EMLSAG00000002557, EMLSAG00000002557-685323 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000002557
Unique Name	EMLSAG00000002557-685323
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:RBM3 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0006412 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0043023 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 GO:GO:0035196 OMA:SDAMRAM EMBL:DAAA02073061 Ensembl:ENSBTAT00000024034 Uniprot:F6RBQ9)

HSP 1 Score: 62.003 bits (149), Expect = 2.706e-11
Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGY 89
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG +
Sbjct:    1 MSSEEG-KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGAF 94

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:Rbm3 "Putative RNA-binding protein 3" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0006412 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0043023 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 GO:GO:0035196 CTD:5935 KO:K13186 OMA:SDAMRAM RefSeq:NP_446148.1 UniGene:Rn.18057 GeneID:114488 KEGG:rno:114488 NextBio:618509 EMBL:CH474078 EMBL:AABR06102822 RefSeq:XP_006256756.1 Ensembl:ENSRNOT00000007367 PRO:PR:G3V6P6 Uniprot:G3V6P6)

HSP 1 Score: 61.6178 bits (148), Expect = 2.723e-11
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RG+RGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGTRGGA----FGAHGRGR 101

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:RBM3 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0006412 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0043023 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 GO:GO:0035196 CTD:5935 KO:K13186 OMA:SDAMRAM EMBL:AAEX03026334 RefSeq:XP_005641378.1 RefSeq:XP_863171.1 ProteinModelPortal:E2R771 Ensembl:ENSCAFT00000024556 GeneID:609457 KEGG:cfa:609457 Uniprot:E2R771)

HSP 1 Score: 60.4622 bits (145), Expect = 8.942e-11
Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T    E A  AMR +NG ++ G++++V+ A +   RG+RGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGTRGGA----FGAHGRGR 101

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:Rbm3 "Putative RNA-binding protein 3" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006417 "regulation of translation" evidence=ISS] [GO:0006950 "response to stress" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0045727 "positive regulation of translation" evidence=IDA] [GO:0015934 "large ribosomal subunit" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0000166 GO:GO:0030425 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724 HOVERGEN:HBG107480 HOGENOM:HOG000276232 CTD:5935 KO:K13186 EMBL:FM093406 EMBL:AF355190 RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0 IntAct:Q925G0 MINT:MINT-4611770 STRING:10116.ENSRNOP00000007367 PaxDb:Q925G0 PRIDE:Q925G0 GeneID:114488 KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509 Genevestigator:Q925G0 Uniprot:Q925G0)

HSP 1 Score: 60.077 bits (144), Expect = 1.007e-10
Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A   MR +NG ++ G++++V+ A +   RG+RGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHAGKSA-RGTRGGA----FGAHGRGR 101

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein 3" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation" evidence=IEA;ISO] [GO:0006417 "regulation of translation" evidence=ISO;ISS] [GO:0006950 "response to stress" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA;ISO] [GO:0015934 "large ribosomal subunit" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=IEA;ISO] [GO:0043023 "ribosomal large subunit binding" evidence=IEA;ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0045727 "positive regulation of translation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0000166 GO:GO:0030425 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724 HOVERGEN:HBG107480 HOGENOM:HOG000276232 CTD:5935 KO:K13186 EMBL:FM093406 EMBL:AF355190 RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0 IntAct:Q925G0 MINT:MINT-4611770 STRING:10116.ENSRNOP00000007367 PaxDb:Q925G0 PRIDE:Q925G0 GeneID:114488 KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509 Genevestigator:Q925G0 Uniprot:Q925G0)

HSP 1 Score: 60.077 bits (144), Expect = 1.007e-10
Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A   MR +NG ++ G++++V+ A +   RG+RGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHAGKSA-RGTRGGA----FGAHGRGR 101

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:I3LQ36 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 EMBL:CU210877 Ensembl:ENSSSCT00000005974 OMA:DWETRRS Uniprot:I3LQ36)

