EMLSAG00000001062, EMLSAG00000001062-683828 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001062
Unique NameEMLSAG00000001062-683828
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:slc19a3a "solute carrier family 19, member 3a" species:7955 "Danio rerio" [GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR002666 Pfam:PF01770 PIRSF:PIRSF028739 ZFIN:ZDB-GENE-110411-41 GO:GO:0016020 GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GeneTree:ENSGT00510000046382 OrthoDB:EOG76739R TIGRFAMs:TIGR00806 TreeFam:TF313684 KO:K14610 EMBL:CR354553 EMBL:CT476816 RefSeq:XP_686091.3 Ensembl:ENSDART00000059204 GeneID:557854 KEGG:dre:557854 OMA:WWAMATC NextBio:20882195 Uniprot:E7F6V3)

HSP 1 Score: 47.3654 bits (111), Expect = 3.476e-6
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            MQF YGV +S +VAYFTYIY+ V+  HY   TS  R A L
Sbjct:  108 MQFTYGVVTSCDVAYFTYIYSMVEIKHYLKATSYCRTAHL 147
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:SLC19A2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015403 "thiamine uptake transmembrane transporter activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 GO:GO:0016021 GO:GO:0005886 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GeneTree:ENSGT00510000046382 OrthoDB:EOG76739R TreeFam:TF313684 CTD:10560 KO:K14610 OMA:CGYFQVI GO:GO:0015403 GO:GO:0071934 EMBL:DAAA02042849 RefSeq:NP_001192939.1 UniGene:Bt.21269 Ensembl:ENSBTAT00000027006 GeneID:532860 KEGG:bta:532860 NextBio:20875826 Uniprot:E1BLU2)

HSP 1 Score: 46.595 bits (109), Expect = 5.229e-6
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG+A++TE+AY++YIY+ VD S YQ VTS  R A L
Sbjct:  126 LEFFYGIATATEIAYYSYIYSVVDLSMYQKVTSYCRSATL 165
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:LOC100155620 "Feline leukemia virus subgroup A receptor" species:9823 "Sus scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015403 "thiamine uptake transmembrane transporter activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 GO:GO:0016021 GO:GO:0005886 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 eggNOG:NOG241030 GeneTree:ENSGT00510000046382 HOGENOM:HOG000001583 OrthoDB:EOG76739R TIGRFAMs:TIGR00806 HOVERGEN:HBG054198 TreeFam:TF313684 KO:K14610 OMA:CGYFQVI GO:GO:0015403 GO:GO:0071934 EMBL:CU179726 EMBL:FJ436994 RefSeq:NP_001136139.1 UniGene:Ssc.22020 STRING:9823.ENSSSCP00000006706 Ensembl:ENSSSCT00000006894 GeneID:100155620 KEGG:ssc:100155620 Uniprot:B7U654)

HSP 1 Score: 46.595 bits (109), Expect = 5.430e-6
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG+A++TE+AY++YIY+ VD S YQ VTS  R A L
Sbjct:  127 LEFFYGIATATEIAYYSYIYSVVDLSMYQKVTSYCRSATL 166
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:folt-1 "Folate transporter 1" species:6239 "Caenorhabditis elegans" [GO:0005542 "folic acid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002666 Pfam:PF01770 PIRSF:PIRSF028739 GO:GO:0016021 GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GO:GO:0005542 EMBL:EF409995 EMBL:Z75526 EMBL:CB397828 PIR:T19024 RefSeq:NP_505833.3 UniGene:Cel.4863 ProteinModelPortal:Q17766 TCDB:2.A.48.2.2 EnsemblMetazoa:C06H2.4 GeneID:179544 KEGG:cel:CELE_C06H2.4 UCSC:C06H2.4 CTD:179544 WormBase:C06H2.4 eggNOG:NOG241030 GeneTree:ENSGT00510000046382 HOGENOM:HOG000001583 InParanoid:Q17766 OrthoDB:EOG76739R NextBio:905868 TIGRFAMs:TIGR00806 Uniprot:Q17766)

