EMLSAG00000001219, EMLSAG00000001219-683985 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001219 vs. L. salmonis peptides
Match: EMLSAP00000001219 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:2555:3002:-1 gene:EMLSAG00000001219 transcript:EMLSAT00000001219 description:"maker-LSalAtl2s11-augustus-gene-0.13") HSP 1 Score: 257.684 bits (657), Expect = 3.601e-89 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query: 1 MKILMILGLLLGSTFASEYQHPLLPYPSPFYPSQSQFYASQQPFFRSNSHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDNHS 130
MKILMILGLLLGSTFASEYQHPLLPYPSPFYPSQSQFYASQQPFFRSNSHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDNHS
Sbjct: 1 MKILMILGLLLGSTFASEYQHPLLPYPSPFYPSQSQFYASQQPFFRSNSHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDNHS 130
BLAST of EMLSAG00000001219 vs. L. salmonis peptides
Match: EMLSAP00000000727 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1116:12706:13290:1 gene:EMLSAG00000000727 transcript:EMLSAT00000000727 description:"augustus_masked-LSalAtl2s1116-processed-gene-0.2") HSP 1 Score: 146.362 bits (368), Expect = 4.081e-45 Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0
Query: 1 MKILMILGLLLGSTFASEYQHPLLPYPSPFYPSQ----SQFYASQQPFFRSNSHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDN 128
MKILMILG LLGS+F S+YQHPL YPSP +P SQF+AS+QPF SNSHPV YPFP QTSTP PI+V TP+PVF++PDS+FNS RD FSS SNTG NF N+GQFGNNFLNGKVQSTS T +PSRF+N
Sbjct: 1 MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTGTNF-NKGQFGNNFLNGKVQSTSSTSSPSRFNN 131
BLAST of EMLSAG00000001219 vs. L. salmonis peptides
Match: EMLSAP00000001230 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:54372:55068:1 gene:EMLSAG00000001230 transcript:EMLSAT00000001230 description:"augustus_masked-LSalAtl2s11-processed-gene-0.1") HSP 1 Score: 129.413 bits (324), Expect = 2.730e-38 Identity = 92/158 (58.23%), Postives = 103/158 (65.19%), Query Frame = 0
Query: 1 MKILMILGLLLGSTFASEYQHPLLPYPSPFYPS----QSQFYASQQPFFRSN------------------------SHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDNHS 130
MKIL++LG LL S+ S Y+H L YPSPFYPS QS+FY S+ PF SN SHP LYP P QTSTP+PIIV TP+PVFVTPDSLFNSQR+TFSS S+ N GQFGNN LNGKV STSFT TPSRFDN+S
Sbjct: 1 MKILIVLGFLLDSSLGSGYRHHLNSYPSPFYPSHLTPQSEFYTSRHPFLHSNNHLMLHQFHQSNSHPVPQTFHHSNSHPFLYPVPIQTSTPKPIIVVTPVPVFVTPDSLFNSQRETFSSSSSNSGTNLNNGQFGNNLLNGKVHSTSFTPTPSRFDNNS 158
BLAST of EMLSAG00000001219 vs. L. salmonis peptides
Match: EMLSAP00000000728 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1116:7767:8695:1 gene:EMLSAG00000000728 transcript:EMLSAT00000000728 description:"maker-LSalAtl2s1116-snap-gene-0.9") HSP 1 Score: 121.709 bits (304), Expect = 5.526e-36 Identity = 75/105 (71.43%), Postives = 85/105 (80.95%), Query Frame = 0
Query: 1 MKILMILGLLLGSTFASEYQHPLLPYPSPFYP----SQSQFYASQQPFFRSNSHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNN 101
MKILMILG +LGS+F S+YQHPL YPSP +P S SQFYAS+Q F NSHPV YPFP QTSTP PI+V TP+PVF++PDS+FNSQRDTFSS S TGNNFNN
Sbjct: 1 MKILMILGFILGSSFGSQYQHPLHSYPSPVFPYHLGSPSQFYASRQQFHHFNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSQRDTFSSNSKTGNNFNN 105
BLAST of EMLSAG00000001219 vs. L. salmonis peptides
Match: EMLSAP00000001218 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:21782:22338:-1 gene:EMLSAG00000001218 transcript:EMLSAT00000001218 description:"maker-LSalAtl2s11-augustus-gene-0.14") HSP 1 Score: 115.161 bits (287), Expect = 6.461e-33 Identity = 73/133 (54.89%), Postives = 85/133 (63.91%), Query Frame = 0
Query: 19 YQHPLLPYPSPFYPS----QSQFYASQQPFFRSNSHPVLYPF----------------PTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSG-SNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDNHS 130
YQHPL YP PFYPS QS+FY S+ +SNS+PV + F P QTST PII+ATP+PVF+TP+SLFNSQRD FS G S+ G N QFGN+FL GKVQS S TRTP+R DN S
Sbjct: 19 YQHPLHSYPGPFYPSHFTPQSEFYTSRHLLPQSNSYPVPHQFHQSNSHPVPYPVPYPVPIQTSTSVPIIIATPVPVFITPNSLFNSQRDIFSKGSSDIGTNI-KSAQFGNSFLIGKVQSXSSTRTPTRLDNKS 150 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001219 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001219 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000001219 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000001219 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001219 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001219 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001219 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s11:2555..3002- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001219-683985 ID=EMLSAG00000001219-683985|Name=EMLSAG00000001219|organism=Lepeophtheirus salmonis|type=gene|length=448bp|location=Sequence derived from alignment at LSalAtl2s11:2555..3002- (Lepeophtheirus salmonis)back to top Add to Basket
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