HSP 1 Score: 59.6918 bits (143), Expect = 1.483e-10
Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+ +V + +       +G  F+T  + E A  AMR  NG ++ G+++ V+ A +   RG+RGG +     G  RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTYEQALEDHFSSFGPIFEVVVVKDWETRRSQGFGFITFTNPEHASNAMRATNGESLDGRQIHVDHAGKSA-RGTRGGAFEAHGHGYSRGR 105

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:RBM3 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 CTD:5935 KO:K13186 OMA:SDAMRAM EMBL:FP325173 RefSeq:NP_001230348.1 RefSeq:XP_005657852.1 UniGene:Ssc.3311 Ensembl:ENSSSCT00000030983 GeneID:100627807 KEGG:ssc:100627807 Uniprot:I3L5X7)

HSP 1 Score: 56.6102 bits (135), Expect = 1.722e-9
Identity = 30/88 (34.09%), Postives = 49/88 (55.68%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGR 81
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +  R
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHAGKSAR 87

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:E2R228 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 OMA:IFRQPRA EMBL:AAEX03026350 Ensembl:ENSCAFT00000025375 Uniprot:E2R228)

HSP 1 Score: 56.225 bits (134), Expect = 1.880e-9
Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRG 91
            M S+EG  LF+ G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RG+RG  +R 
Sbjct:    1 MSSEEGM-LFLGGLNFNTNEQALEDHFSSFGPISEVVVVKDRETQRSRGFCFITFTNPEHASDAMRPMNGKSLDGRQIRVDHAGKLA-RGTRGCAFRA 96

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:RBM3 "Putative RNA-binding protein 3" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006396 "RNA processing" evidence=TAS] [GO:0006412 "translation" evidence=IEA] [GO:0006417 "regulation of translation" evidence=ISS] [GO:0009409 "response to cold" evidence=IEA] [GO:0030425 "dendrite" evidence=ISS] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0045727 "positive regulation of translation" evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006412 GO:GO:0000166 GO:GO:0030425 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396 GO:GO:0045727 GO:GO:0043023 eggNOG:COG0724 HOVERGEN:HBG107480 HOGENOM:HOG000276232 TreeFam:TF354331 GO:GO:0035196 EMBL:AF196969 EMBL:U28686 EMBL:BC006825 PIR:G01859 RefSeq:NP_006734.1 UniGene:Hs.301404 ProteinModelPortal:P98179 SMR:P98179 BioGrid:111870 IntAct:P98179 MINT:MINT-5002714 STRING:9606.ENSP00000365946 PhosphoSite:P98179 DMDM:1710620 PaxDb:P98179 PeptideAtlas:P98179 PRIDE:P98179 DNASU:5935 Ensembl:ENST00000376755 Ensembl:ENST00000376759 Ensembl:ENST00000598825 Ensembl:ENST00000600134 GeneID:5935 KEGG:hsa:5935 UCSC:uc004dkf.2 CTD:5935 GeneCards:GC0XP048432 HGNC:HGNC:9900 HPA:HPA003624 MIM:300027 neXtProt:NX_P98179 PharmGKB:PA34265 InParanoid:P98179 KO:K13186 OMA:SDAMRAM PhylomeDB:P98179 ChiTaRS:RBM3 GeneWiki:RBM3 GenomeRNAi:5935 NextBio:23136 PRO:PR:P98179 ArrayExpress:P98179 Bgee:P98179 CleanEx:HS_RBM3 Genevestigator:P98179 Uniprot:P98179)

HSP 1 Score: 55.8398 bits (133), Expect = 2.639e-9
Identity = 30/88 (34.09%), Postives = 49/88 (55.68%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGR 81
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +  R
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGKSAR 87