HSP 1 Score: 46.2098 bits (108), Expect = 6.214e-6
Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQ ++GVAS+ E+AY++YIY+ VD  HY+  TS  R A L  + +
Sbjct:  100 MQVSFGVASAAEIAYYSYIYSIVDRKHYKRATSYIRAAALMGKLV 144
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:SLC19A2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015403 "thiamine uptake transmembrane transporter activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 GO:GO:0016021 GO:GO:0005886 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GeneTree:ENSGT00510000046382 OrthoDB:EOG76739R TIGRFAMs:TIGR00806 TreeFam:TF313684 OMA:CGYFQVI GO:GO:0015403 GO:GO:0071934 EMBL:AAEX03005219 Ensembl:ENSCAFT00000024176 Uniprot:F1PN66)

HSP 1 Score: 45.8246 bits (107), Expect = 1.093e-5
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG+A++TE+AY++YIY+ VD + YQ VTS  R A L
Sbjct:  127 LEFFYGIATATEIAYYSYIYSVVDLNMYQKVTSYCRSATL 166
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:CG17036 species:7227 "Drosophila melanogaster" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0008518 "reduced folate carrier activity" evidence=ISS] [GO:0006810 "transport" evidence=IEA] InterPro:IPR002666 Pfam:PF01770 PIRSF:PIRSF028739 GO:GO:0016020 EMBL:AE014134 GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GeneTree:ENSGT00510000046382 OrthoDB:EOG76739R TIGRFAMs:TIGR00806 KO:K14610 OMA:CGYFQVI RefSeq:NP_609584.1 UniGene:Dm.18082 ProteinModelPortal:Q9VK64 SMR:Q9VK64 PRIDE:Q9VK64 EnsemblMetazoa:FBtr0080408 GeneID:34679 KEGG:dme:Dmel_CG17036 UCSC:CG17036-RA FlyBase:FBgn0032449 InParanoid:Q9VK64 PhylomeDB:Q9VK64 GenomeRNAi:34679 NextBio:789654 Bgee:Q9VK64 Uniprot:Q9VK64)

HSP 1 Score: 45.4394 bits (106), Expect = 1.305e-5
Identity = 19/44 (43.18%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    2 QFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            Q  +G  ++ EVAY+TY+YA+V+   YQ+VT  TR A+L  +++
Sbjct:  102 QVFFGTFTAAEVAYYTYMYAKVNKEQYQVVTGHTRAAILSGKFL 145
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:folt-2 "Folate-like transporter 2" species:6239 "Caenorhabditis elegans" [GO:0005542 "folic acid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 GO:GO:0016021 GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GO:GO:0005542 eggNOG:NOG241030 GeneTree:ENSGT00510000046382 HOGENOM:HOG000001583 OrthoDB:EOG76739R TIGRFAMs:TIGR00806 EMBL:FO080739 PIR:A88979 RefSeq:NP_503780.1 UniGene:Cel.33016 ProteinModelPortal:O45166 BioGrid:43802 DIP:DIP-25852N MINT:MINT-1106219 STRING:6239.F37B4.7 PaxDb:O45166 PRIDE:O45166 EnsemblMetazoa:F37B4.7 GeneID:178745 KEGG:cel:CELE_F37B4.7 UCSC:F37B4.7 CTD:178745 WormBase:F37B4.7 InParanoid:O45166 OMA:IFYRVIY NextBio:902380 Uniprot:O45166)

