EMLSAG00000001553, EMLSAG00000001553-684319 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Match: EMLSAP00000001553 (pep:novel supercontig:LSalAtl2s:LSalAtl2s126:27763:28306:1 gene:EMLSAG00000001553 transcript:EMLSAT00000001553 description:"maker-LSalAtl2s126-snap-gene-0.4") HSP 1 Score: 254.603 bits (649), Expect = 5.517e-88 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MIEFKIFKKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQLTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFNDVCLMYEMANDK 127 MIEFKIFKKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQLTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFNDVCLMYEMANDK Sbjct: 1 MIEFKIFKKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQLTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFNDVCLMYEMANDK 127
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Match: EMLSAP00000012244 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8920:373:1847:1 gene:EMLSAG00000012244 transcript:EMLSAT00000012244 description:"maker-LSalAtl2s8920-snap-gene-0.2") HSP 1 Score: 169.088 bits (427), Expect = 1.606e-51 Identity = 87/124 (70.16%), Postives = 103/124 (83.06%), Query Frame = 0 Query: 8 KKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQ----LTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFNDVCLMYEMANDK 127 ++VN K CLLFKEV +YFHPF YV F YCH++++ LT ++QILHE+I+LA +KYVYA DILMP+YLINLM VLIS NELKSLPSLLLETKT MDVI+PKSHSMF+ N V LM+EMANDK Sbjct: 258 EEVNVKTCLLFKEVFQYFHPFDYVAFNYCHELVRYDYLLTQNELQILHERIILAMRKYVYAYDILMPKYLINLMDVLISMNELKSLPSLLLETKTIMDVIYPKSHSMFEELNVVRLMFEMANDK 381
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Match: EMLSAP00000003016 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1710:69764:70769:1 gene:EMLSAG00000003016 transcript:EMLSAT00000003016 description:"maker-LSalAtl2s1710-snap-gene-0.6") HSP 1 Score: 161.384 bits (407), Expect = 6.489e-50 Identity = 83/124 (66.94%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 8 KKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQ----LTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFNDVCLMYEMANDK 127 ++VN K CLLFKEV +YFHPF YV F YCH++++ LT ++QILHE+I+LA +KYVYA DILMP+ LINLM VLIS NELKSLPSLLLETKT MDVI+PKSHSMF+ N V LM++MA +K Sbjct: 125 EEVNVKTCLLFKEVFQYFHPFDYVAFNYCHELVRYDYLLTQNELQILHERIILALRKYVYAYDILMPKXLINLMDVLISXNELKSLPSLLLETKTIMDVIYPKSHSMFEELNVVRLMFQMAKNK 248
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Match: EMLSAP00000002794 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1613:87683:89928:-1 gene:EMLSAG00000002794 transcript:EMLSAT00000002794 description:"snap_masked-LSalAtl2s1613-processed-gene-0.6") HSP 1 Score: 130.183 bits (326), Expect = 3.502e-37 Identity = 68/112 (60.71%), Postives = 87/112 (77.68%), Query Frame = 0 Query: 8 KKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQ----LTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFN 115 K+V+AK+ L KEV KYFHPF YV F YC+ +L LT+ ++QIL+E+ILLA +KYVY DILM +L+ LM +L+ KNELKSLPSLLLETKT MDVI+PK+HS++D N Sbjct: 201 KEVDAKSRSLLKEVFKYFHPFDYVAFYYCNALLSYKDLLTLNELQILNERILLALRKYVYDYDILMLPFLMYLMNILMKKNELKSLPSLLLETKTIMDVIYPKNHSLYDELN 312
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Match: EMLSAP00000003104 (pep:novel supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 92.4337 bits (228), Expect = 2.316e-22 Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 0 Query: 8 KKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQLTII----QIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVI 103 K++NAK CL F EVLKYFHPF YV + +C ++ + ++QIL+E+ +L +KY DI M +YL+NL+ +L+SK ELKS+P+LL E K M+ I Sbjct: 788 KEMNAKTCLYFVEVLKYFHPFDYVSYKFCDDLIARNDLIDNNKLQILYERNILTMRKYGCIYDIQMSEYLMNLIGILLSKQELKSVPNLLFEAKAIMEGI 887
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Match: EMLSAP00000007972 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4712:5322:5679:1 gene:EMLSAG00000007972 transcript:EMLSAT00000007972 description:"maker-LSalAtl2s4712-snap-gene-0.3") HSP 1 Score: 71.2478 bits (173), Expect = 7.401e-17 Identity = 38/79 (48.10%), Postives = 56/79 (70.89%), Query Frame = 0 Query: 8 KKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQ----LTIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLIS 82 K+V+AK+ L +E+ ++ HPF YV F YC+ +L LT+ ++QIL+E ILLA +KYVY DILM +LI+LM +L+ Sbjct: 23 KEVDAKSRWLLEEMFQFLHPFDYVAFSYCNALLNCKGLLTLNELQILNEMILLALRKYVYDFDILMLPFLIHLMGILME 101
BLAST of EMLSAG00000001553 vs. nr
Match: gi|225711848|gb|ACO11770.1| (SET and MYND domain-containing protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 108.997 bits (271), Expect = 1.277e-25 Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = 0 Query: 8 KKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQL-----TIIQIQILHEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAMDVIFPKSHSMFDTFNDVCLMYEMANDK 127 KKVNAK L FKEV KYFH F YV YC++++ + ++QI+ E+ILLA +KY DI + L+ LM++L++K ELKSLP+LLLETKT +D+I+P+SHS+F FNDV LM++M +K Sbjct: 302 KKVNAKTSLYFKEVCKYFHSFDYVSLKYCNELIAIHRSNYNENELQIIFERILLAKRKYGCFYDIFTAECLMLLMMILLNKEELKSLPNLLLETKTVIDLIYPRSHSIFHEFNDVNLMFQMIKNK 426 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001553 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001553 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000001553 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 6
BLAST of EMLSAG00000001553 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001553 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001553 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000001553 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s126:27763..28306+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001553-684319 ID=EMLSAG00000001553-684319|Name=EMLSAG00000001553|organism=Lepeophtheirus salmonis|type=gene|length=544bp|location=Sequence derived from alignment at LSalAtl2s126:27763..28306+ (Lepeophtheirus salmonis)back to top Add to Basket
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