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BLAST of EMLSAG00000002557 vs. GO
Match: - (symbol:Rbm3 "RNA binding motif protein 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412 "translation" evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA] [GO:0006950 "response to stress" evidence=IEA] [GO:0009409 "response to cold" evidence=IDA] [GO:0015934 "large ribosomal subunit" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA] [GO:0043023 "ribosomal large subunit binding" evidence=IPI] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0045727 "positive regulation of translation" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1099460 GO:GO:0005634 GO:GO:0005737 GO:GO:0006412 GO:GO:0000166 GO:GO:0030425 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 GO:GO:0043023 eggNOG:COG0724 HOVERGEN:HBG107480 HOGENOM:HOG000276232 OrthoDB:EOG780RPD GO:GO:0035196 CTD:5935 KO:K13186 EMBL:AB016424 EMBL:AY052560 EMBL:BC006580 RefSeq:NP_001159882.1 RefSeq:NP_001159883.1 UniGene:Mm.128512 UniGene:Mm.360569 ProteinModelPortal:O89086 SMR:O89086 BioGrid:202821 IntAct:O89086 MINT:MINT-1649273 PhosphoSite:O89086 REPRODUCTION-2DPAGE:IPI00130883 PaxDb:O89086 PRIDE:O89086 Ensembl:ENSMUST00000115615 Ensembl:ENSMUST00000115619 Ensembl:ENSMUST00000115621 GeneID:19652 KEGG:mmu:19652 UCSC:uc009sob.2 NextBio:296916 PRO:PR:O89086 ArrayExpress:O89086 Bgee:O89086 CleanEx:MM_RBM3 Genevestigator:O89086 Uniprot:O89086)

HSP 1 Score: 55.4546 bits (132), Expect = 3.570e-9
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592779045|gb|GAXK01175523.1| (TSA: Calanus finmarchicus comp2654_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 74.7146 bits (182), Expect = 4.421e-16
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            S+EG KLFV+GV    P+  L+ EF + G V D + + KG AF+T  + E+A+ A   LNGTTV GQE+KV+IA
Sbjct:  286 SEEGCKLFVYGVATQTPKEDLQTEFERFGSVTDAYNSGKGYAFITYETKEEADQAKEMLNGTTVCGQEIKVDIA 507

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592779046|gb|GAXK01175522.1| (TSA: Calanus finmarchicus comp2654_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 74.7146 bits (182), Expect = 4.659e-16
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            S+EG KLFV+GV    P+  L+ EF + G V D + + KG AF+T  + E+A+ A   LNGTTV GQE+KV+IA
Sbjct:  148 SEEGCKLFVYGVATQTPKEDLQTEFERFGSVTDAYNSGKGYAFITYETKEEADQAKEMLNGTTVCGQEIKVDIA 369

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592766328|gb|GAXK01188240.1| (TSA: Calanus finmarchicus comp10430_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 72.4034 bits (176), Expect = 2.506e-15
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            ++EG KLFV+GV +    S L+ EF K G V D + T KG AFVT  + +DA  A  +LNG T+ GQ+VKV +A 
Sbjct:  166 AEEGCKLFVYGVNEGTSNSELQTEFEKFGTVTDTYNTGKGYAFVTFDNKDDASEATEQLNGATILGQQVKVNVAR 390

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592821267|gb|GAXK01133301.1| (TSA: Calanus finmarchicus comp27914_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 5.072e-13
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEK--GXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            K+++ G+RD   R  LED F K GPV DV +  +  G AFV M  A DAE A R L+GT V G  VKVE+++
Sbjct:  442 KIYIGGLRDDANRYDLEDAFAKYGPVRDVWVARRPPGFAFVEMEDARDAEDAARGLDGTRVCGSRVKVEMSN 657

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592788500|gb|GAXK01166068.1| (TSA: Calanus finmarchicus comp99_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 5.833e-13
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            +++G KLF++GV        L+ EF K G V DV+ T KG AFVT    EDAE A ++++G TV+GQ++KV  A 
Sbjct:   97 AEQGCKLFIYGVDQNMANGDLQAEFEKFGMVTDVYNTGKGFAFVTFDRKEDAETATQQMDGQTVNGQQLKVNEAR 321

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592788498|gb|GAXK01166070.1| (TSA: Calanus finmarchicus comp99_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 5.920e-13
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            +++G KLF++GV        L+ EF K G V DV+ T KG AFVT    EDAE A ++++G TV+GQ++KV  A 
Sbjct:  631 AEQGCKLFIYGVDQNMANGDLQAEFEKFGMVTDVYNTGKGFAFVTFDRKEDAETATQEMDGQTVNGQQIKVNEAR 855

