EMLSAG00000000590, EMLSAG00000000590-683356 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000590 vs. GO
Match: - (symbol:tam "trans-aconitate 2-methyltransferase" species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol" evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0030798 "trans-aconitate 2-methyltransferase activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR023149 InterPro:IPR023506 GO:GO:0005829 EMBL:U00096 EMBL:AP009048 PIR:B64906 RefSeq:NP_416036.1 RefSeq:YP_489782.1 ProteinModelPortal:P76145 SMR:P76145 IntAct:P76145 STRING:511145.b1519 PRIDE:P76145 EnsemblBacteria:AAC74592 EnsemblBacteria:BAE76459 GeneID:12931225 GeneID:946074 KEGG:ecj:Y75_p1494 KEGG:eco:b1519 PATRIC:32118334 EchoBASE:EB3573 EcoGene:EG13812 eggNOG:COG4106 HOGENOM:HOG000125295 KO:K00598 OMA:AWETTYL OrthoDB:EOG6716PV ProtClustDB:PRK01683 BioCyc:EcoCyc:G6806-MONOMER BioCyc:ECOL316407:JW1512-MONOMER BioCyc:MetaCyc:G6806-MONOMER PRO:PR:P76145 Genevestigator:P76145 GO:GO:0030798 Gene3D:1.10.150.290 HAMAP:MF_00560 Uniprot:P76145) HSP 1 Score: 48.1358 bits (113), Expect = 2.876e-5 Identity = 33/101 (32.67%), Postives = 49/101 (48.51%), Query Frame = 0 Query: 25 VLEIGHGNGDLTRCLYHRFPNIHITGVDLNNKLGSSESLYSDRLHFVYGQDIXTWSGPKDPLDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIP 125 V ++G G G+ T L R+P ITG+D + + + FV DI W P LD+I SL ++PD +L L +NP+G + VQ+P Sbjct: 35 VADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEA-DIRNWQ-PVQALDLIFANASLQWLPDHYELFPHLVSLLNPQG--VLAVQMP 131
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592754770|gb|GAXK01199643.1| (TSA: Calanus finmarchicus comp180209_c0_seq1 transcribed RNA sequence) HSP 1 Score: 80.4925 bits (197), Expect = 4.067e-17 Identity = 69/249 (27.71%), Postives = 112/249 (44.98%), Query Frame = 0 Query: 25 VLEIGHGNGDLTRCLYHRFPNIHITG-----VDLNNKLGSSESLYSDRLHFVYGQDIXTWSGPKDPLDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPLF---------RIPLFHEEFVSFVNETFAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLSLEQYHLVRSFLDRKGRKELNIALRTFQSSVLKYYDHEFEDLWFEDVILDTVIDLFVEVYS 259 VL+IG GNG T L F + V+ KL + + L + + +D+ T K ++++ SLHFIPD+ K ++ M G F+ V PLF + L E +F F EL YW NF++YC P R++K + +G + + + +I L+ L +++ +V +F+ + G +E + F + D E DL+FEDVIL +VEV + Sbjct: 1 VLDIGCGNGKFTMELATVFEEVFAIDSSKEVVEKVRKLANHKKLSNITFMQLDAKDLHTLGDNK--FNVMIARNSLHFIPDILKFYDDIKFLMRSHGI-FLKVSNPLFDLVFPDDTFKSSLVDAELKNFTETKFKSELEEYWQTYVKENFVKYCDPFRTHKEVFVGEMQE--FELKTSREIHLLELKDHMKEITVVNNFILKHGIEEFESIYQEFLKNTSFLLDIEPCDLYFEDVILLRKDIFYVEVQA 732
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592831407|gb|GAXK01126137.1| (TSA: Calanus finmarchicus comp3726484_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 2.298e+0 Identity = 19/46 (41.30%), Postives = 26/46 (56.52%), Query Frame = 0 Query: 81 GPKDPLDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPL 126 G K PL I VR LHF P+V + + L + WM K +N ++PL Sbjct: 323 GMKAPLSSIKMVR-LHFHPEVPETVMLDKCWMKLKPSLKMNAELPL 457
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592834103|gb|GAXK01123441.1| (TSA: Calanus finmarchicus comp998215_c0_seq2 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 2.538e+0 Identity = 19/78 (24.36%), Postives = 37/78 (47.44%), Query Frame = 0 Query: 86 LDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPLFRIPLFH-EEFVSFVNETFAE---ELRGYWSQESGIN 159 D+I C LH +PD Q + +L + +GG + V R ++ ++ + +VNE + E++ W+ + N Sbjct: 540 FDLIQCSGVLHHLPDPQLGLNILSRSLADEGGMAIMVYAKTARTGIYQIQQLLRYVNEGIVDKETEIQNMWTMLNSFN 773
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592834104|gb|GAXK01123440.1| (TSA: Calanus finmarchicus comp998215_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 2.721e+0 Identity = 19/78 (24.36%), Postives = 37/78 (47.44%), Query Frame = 0 Query: 86 LDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPLFRIPLFH-EEFVSFVNETFAE---ELRGYWSQESGIN 159 D+I C LH +PD Q + +L + +GG + V R ++ ++ + +VNE + E++ W+ + N Sbjct: 632 FDLIQCSGVLHHLPDPQLGLNILSRSLADEGGMAIMVYAKTARTGIYQIQQLLRYVNEGIVDKETEIQNMWTMLNSFN 865
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592906253|gb|GAXK01052122.1| (TSA: Calanus finmarchicus comp28119_c1_seq9 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 7.671e+0 Identity = 17/56 (30.36%), Postives = 25/56 (44.64%), Query Frame = 0 Query: 144 FAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLS 199 F L YWS+ CC SNK L++ S+ I + K S+I D++ Sbjct: 210 FGNCLWRYWSKPKDA-----CCVCNSNKDLVIKSVEHRALQIEFKDKFSVIFFDVT 362
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592906264|gb|GAXK01052111.1| (TSA: Calanus finmarchicus comp28119_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.139e+0 Identity = 17/56 (30.36%), Postives = 25/56 (44.64%), Query Frame = 0 Query: 144 FAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLS 199 F L YWS+ CC SNK L++ S+ I + K S+I D++ Sbjct: 450 FGNCLWRYWSKPKDA-----CCVCNSNKDLVIKSVEHRALQIEFKDKFSVIFFDVT 602
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592906255|gb|GAXK01052120.1| (TSA: Calanus finmarchicus comp28119_c1_seq7 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.215e+0 Identity = 17/56 (30.36%), Postives = 25/56 (44.64%), Query Frame = 0 Query: 144 FAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLS 199 F L YWS+ CC SNK L++ S+ I + K S+I D++ Sbjct: 342 FGNCLWRYWSKPKDA-----CCVCNSNKDLVIKSVEHRALQIEFKDKFSVIFFDVT 494
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592794464|gb|GAXK01160104.1| (TSA: Calanus finmarchicus comp143165_c4_seq22 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 8.788e+0 Identity = 19/57 (33.33%), Postives = 32/57 (56.14%), Query Frame = 0 Query: 157 GINFIQYCCPSR-SNKSLLLGSLPKEVNSISIESKISLIHLDLSLEQYHLVRSFLDR 212 +N+ Q CPSR +++ S + + I +ESK+S +HL SL +H+V + R Sbjct: 434 AVNWSQLSCPSRFETGNIVQKSFARIIFFIDVESKVS*VHLRNSL--HHVVYNLWKR 598
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592906256|gb|GAXK01052119.1| (TSA: Calanus finmarchicus comp28119_c1_seq6 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.805e+0 Identity = 17/56 (30.36%), Postives = 25/56 (44.64%), Query Frame = 0 Query: 144 FAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLS 199 F L YWS+ CC SNK L++ S+ I + K S+I D++ Sbjct: 546 FGNCLWRYWSKPKDA-----CCVCNSNKDLVIKSVEHRALQIEFKDKFSVIFFDVT 698
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Match: gi|592906257|gb|GAXK01052118.1| (TSA: Calanus finmarchicus comp28119_c1_seq5 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 9.067e+0 Identity = 17/56 (30.36%), Postives = 25/56 (44.64%), Query Frame = 0 Query: 144 FAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLS 199 F L YWS+ CC SNK L++ S+ I + K S+I D++ Sbjct: 669 FGNCLWRYWSKPKDA-----CCVCNSNKDLVIKSVEHRALQIEFKDKFSVIFFDVT 821
BLAST of EMLSAG00000000590 vs. L. salmonis peptides
Match: EMLSAP00000000590 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:305287:306138:-1 gene:EMLSAG00000000590 transcript:EMLSAT00000000590 description:"maker-LSalAtl2s109-augustus-gene-3.27") HSP 1 Score: 530.406 bits (1365), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MNEEVTESVATLLEPYLHNKDRLNVLEIGHGNGDLTRCLYHRFPNIHITGVDLNNKLGSSESLYSDRLHFVYGQDIXTWSGPKDPLDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPLFRIPLFHEEFVSFVNETFAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLSLEQYHLVRSFLDRKGRKELNIALRTFQSSVLKYYDHEFEDLWFEDVILDTVIDLFVEVYSLL 261 MNEEVTESVATLLEPYLHNKDRLNVLEIGHGNGDLTRCLYHRFPNIHITGVDLNNKLGSSESLYSDRLHFVYGQDIXTWSGPKDPLDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPLFRIPLFHEEFVSFVNETFAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLSLEQYHLVRSFLDRKGRKELNIALRTFQSSVLKYYDHEFEDLWFEDVILDTVIDLFVEVYSLL Sbjct: 1 MNEEVTESVATLLEPYLHNKDRLNVLEIGHGNGDLTRCLYHRFPNIHITGVDLNNKLGSSESLYSDRLHFVYGQDIXTWSGPKDPLDIILCVRSLHFIPDVQKLMRLLRLWMNPKGGHFVNVQIPLFRIPLFHEEFVSFVNETFAEELRGYWSQESGINFIQYCCPSRSNKSLLLGSLPKEVNSISIESKISLIHLDLSLEQYHLVRSFLDRKGRKELNIALRTFQSSVLKYYDHEFEDLWFEDVILDTVIDLFVEVYSLL 261 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000590 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000000590 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 15
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BLAST of EMLSAG00000000590 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000590 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000590 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000590 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000590 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:305287..306138- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000590-683356 ID=EMLSAG00000000590-683356|Name=EMLSAG00000000590|organism=Lepeophtheirus salmonis|type=gene|length=852bp|location=Sequence derived from alignment at LSalAtl2s109:305287..306138- (Lepeophtheirus salmonis)back to top Add to Basket
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