HSP 1 Score: 45.4394 bits (106), Expect = 1.444e-5
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++  YG A++TE+AYF YIY +V  + Y+  T+ TR ALL  R++
Sbjct:   99 LEVFYGWATATEIAYFAYIYVKVPKTEYKSATAFTRAALLVGRFL 143
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:SLC19A2 "Thiamine transporter 1" species:9606 "Homo sapiens" [GO:0005886 "plasma membrane" evidence=TAS] [GO:0006766 "vitamin metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS] [GO:0008517 "folic acid transporter activity" evidence=NAS] [GO:0015234 "thiamine transmembrane transporter activity" evidence=TAS] [GO:0015403 "thiamine uptake transmembrane transporter activity" evidence=ISS] [GO:0015884 "folic acid transport" evidence=NAS] [GO:0015888 "thiamine transport" evidence=NAS] [GO:0016021 "integral component of membrane" evidence=NAS] [GO:0042723 "thiamine-containing compound metabolic process" evidence=TAS] [GO:0044281 "small molecule metabolic process" evidence=TAS] [GO:0071934 "thiamine transmembrane transport" evidence=ISS;TAS] Reactome:REACT_111217 InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 GO:GO:0016021 GO:GO:0005886 Reactome:REACT_116125 EMBL:CH471067 GO:GO:0008517 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 EMBL:AL021068 eggNOG:NOG241030 GO:GO:0042723 HOVERGEN:HBG054198 TreeFam:TF313684 EMBL:AF160812 EMBL:AJ238413 EMBL:AJ237724 EMBL:AF135488 EMBL:AF158233 EMBL:AF160186 EMBL:AF160756 EMBL:AF153330 EMBL:AF272359 EMBL:AK304021 EMBL:AK313779 EMBL:AK316465 EMBL:BC018514 RefSeq:NP_008927.1 RefSeq:XP_005244897.1 UniGene:Hs.30246 ProteinModelPortal:O60779 BioGrid:115811 IntAct:O60779 STRING:9606.ENSP00000236137 BindingDB:O60779 ChEMBL:CHEMBL3079 GuidetoPHARMACOLOGY:1015 TCDB:2.A.48.2.1 PhosphoSite:O60779 PaxDb:O60779 PRIDE:O60779 Ensembl:ENST00000236137 Ensembl:ENST00000367804 GeneID:10560 KEGG:hsa:10560 UCSC:uc001gge.4 UCSC:uc001ggf.4 CTD:10560 GeneCards:GC01M169433 HGNC:HGNC:10938 HPA:HPA006119 HPA:HPA016599 MIM:249270 MIM:603941 neXtProt:NX_O60779 Orphanet:49827 PharmGKB:PA35825 InParanoid:O60779 KO:K14610 OMA:CGYFQVI PhylomeDB:O60779 SABIO-RK:O60779 ChiTaRS:SLC19A2 GeneWiki:SLC19A2 GenomeRNAi:10560 NextBio:40077 PRO:PR:O60779 ArrayExpress:O60779 Bgee:O60779 CleanEx:HS_SLC19A2 Genevestigator:O60779 GO:GO:0015403 Uniprot:O60779)

HSP 1 Score: 45.0542 bits (105), Expect = 1.675e-5
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG+A++TE+AY++YIY+ VD   YQ VTS  R A L
Sbjct:  127 LEFFYGIATATEIAYYSYIYSVVDLGMYQKVTSYCRSATL 166
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:Slc19a2 "Protein Slc19a2" species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015403 "thiamine uptake transmembrane transporter activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 RGD:1308611 GO:GO:0016021 GO:GO:0005886 InterPro:IPR016196 SUPFAM:SSF103473 PANTHER:PTHR10686 GeneTree:ENSGT00510000046382 OrthoDB:EOG76739R TreeFam:TF313684 OMA:CGYFQVI GO:GO:0015403 GO:GO:0071934 EMBL:AABR06075904 EMBL:AABR06075905 Ensembl:ENSRNOT00000003817 NextBio:35575769 PRO:PR:F1LNC9 ArrayExpress:F1LNC9 Uniprot:F1LNC9)

HSP 1 Score: 44.669 bits (104), Expect = 2.081e-5
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG+A++TE+AY++YIY  VD   YQ VTS  R A L
Sbjct:   86 LEFFYGIATATEIAYYSYIYTVVDLGMYQKVTSYCRSATL 125
[Close]
BLAST of EMLSAG00000001062 vs. GO
Match: - (symbol:Slc19a2 "solute carrier family 19 (thiamine transporter), member 2" species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND] [GO:0015234 "thiamine transmembrane transporter activity" evidence=ISO] [GO:0015403 "thiamine uptake transmembrane transporter activity" evidence=IEA;ISO] [GO:0015888 "thiamine transport" evidence=ISO] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0071934 "thiamine transmembrane transport" evidence=ISO] InterPro:IPR002666 InterPro:IPR028338 Pfam:PF01770 PIRSF:PIRSF028739 PIRSF:PIRSF500794 RGD:1308611 GO:GO:0016021 GO:GO:0005886 InterPro:IPR016196 SUPFAM:SSF103473 EMBL:CH473958 PANTHER:PTHR10686 eggNOG:NOG241030 HOGENOM:HOG000001583 HOVERGEN:HBG054198 CTD:10560 KO:K14610 GO:GO:0015403 GO:GO:0071934 EMBL:BC099811 RefSeq:NP_001025195.1 UniGene:Rn.19386 STRING:10116.ENSRNOP00000003817 GeneID:289175 KEGG:rno:289175 UCSC:RGD:1308611 NextBio:629321 Genevestigator:Q499Q0 Uniprot:Q499Q0)