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592785473|gb|GAXK01169095.1| (TSA: Calanus finmarchicus comp1623_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 65.4698 bits (158), Expect = 8.084e-13
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            ++EG KLFV+GV +    S L+ EF K G V D + T KG AFVT    + A  A  KLNG  V GQ++KV +A 
Sbjct:  405 AEEGCKLFVYGVNEGTSNSELQAEFEKFGTVTDTYNTGKGYAFVTFEDKDAAAEASDKLNGQEVLGQQLKVNVAR 629

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BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592786330|gb|GAXK01168238.1| (TSA: Calanus finmarchicus comp862_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 65.0846 bits (157), Expect = 8.217e-13
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            ++EG KLFV+GV +    S L+++F K G V D + T KG AFVT  + E A  A  +LNG  V GQ +KV +A
Sbjct:  390 AEEGCKLFVYGVNEGTSNSELQEQFEKFGTVTDTYNTGKGYAFVTYDNKESAAEASERLNGQEVLGQVLKVNVA 611

[Close]

BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592785476|gb|GAXK01169092.1| (TSA: Calanus finmarchicus comp1501_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 65.0846 bits (157), Expect = 6.005e-12
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            +++G KLF++G+        L+ EF K G V DV+ T KG AFVT    EDAE A ++++G  ++GQ++KV  A 
Sbjct: 1121 AEQGCKLFIYGIDQNMANGDLQAEFEKFGMVTDVYNTGKGFAFVTFDRKEDAESATQEMDGANLNGQQIKVNEAR 1345

[Close]

BLAST of EMLSAG00000002557 vs. C. finmarchicus
Match: gi|592785791|gb|GAXK01168777.1| (TSA: Calanus finmarchicus comp522_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 1.988e-11
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0

Query:    3 SQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            ++EG KLFV+GV +      L++EF K G V D + T KG AFVT  + E A  A  +LNG  V GQ +KV +A
Sbjct: 1649 AEEGCKLFVYGVNEGTSNHELQEEFEKFGTVTDTYNTGKGYAFVTFDNKESASEATERLNGQEVLGQVLKVNVA 1870

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BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Match: EMLSAP00000002557 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1510:50770:51213:1 gene:EMLSAG00000002557 transcript:EMLSAT00000002557 description:"augustus_masked-LSalAtl2s1510-processed-gene-0.5")

HSP 1 Score: 281.182 bits (718), Expect = 7.308e-98
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGRFGGGGGNRYNDNNDRRSYGSGGGGGGYSRXGGDRGDRGDRGGDWGGY 147
            MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGRFGGGGGNRYNDNNDRRSYGSGGGGGGYSRXGGDRGDRGDRGGDWGGY
Sbjct:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGRFGGGGGNRYNDNNDRRSYGSGGGGGGYSRXGGDRGDRGDRGGDWGGY 147

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BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Match: EMLSAP00000007347 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4162:3600:4079:1 gene:EMLSAG00000007347 transcript:EMLSAT00000007347 description:"augustus_masked-LSalAtl2s4162-processed-gene-0.0")

HSP 1 Score: 150.599 bits (379), Expect = 1.835e-46
Identity = 95/121 (78.51%), Postives = 103/121 (85.12%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGRFGGGGGNRYNDNN---DRRSY 118
            MPS+  TKLFVHGVRDTCPRSVLEDEF KIGPV DV+ITEKG AFVTM ++EDA+ A RKLNGTTV GQE+KVEIAH   RRGSRGGGYRGRFGGNDRGRF GGG  RY+DNN   +RRSY
Sbjct:    1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGRFEGGG--RYHDNNERSERRSY 119

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BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Match: EMLSAP00000002556 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1510:24535:24822:1 gene:EMLSAG00000002556 transcript:EMLSAT00000002556 description:"augustus_masked-LSalAtl2s1510-processed-gene-0.4")

HSP 1 Score: 129.798 bits (325), Expect = 4.278e-39
Identity = 72/94 (76.60%), Postives = 79/94 (84.04%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFG 94
            MPS+  TKLFVHGVRDTCPRSVLEDEF KIGPV DV+ITEKG AFVTM ++EDA+ A RKLNGTTV GQE+KVEIA   GRRGS GGG  GR+G
Sbjct:    1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAXGRGRRGSXGGGXXGRYG 94

[Close]

BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Match: EMLSAP00000000098 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1017:34509:34836:-1 gene:EMLSAG00000000098 transcript:EMLSAT00000000098 description:"snap_masked-LSalAtl2s1017-processed-gene-0.1")

HSP 1 Score: 82.0333 bits (201), Expect = 6.574e-21
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0

Query:   13 GVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGR 92
             VRDT P SVLED+     PVA++HI EK   FVT+M++EDAE AM KL  T V GQEV+++I      R  R G Y+ R
Sbjct:    2 SVRDTWPLSVLEDDLSN-NPVANIHIIEKDNVFVTLMNSEDAESAMYKLKSTPVLGQEVEMDI----FLRARRRGKYKSR 76

[Close]

BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Match: EMLSAP00000005955 (pep:novel supercontig:LSalAtl2s:LSalAtl2s321:630816:639965:-1 gene:EMLSAG00000005955 transcript:EMLSAT00000005955 description:"snap_masked-LSalAtl2s321-processed-gene-6.7")

HSP 1 Score: 71.633 bits (174), Expect = 3.585e-17
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0

Query:   29 KIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            KIGPV DVHI EK   F TM +AED EG MR+LNGTT+ GQ+VK+EIAH
Sbjct:   13 KIGPVEDVHIKEKDQVFETMRNAEDTEGFMRRLNGTTIPGQDVKMEIAH 61

[Close]

BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Match: EMLSAP00000007190 (pep:novel supercontig:LSalAtl2s:LSalAtl2s404:347783:355385:1 gene:EMLSAG00000007190 transcript:EMLSAT00000007190 description:"maker-LSalAtl2s404-augustus-gene-3.38")

HSP 1 Score: 47.7506 bits (112), Expect = 2.729e-7
Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEK--GXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGR 81
            K+++  + ++  +  LED F K GP+ +V +     G AFV      DAE ++R L+G  V GQ V+VE++    R
Sbjct:   12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGXRVCGQRVRVEMSSGQSR 87

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|952543496|sp|W8E7I1.2|RBM3_CAPHI (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3)

HSP 1 Score: 62.003 bits (149), Expect = 1.211e-11
Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGY 89
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG +
Sbjct:    1 MSSEEG-KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGAF 94

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|284022113|sp|Q925G0.2|RBM3_RAT (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3)

HSP 1 Score: 60.077 bits (144), Expect = 5.012e-11
Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A   MR +NG ++ G++++V+ A +   RG+RGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHAGKSA-RGTRGGA----FGAHGRGR 101

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|1710620|sp|P98179.1|RBM3_HUMAN (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3; AltName: Full=RNPL)

HSP 1 Score: 55.8398 bits (133), Expect = 1.863e-9
Identity = 30/88 (34.09%), Postives = 49/88 (55.68%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGR 81
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +  R
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGKSAR 87

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|166199747|sp|Q15415.2|RBY1F_HUMAN (RecName: Full=RNA-binding motif protein, Y chromosome, family 1 member F/J; AltName: Full=Y chromosome RNA recognition motif 2)

HSP 1 Score: 57.7658 bits (138), Expect = 1.881e-9
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA-----HEGGRRGSRGGGYRGRFGGNDRGRFGGGGGNR 108
            KLF+ G+       +L+  FGK GP+++V + +      +G AF+T  +  DA+ A + +NGT++HG+ +KVE A       GGRR            G+ R   G  GG R
Sbjct:    9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLRSARGSSGGTR 120

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|6093936|sp|O89086.1|RBM3_MOUSE (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3)

HSP 1 Score: 55.4546 bits (132), Expect = 2.507e-9
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|378522970|sp|P0DJD4.1|RBY1C_HUMAN (RecName: Full=RNA-binding motif protein, Y chromosome, family 1 member C)

HSP 1 Score: 55.4546 bits (132), Expect = 1.503e-8
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHE-----GGRR 82
            KLF+ G+       +L+  FGK GP+++V + +      +G AF+T  +  DA+ A + +NG ++HG+ +KVE A +     GGRR
Sbjct:    9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAQKPSFQSGGRR 94

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|190360159|sp|A6NDE4.2|RBY1B_HUMAN (RecName: Full=RNA-binding motif protein, Y chromosome, family 1 member B)

HSP 1 Score: 55.0694 bits (131), Expect = 1.805e-8
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA-----HEGGRR 82
            KLF+ G+       +L+  FGK GP+++V + +      +G AF+T  +  DA+ A + +NG ++HG+ +KVE A       GGRR
Sbjct:    9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRR 94

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|190360154|sp|A6NEQ0.1|RBY1E_HUMAN (RecName: Full=RNA-binding motif protein, Y chromosome, family 1 member E)

HSP 1 Score: 55.0694 bits (131), Expect = 2.006e-8
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA-----HEGGRR 82
            KLF+ G+       +L+  FGK GP+++V + +      +G AF+T  +  DA+ A + +NG ++HG+ +KVE A       GGRR
Sbjct:    9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRR 94

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|190360153|sp|P0C7P1.1|RBY1D_HUMAN (RecName: Full=RNA-binding motif protein, Y chromosome, family 1 member D)

HSP 1 Score: 55.0694 bits (131), Expect = 2.025e-8
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0

Query:    8 KLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA-----HEGGRR 82
            KLF+ G+       +L+  FGK GP+++V + +      +G AF+T  +  DA+ A + +NG ++HG+ +KVE A       GGRR
Sbjct:    9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRR 94

[Close]

BLAST of EMLSAG00000002557 vs. SwissProt
Match: gi|46395643|sp|P60826.1|CIRBP_CRIGR (RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP)

HSP 1 Score: 53.5286 bits (127), Expect = 2.030e-8
Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRG 91
            M S EG KLFV G+        LE  F K G +++V + +       +G  FVT  + +DA+ AM  +NG +V G++++V+ A  G    +R  GYRG
Sbjct:    1 MASDEG-KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA--GKSSDNRSRGYRG 95

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: gb|KPM03387.1| (RNA-binding protein-like protein 3 [Sarcoptes scabiei])

HSP 1 Score: 53.1434 bits (126), Expect = 4.554e-9
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0

Query:    7 TKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT--EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRG 86
             K++V  ++D C +S +E+ F K GP+ +V +     G AFV    + DAE ++R L+GT + G  V+VE++H   RRG R 
Sbjct:   12 CKVYVGNLQDNCLKSDVENAFSKFGPLKNVWVARNPPGFAFVEFEDSRDAEDSVRALDGTRIGGNRVRVEMSHGRSRRGGRR 93

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: gb|KFM68213.1| (Serine/arginine-rich splicing factor 12, partial [Stegodyphus mimosarum])

HSP 1 Score: 50.0618 bits (118), Expect = 1.994e-7
Identity = 26/79 (32.91%), Postives = 39/79 (49.37%), Query Frame = 0

Query:    6 GTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT-------EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
             + LFV  V D+     L   FGK GP+ DV+I         +G A+V      DAE A+ +L+     G+E+++E A 
Sbjct:    9 NSSLFVRNVPDSARPEELRRLFGKYGPITDVYIPLDYYSRRPRGFAYVQFEDIRDAEEALNELDRIRFFGRELEIEFAQ 87

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: EAA43387.4 (AGAP009142-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 50.0618 bits (118), Expect = 2.152e-7
Identity = 31/89 (34.83%), Postives = 47/89 (52.81%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT--EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGG 87
            M   +GT+++V  + D   +  LE EF K G +  V +     G AF+   + E+AE A   LNG  + G +++VEI+   GRR  RG 
Sbjct:    4 MGDSKGTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAETACDNLNGQDILGSKLRVEISK--GRRNPRGA 90

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: AGB92853.1 (repressor splicing factor 1, isoform B [Drosophila melanogaster])

HSP 1 Score: 49.2914 bits (116), Expect = 4.226e-7
Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT--EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            M  Q GT+++V  + D   +  LE EF K G +  V I     G AFV     +DAE A   LNG+ + G +++VEI+
Sbjct:    4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 81

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: AAF52890.1 (repressor splicing factor 1, isoform A [Drosophila melanogaster])

HSP 1 Score: 49.2914 bits (116), Expect = 4.226e-7
Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT--EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            M  Q GT+++V  + D   +  LE EF K G +  V I     G AFV     +DAE A   LNG+ + G +++VEI+
Sbjct:    4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 81

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: gb|EFA02018.1| (RNA-binding protein Rsf1-like Protein [Tribolium castaneum])

HSP 1 Score: 48.9062 bits (115), Expect = 6.044e-7
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 0

Query:    4 QEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT--EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
            +   +++V G+ D+  +  LE EF K G +  V +     G AF+  ++  DAE A   LNGT   G +++VEIA
Sbjct:    6 ERSARVYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPPGFAFIEFINHSDAESACDSLNGTDFLGSKLRVEIA 80

[Close]

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Match: gb|KFM68489.1| (RNA-binding protein Rsf1, partial [Stegodyphus mimosarum])

HSP 1 Score: 48.1358 bits (113), Expect = 9.693e-7
Identity = 22/73 (30.14%), Postives = 41/73 (56.16%), Query Frame = 0

Query:    6 GTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHIT--EKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIA 76
               ++V G+ +   +  LE EF K G +  V +     G AF+     +DA  A++++NG T++G E++V+I+
Sbjct:    3 SASVYVGGLSEDIQKEDLEREFSKFGNLTKVWVARNPPGFAFIEFEDDQDANEAIKEMNGATINGSEIRVDIS 75

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|225711820|gb|ACO11756.1| (RNA-binding protein 3 [Lepeophtheirus salmonis] >gi|225712198|gb|ACO11945.1| RNA-binding protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 131.724 bits (330), Expect = 1.495e-36
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
            MPS+  TKLFVHGVRDTCPRSVLEDEF KIGPV DV+ITEKG AFVTM ++EDA+ A RKLNGTTV GQE+KVEIAH
Sbjct:    1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|594042407|ref|XP_006045739.1| (PREDICTED: putative RNA-binding protein 3 isoform X1 [Bubalus bubalis] >gi|594042409|ref|XP_006045740.1| PREDICTED: putative RNA-binding protein 3 isoform X2 [Bubalus bubalis] >gi|594042411|ref|XP_006045741.1| PREDICTED: putative RNA-binding protein 3 isoform X3 [Bubalus bubalis])

HSP 1 Score: 65.0846 bits (157), Expect = 1.656e-10
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG     FGG +RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGA----FGGYERGR 101

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|594042413|ref|XP_006045742.1| (PREDICTED: putative RNA-binding protein 3 isoform X4 [Bubalus bubalis])

HSP 1 Score: 65.0846 bits (157), Expect = 1.923e-10
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG     FGG +RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGA----FGGYERGR 101

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|507654782|ref|XP_004633702.1| (PREDICTED: RNA-binding protein 3 [Octodon degus])

HSP 1 Score: 63.5438 bits (153), Expect = 5.762e-10
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RG+RGG   G FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGTRGG---GAFGAHGRGR 102

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|348553582|ref|XP_003462605.1| (PREDICTED: RNA-binding protein 3 isoform X1 [Cavia porcellus] >gi|514446718|ref|XP_005000307.1| PREDICTED: RNA-binding protein 3 isoform X1 [Cavia porcellus])

HSP 1 Score: 63.1586 bits (152), