EMLSAG00000001349, EMLSAG00000001349-684115 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001349 vs. C. finmarchicus
Match: gi|592949466|gb|GAXK01009087.1| (TSA: Calanus finmarchicus comp1413110_c0_seq3 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 7.407e+0 Identity = 20/61 (32.79%), Postives = 32/61 (52.46%), Query Frame = 0 Query: 11 FHRILSIKIV-EARKRGKYS-------LHLNECTDISKLAHVLVFVKYIDDNGAMLSRKKN 63 F R +S V + + RGK++ LHL D+SK++HV V+++ M +KKN Sbjct: 491 FSRQISQSSVYQLKDRGKFASEIMKRYLHLK--YDVSKVSHVTNLVQFVIQESMMSGQKKN 667
BLAST of EMLSAG00000001349 vs. C. finmarchicus
Match: gi|592949467|gb|GAXK01009086.1| (TSA: Calanus finmarchicus comp1413110_c0_seq2 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 7.543e+0 Identity = 20/61 (32.79%), Postives = 32/61 (52.46%), Query Frame = 0 Query: 11 FHRILSIKIV-EARKRGKYS-------LHLNECTDISKLAHVLVFVKYIDDNGAMLSRKKN 63 F R +S V + + RGK++ LHL D+SK++HV V+++ M +KKN Sbjct: 491 FSRQISQSSVYQLKDRGKFASEIMKRYLHLK--YDVSKVSHVTNLVQFVIQESMMSGQKKN 667
BLAST of EMLSAG00000001349 vs. C. finmarchicus
Match: gi|592949468|gb|GAXK01009085.1| (TSA: Calanus finmarchicus comp1413110_c0_seq1 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 7.621e+0 Identity = 20/61 (32.79%), Postives = 32/61 (52.46%), Query Frame = 0 Query: 11 FHRILSIKIV-EARKRGKYS-------LHLNECTDISKLAHVLVFVKYIDDNGAMLSRKKN 63 F R +S V + + RGK++ LHL D+SK++HV V+++ M +KKN Sbjct: 491 FSRQISQSSVYQLKDRGKFASEIMKRYLHLK--YDVSKVSHVTNLVQFVIQESMMSGQKKN 667
BLAST of EMLSAG00000001349 vs. L. salmonis peptides
Match: EMLSAP00000001349 (pep:novel supercontig:LSalAtl2s:LSalAtl2s122:1136417:1136778:1 gene:EMLSAG00000001349 transcript:EMLSAT00000001349 description:"maker-LSalAtl2s122-snap-gene-11.10") HSP 1 Score: 164.851 bits (416), Expect = 3.713e-54 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 1 MEQGLCTSVTFHRILSIKIVEARKRGKYSLHLNECTDISKLAHVLVFVKYIDDNGAMLSRKKNLKPEYYKLRLTSILHTV 80 MEQGLCTSVTFHRILSIKIVEARKRGKYSLHLNECTDISKLAHVLVFVKYIDDNGAMLSRKKNLKPEYYKLRLTSILHTV Sbjct: 1 MEQGLCTSVTFHRILSIKIVEARKRGKYSLHLNECTDISKLAHVLVFVKYIDDNGAMLSRKKNLKPEYYKLRLTSILHTV 80 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001349 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001349 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000001349 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001349 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001349 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001349 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001349 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s122:1136417..1136778+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001349-684115 ID=EMLSAG00000001349-684115|Name=EMLSAG00000001349|organism=Lepeophtheirus salmonis|type=gene|length=362bp|location=Sequence derived from alignment at LSalAtl2s122:1136417..1136778+ (Lepeophtheirus salmonis)back to top Add to Basket
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