HSP 1 Score: 45.0542 bits (105), Expect = 2.099e-5
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG+A++TE+AY++YIY  VD   YQ VTS  R A L
Sbjct:  127 LEFFYGIATATEIAYYSYIYTVVDLGMYQKVTSYCRSATL 166
[Close]
BLAST of EMLSAG00000001062 vs. C. finmarchicus
Match: gi|592955132|gb|GAXK01003421.1| (TSA: Calanus finmarchicus comp186723_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 60.8474 bits (146), Expect = 1.422e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQ +YG+A+STEVAYFTYIYAQV    YQ VTS TR ALL  R++
Sbjct:  365 MQVSYGIATSTEVAYFTYIYAQVPGEFYQQVTSFTRSALLLGRFL 499

HSP 2 Score: 52.373 bits (124), Expect = 1.238e-8
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:   37 VALLHDRYILKWSIWWSIGMVGNFQVGIYIQPL 69
            V+   + YILKWSIWW++ M GNFQVG YIQPL
Sbjct:  761 VSSFSNIYILKWSIWWALAMCGNFQVGNYIQPL 859
[Close]
BLAST of EMLSAG00000001062 vs. L. salmonis peptides
Match: EMLSAP00000001062 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1176:67768:68264:1 gene:EMLSAG00000001062 transcript:EMLSAT00000001062 description:"snap_masked-LSalAtl2s1176-processed-gene-0.1")

HSP 1 Score: 140.969 bits (354), Expect = 4.352e-45
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYILKWSIWWSIGMVGNFQVGIYIQPL 69
            MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYILKWSIWWSIGMVGNFQVGIYIQPL
Sbjct:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYILKWSIWWSIGMVGNFQVGIYIQPL 69
[Close]
BLAST of EMLSAG00000001062 vs. L. salmonis peptides
Match: EMLSAP00000000134 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:151056:153356:-1 gene:EMLSAG00000000134 transcript:EMLSAT00000000134 description:"maker-LSalAtl2s1021-snap-gene-0.45")

HSP 1 Score: 79.337 bits (194), Expect = 1.996e-19
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYILKWSIWWSIGMVGNFQV 62
            MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTS TRVALL  R+          G++G F V
Sbjct:  108 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSFTRVALLVGRF--------CSGILGQFLV 161

HSP 2 Score: 58.151 bits (139), Expect = 1.149e-11
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:   37 VALLHDRYILKWSIWWSIGMVGNFQVGIYIQPL 69
            VA   + YILKWSIWWSIGM GNFQVG YIQPL
Sbjct:  226 VAAFGNPYILKWSIWWSIGMAGNFQVGNYIQPL 258
[Close]
BLAST of EMLSAG00000001062 vs. L. salmonis peptides
Match: EMLSAP00000011734 (pep:novel supercontig:LSalAtl2s:LSalAtl2s816:133076:134387:-1 gene:EMLSAG00000011734 transcript:EMLSAT00000011734 description:"maker-LSalAtl2s816-augustus-gene-1.4")

HSP 1 Score: 78.9518 bits (193), Expect = 4.244e-19
Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYILKWSIWWSIGMVGNFQV 62
            MQFAYG+ASSTEVAYFTYIYAQVDSSHYQIVTS TRVALL  R+          G++G F V
Sbjct:  103 MQFAYGIASSTEVAYFTYIYAQVDSSHYQIVTSFTRVALLVGRF--------CSGILGQFLV 156

HSP 2 Score: 58.151 bits (139), Expect = 1.345e-11
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:   37 VALLHDRYILKWSIWWSIGMVGNFQVGIYIQPL 69
            VA   + YILKWSIWWSIGM GNFQVG YIQPL
Sbjct:  221 VAAFGNPYILKWSIWWSIGMAGNFQVGBYIQPL 253
[Close]
BLAST of EMLSAG00000001062 vs. L. salmonis peptides
Match: EMLSAP00000002648 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1535:42263:43386:-1 gene:EMLSAG00000002648 transcript:EMLSAT00000002648 description:"maker-LSalAtl2s1535-snap-gene-0.9")

HSP 1 Score: 73.9442 bits (180), Expect = 1.171e-17
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRY 44
            MQFAYGVASSTEVAYFTYIYAQVDSS+ QIVTS TRVALL  R+
Sbjct:  103 MQFAYGVASSTEVAYFTYIYAQVDSSNDQIVTSFTRVALLIGRF 146
[Close]
BLAST of EMLSAG00000001062 vs. L. salmonis peptides
Match: EMLSAP00000008542 (pep:novel supercontig:LSalAtl2s:LSalAtl2s527:14020:14865:-1 gene:EMLSAG00000008542 transcript:EMLSAT00000008542 description:"snap_masked-LSalAtl2s527-processed-gene-0.9")

HSP 1 Score: 64.3142 bits (155), Expect = 1.579e-14
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTR 36
            MQFAYGVASSTEVAYFTYIYAQVDSSHYQI  S  R
Sbjct:  112 MQFAYGVASSTEVAYFTYIYAQVDSSHYQISGSSCR 147
[Close]
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Match: XP_006562424.1 (PREDICTED: thiamine transporter 2-like [Apis mellifera])

HSP 1 Score: 53.1434 bits (126), Expect = 3.077e-9
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDR 43
            ++F YG+  STEVAY+TYIYA+VD  HYQ VTS T+ A L  R
Sbjct:  100 LEFFYGLFFSTEVAYYTYIYAKVDKKHYQEVTSHTKAASLFGR 142
[Close]
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Match: gb|EFA04966.1| (Thiamine transporter 1-like Protein [Tribolium castaneum])

HSP 1 Score: 51.2174 bits (121), Expect = 1.267e-8
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++  YG+  ++EVAY+TYIYA+VD  HYQ VTS TR A+L  R I
Sbjct:  101 LEVIYGMFCASEVAYYTYIYAKVDKEHYQKVTSHTRGAILAGRAI 145
[Close]
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Match: EGK96680.1 (AGAP012955-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 49.2914 bits (116), Expect = 6.993e-8
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRY 44
            ++  YG   + EVAYF+YIYA+VD  HYQ VTS TR A+   R+
Sbjct:  101 LEIFYGTYCAAEVAYFSYIYAKVDREHYQKVTSHTRAAIYSGRF 144
[Close]
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Match: EFX72463.1 (hypothetical protein DAPPUDRAFT_59074 [Daphnia pulex])

HSP 1 Score: 48.1358 bits (113), Expect = 1.780e-7
Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++F Y  A++T++AY TYIYAQV  S +Q+VT+ T+ ALL  R I
Sbjct:  101 VEFLYAAATATQIAYNTYIYAQVPLSKFQVVTAYTQAALLTGRCI 145
[Close]
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Match: EEB09906.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 48.1358 bits (113), Expect = 1.895e-7
Identity = 20/39 (51.28%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    2 QFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            QF YG+ S+TEVAY++Y+YA++D +HYQ  TS+ +  +L
Sbjct:  105 QFFYGLFSATEVAYYSYLYAKLDKAHYQRATSLAKAVIL 143
[Close]
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Match: EEB17937.1 (Thiamine transporter, putative [Pediculus humanus corporis])

HSP 1 Score: 48.1358 bits (113), Expect = 1.947e-7
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALL 40
            ++F YG   ++EVAYFTY+YA+VD  HYQ VT  +R A+L
Sbjct:   99 VEFFYGFFMASEVAYFTYMYAKVDKVHYQKVTGYSRAAIL 138
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|919047875|ref|XP_013407120.1| (PREDICTED: thiamine transporter 1-like [Lingula anatina])

HSP 1 Score: 58.9214 bits (141), Expect = 1.366e-8
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQF YG+A++TE+AY++YIYA V+  HYQ VTS TR A+L  R+I
Sbjct:  102 MQFLYGLATATEIAYYSYIYAAVEKDHYQRVTSYTRAAVLLGRFI 146
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|443702095|gb|ELU00256.1| (hypothetical protein CAPTEDRAFT_184223 [Capitella teleta])

HSP 1 Score: 58.151 bits (139), Expect = 2.684e-8
Identity = 24/45 (53.33%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQ AYG+A++TE+AY++YIY+ VD  H+Q+VTS+TR   L  R++
Sbjct:  107 MQLAYGIATATEIAYYSYIYSVVDEEHFQVVTSLTRGCALVGRFV 151
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|1067100105|ref|XP_018012139.1| (PREDICTED: thiamine transporter 1-like [Hyalella azteca])

HSP 1 Score: 57.3806 bits (137), Expect = 5.300e-8
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI--LKWSIWWSIGMV 57
            M+F YG+ S+TEVAY+TY+YAQV   +YQ V+S TR A+L  R+   L   I +S G++
Sbjct:  101 MEFCYGIVSATEVAYYTYMYAQVSGRYYQRVSSFTRTAVLFGRFCAGLLGQILYSTGLM 159
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|1005425992|ref|XP_015749628.1| (PREDICTED: thiamine transporter 2-like [Acropora digitifera])

HSP 1 Score: 56.6102 bits (135), Expect = 1.032e-7
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQ  YGVA+  EVAY++YIYA VD  HYQ+VTS TR A+L  R I
Sbjct:  101 MQVVYGVATGAEVAYYSYIYAVVDRDHYQLVTSYTRAAVLVGRMI 145
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|1061478643|gb|ODM96230.1| (Thiamine transporter 1 [Orchesella cincta])

HSP 1 Score: 55.4546 bits (132), Expect = 1.282e-7
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++  YG ASSTEVAY+TYIYA+VD  HYQ VTS T  A+L  R++
Sbjct:   67 VELLYGTASSTEVAYYTYIYAKVDRDHYQKVTSYTYSAILAGRFM 111
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|752867338|ref|XP_011250692.1| (PREDICTED: thiamine transporter 2 [Camponotus floridanus] >gi|307186649|gb|EFN72132.1| Thiamine transporter 2 [Camponotus floridanus])

HSP 1 Score: 55.8398 bits (133), Expect = 1.685e-7
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDR 43
            ++F YG+  STEVAY+TYIYA+VD SHYQ VTS T+ A+L  R
Sbjct:   99 LEFFYGLYLSTEVAYYTYIYAKVDKSHYQEVTSHTKAAILFGR 141
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|156541678|ref|XP_001602920.1| (PREDICTED: thiamine transporter 2-like [Nasonia vitripennis])

HSP 1 Score: 55.0694 bits (131), Expect = 3.375e-7
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRY 44
            ++F YG+  STEVAY+TYIYA+VD  HYQ VTS TR A L  R+
Sbjct:  100 VEFLYGLLLSTEVAYYTYIYAKVDKQHYQKVTSHTRGAFLLGRF 143
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|1000730877|ref|XP_015587819.1| (PREDICTED: thiamine transporter 1-like isoform X1 [Cephus cinctus] >gi|1000730879|ref|XP_015587821.1| PREDICTED: thiamine transporter 1-like isoform X1 [Cephus cinctus])

HSP 1 Score: 55.0694 bits (131), Expect = 3.410e-7
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++F YG+  STEVAY+TYIYA+VD  HYQ VT  TR A L  R++
Sbjct:  100 LEFFYGIFLSTEVAYYTYIYAKVDKEHYQEVTGHTRSAFLLGRFL 144
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|1000730881|ref|XP_015587822.1| (PREDICTED: thiamine transporter 1-like isoform X2 [Cephus cinctus])

HSP 1 Score: 54.6842 bits (130), Expect = 3.824e-7
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++F YG+  STEVAY+TYIYA+VD  HYQ VT  TR A L  R++
Sbjct:   14 LEFFYGIFLSTEVAYYTYIYAKVDKEHYQEVTGHTRSAFLLGRFL 58
[Close]
BLAST of EMLSAG00000001062 vs. nr
Match: gi|939651436|ref|XP_014296418.1| (PREDICTED: thiamine transporter 2-like [Microplitis demolitor])

HSP 1 Score: 54.299 bits (129), Expect = 5.226e-7
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            ++F YG   S EVAY+TYIYA+VD  HYQ V+S TR ALL  R+I
Sbjct:  100 VEFFYGFYISAEVAYYTYIYAKVDKQHYQSVSSYTRSALLFGRFI 144
[Close]
BLAST of EMLSAG00000001062 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold431_size173393-snap-gene-0.28 (protein:Tk07313 transcript:maker-scaffold431_size173393-snap-gene-0.28-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_59074")

HSP 1 Score: 65.0846 bits (157), Expect = 1.266e-14
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQF YGVA+STEVAY+TYIYA+V+  H+Q VTS TRVALL  R++
Sbjct:  102 MQFCYGVATSTEVAYYTYIYAKVEPRHFQKVTSWTRVALLVGRFL 146

HSP 2 Score: 54.299 bits (129), Expect = 7.948e-11
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0 
Query:   42 DRYILKWSIWWSIGMVGNFQVGIYIQPL 69
            + YILKWSIWW++GM GNFQVG YIQPL
Sbjct:  234 NPYILKWSIWWALGMCGNFQVGNYIQPL 261
[Close]
BLAST of EMLSAG00000001062 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1070_size64748-snap-gene-0.13 (protein:Tk03036 transcript:maker-scaffold1070_size64748-snap-gene-0.13-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_59074")

HSP 1 Score: 52.373 bits (124), Expect = 4.731e-10
Identity = 21/45 (46.67%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    1 MQFAYGVASSTEVAYFTYIYAQVDSSHYQIVTSVTRVALLHDRYI 45
            MQF YG+A++TE+AY+TYIYA+V    ++ V+S+TR ++L  +++
Sbjct:  104 MQFVYGMATATEIAYYTYIYAKVPQEDFKRVSSLTRFSVLMGKFV 148
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001062 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 23
Match NameE-valueIdentityDescription
-3.476e-657.50symbol:slc19a3a "solute carrier family 19, member ... [more]
-5.229e-655.00symbol:SLC19A2 "Uncharacterized protein" species:9... [more]
-5.430e-655.00symbol:LOC100155620 "Feline leukemia virus subgrou... [more]
-6.214e-646.67symbol:folt-1 "Folate transporter 1" species:6239 ... [more]
-1.093e-552.50symbol:SLC19A2 "Uncharacterized protein" species:9... [more]
-1.305e-543.18symbol:CG17036 species:7227 "Drosophila melanogast... [more]
-1.444e-544.44symbol:folt-2 "Folate-like transporter 2" species:... [more]
-1.675e-552.50symbol:SLC19A2 "Thiamine transporter 1" species:96... [more]
-2.081e-552.50symbol:Slc19a2 "Protein Slc19a2" species:10116 "Ra... [more]
-2.099e-552.50symbol:Slc19a2 "solute carrier family 19 (thiamine... [more]

Pages

back to top
BLAST of EMLSAG00000001062 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592955132|gb|GAXK01003421.1|1.422e-1166.67TSA: Calanus finmarchicus comp186723_c0_seq1 trans... [more]
back to top
BLAST of EMLSAG00000001062 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000010624.352e-45100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1176:6776... [more]
EMLSAP000000001341.996e-1970.97pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:1510... [more]
EMLSAP000000117344.244e-1969.35pep:novel supercontig:LSalAtl2s:LSalAtl2s816:13307... [more]
EMLSAP000000026481.171e-1786.36pep:novel supercontig:LSalAtl2s:LSalAtl2s1535:4226... [more]
EMLSAP000000085421.579e-1488.89pep:novel supercontig:LSalAtl2s:LSalAtl2s527:14020... [more]
back to top
BLAST of EMLSAG00000001062 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000001062 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 6
Match NameE-valueIdentityDescription
XP_006562424.13.077e-960.47PREDICTED: thiamine transporter 2-like [Apis melli... [more]
gb|EFA04966.1|1.267e-855.56Thiamine transporter 1-like Protein [Tribolium cas... [more]
EGK96680.16.993e-852.27AGAP012955-PA [Anopheles gambiae str. PEST][more]
EFX72463.11.780e-751.11hypothetical protein DAPPUDRAFT_59074 [Daphnia pul... [more]
EEB09906.11.895e-751.28conserved hypothetical protein [Pediculus humanus ... [more]
EEB17937.11.947e-755.00Thiamine transporter, putative [Pediculus humanus ... [more]
back to top
BLAST of EMLSAG00000001062 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 16
Match NameE-valueIdentityDescription
gi|919047875|ref|XP_013407120.1|1.366e-860.00PREDICTED: thiamine transporter 1-like [Lingula an... [more]
gi|443702095|gb|ELU00256.1|2.684e-853.33hypothetical protein CAPTEDRAFT_184223 [Capitella ... [more]
gi|1067100105|ref|XP_018012139.1|5.300e-849.15PREDICTED: thiamine transporter 1-like [Hyalella a... [more]
gi|1005425992|ref|XP_015749628.1|1.032e-762.22PREDICTED: thiamine transporter 2-like [Acropora d... [more]
gi|1061478643|gb|ODM96230.1|1.282e-760.00Thiamine transporter 1 [Orchesella cincta][more]
gi|752867338|ref|XP_011250692.1|1.685e-762.79PREDICTED: thiamine transporter 2 [Camponotus flor... [more]
gi|156541678|ref|XP_001602920.1|3.375e-761.36PREDICTED: thiamine transporter 2-like [Nasonia vi... [more]
gi|1000730877|ref|XP_015587819.1|3.410e-757.78PREDICTED: thiamine transporter 1-like isoform X1 ... [more]
gi|1000730881|ref|XP_015587822.1|3.824e-757.78PREDICTED: thiamine transporter 1-like isoform X2 ... [more]
gi|939651436|ref|XP_014296418.1|5.226e-760.00PREDICTED: thiamine transporter 2-like [Micropliti... [more]

Pages

back to top
BLAST of EMLSAG00000001062 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold431_size173393-snap-gene-0.281.266e-1468.89protein:Tk07313 transcript:maker-scaffold431_size1... [more]
maker-scaffold1070_size64748-snap-gene-0.134.731e-1046.67protein:Tk03036 transcript:maker-scaffold1070_size... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1176supercontigLSalAtl2s1176:67768..68264 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s1176-processed-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001062 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001062EMLSAT00000001062-696909Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1176:67768..68264+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001062-683828 ID=EMLSAG00000001062-683828|Name=EMLSAG00000001062|organism=Lepeophtheirus salmonis|type=gene|length=497bp|location=Sequence derived from alignment at LSalAtl2s1176:67768..68264+ (Lepeophtheirus salmonis)
ATGCAGTTTGCCTATGGTGTTGCAAGCTCTACGGAAGTAGCGTACTTTAC
ATATATTTATGCTCAAGTCGATTCTTCTCATTATCAAATCGTTACTTCTG
TTACAAGAGTGGCTCTTCTTGTAGGCAGATTTTGTAGGGGMATTCTGGGA
CAGTTTCTTGTAATTATGGATCTCACAACATATCGAGGGTTTAATTATAT
TTCCCTTGTATCTGTGTCTCTATCAACTATTGTGAGTTTTTGCCTTCATA
AGGTCCAAACATCTTTGTACTTTCATCGGACATGAAATAATGAGAACCTA
GAAATTGGACAATGACATTAAAACATTTCAAAGGAGATGTTGTAGATGAA
TTTGGTTAAGTAAAATTATCTTAGTCATCGAATATTGAATTAAAATATAT
TTTTCAGCACGATAGATATATTTTGAAGTGGTCTATTTGGTGGTCCATTG
GAATGGTTGGTAATTTTCAAGTTGGGATTTATATTCAACCTCTATAG
back to top
Add to Basket