect = 0.000e+0 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0 Query: 1 MKLFSTKLEADLKVYVSLYMLMFCISWLLIVPMLIHVHSNDECWLFITPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKVHIVGNVLILVIVAVITIGFATTCQHLLREVRFFVQKRFDITQYGYQDRQDKVERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKRRQYLKARHSNTSFFGSEFGSHASSNRSKSKASSRYVPKSECNSYQSAVSPSMMGYVDEIAKYPENNEVIPPFLSNFEATMSNDKLEFDNSLMNETDINEYLSEHVLDEELNSAIMGTELGSQYEPNEGPSIPEIHIEDYNESIHLNTNRVKGRRSEREINETKQTVIL 443 MKLFSTKLEADLKVYVSLYMLMFCISWLLIVPMLIHVHSNDECWLFITPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKVHIVGNVLILVIVAVITIGFATTCQHLLREVRFFVQKRFDITQYGYQDRQDKVERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKRRQYLKARHSNTSFFGSEFGSHASSNRSKSKASSRYVPKSECNSYQSAVSPSMMGYVDEIAKYPENNEVIPPFLSNFEATMSNDKLEFDNSLMNETDINEYLSEHVLDEELNSAIMGTELGSQYEPNEGPSIPEIHIEDYNESIHLNTNRVKGRRSEREINETKQTVIL Sbjct: 1 MKLFSTKLEADLKVYVSLYMLMFCISWLLIVPMLIHVHSNDECWLFITPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKVHIVGNVLILVIVAVITIGFATTCQHLLREVRFFVQKRFDITQYGYQDRQDKVERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKRRQYLKARHSNTSFFGSEFGSHASSNRSKSKASSRYVPKSECNSYQSAVSPSMMGYVDEIAKYPENNEVIPPFLSNFEATMSNDKLEFDNSLMNETDINEYLSEHVLDEELNSAIMGTELGSQYEPNEGPSIPEIHIEDYNESIHLNTNRVKGRRSEREINETKQTVIL 443
BLAST of EMLSAG00000000314 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold534_size144770-snap-gene-0.37 (protein:Tk11144 transcript:maker-scaffold534_size144770-snap-gene-0.37-mRNA-1 annotation:"hypothetical protein CGI_10017331") HSP 1 Score: 167.933 bits (424), Expect = 1.269e-46 Identity = 124/428 (28.97%), Postives = 209/428 (48.83%), Query Frame = 0 Query: 4 FSTKLEADLKVYVSLYMLMFCISWLLIVPMLIHVHSNDECWLFITPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKVHIVGNVLILVIVAVITIGFATTCQHLLREVRFFVQKRFDITQYGYQDRQDKV-ERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRN--QDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKRRQYLKARHSNTSFFGSEFGSHAS-----SNRSKSKAS-SRY----------------VPKSECNSYQSAVSPSMMGYVDEIAKYPENNEVIPPFLSNFEATMSNDKLEFDNSL----MNETDINEYLSEHVLDEELNSAIMGTELGSQYEPNE 402 + KLE LK+Y+ LY+L FC++W + VPMLIHV ++EC LF++P M YG +A CH++G+ L + + L L+V I QL + +P RS D+ E+ + ++ H + + ++ I A++T G+ TC +L REV+ ++ R+++ ++G +++ +RF ++ S +Y + R+ +G + I+CR +L D H ++K N +D G Y S+ + T R N LE+ +A WI V+W +++ + R +L+AR ++ S +GSEFG SN S K S SRY S+ S Q+ P GY + P N+ +P + + A N F + +E DI+E L + ++ N E + PNE Sbjct: 1 MAMKLETALKLYIVLYVLCFCLTWFVSVPMLIHVVPDNECLLFVSPFMNYGSSATCHIVGFAPLFVAVSALLLIVLHIIQLRSLRVFLSKPGPWRSADY-ERPPHIYWRMVIFHGLVTIGMIAITAILTAGYVDTCTNLYREVQSTLRGRYEVGKWGGAKGNNELYDRFANDHSIERYLSESRDPWGRSAAERSITCRSILTDFEIHYQLKLNHLKDPYNNAYIGPY--SEHERGLADIRHTTIRDNMILELCLAGCWISTVIWL-IIMLLMLLMRHHLRARLADESIWGSEFGESRRGGSRLSNHSFDKMSQSRYSQFSGSDMSGRRGRGTRGGSQAPSTQNGDVP---GYPIRVGPPPVNHHAVPTYSTATPAQQKNLLDYFTGNPNPKSEDEVDIDEALGDFQTQQDFNMEPQPDE----FMPNE 417
BLAST of EMLSAG00000000314 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold84_size396325-snap-gene-0.18 (protein:Tk09673 transcript:maker-scaffold84_size396325-snap-gene-0.18-mRNA-1 annotation:"eif2 kinase if2k-d (incomplete catalytic triad)") HSP 1 Score: 94.3597 bits (233), Expect = 3.417e-21 Identity = 69/251 (27.49%), Postives = 121/251 (48.21%), Query Frame = 0 Query: 28 LLIVPMLIHVHSNDECWLF---ITPRMEYGPNAVCHLIGYGSLVMGIINLALLVGFISQLYKFKKRKKQPRHMRSKDFIEKVVMFFSHLIKVHIVGNVLILVIVAVITIGFATTCQHLLREVRFFVQKRFDITQYGYQDRQDKVERFEDESSYRKYTNGQRNDYGSEYNMQHISCRRVLMDPINHLKIKRNQDSSQRIVYGVYDGSDEYTDRGSLGSNTYRGNTTLEMSIAVSWILFVLWTGLLIFMFYKR 275 L + M+IHV EC L+ I ++ YG A C+++ Y +V+ I+ AL+ ++L K + H S + +K+ + +I +H +G VL L + + TIG+ C +L + V + + Y + + + R+ED+ + +YTN N +GSE+ I+CR +L DP H K+ + Q YG + G D +T + N +E ++A W+ F+ W G + M +R Sbjct: 26 LASISMIIHVTPQSECLLYSYQIQAKLSYGHYATCNVVAYMFVVVVIMAGALMALVFNELRKLRS------HHPSYEVEQKIPV---KIISLHFMGMVLALFLTLLTTIGYVVACNNLQEGINSSVLNKLNSDPYATRGEEIQT-RYEDDYKFHRYTNRYGNAFGSEFYSIKITCRSILTDPEIHQKLHDHHYEQQSRYYGYWYGQDLFTFNSQ--EEASKTNALMESTMAGGWLCFIFWLGGFVLMVIQR 264 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000314 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000314 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000314 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000314 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000314 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000314 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000314 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1046:61706..63705+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000314-683080 ID=EMLSAG00000000314-683080|Name=EMLSAG00000000314|organism=Lepeophtheirus salmonis|type=gene|length=2000bp|location=Sequence derived from alignment at LSalAtl2s1046:61706..63705+ (Lepeophtheirus salmonis)back to top Add to Basket
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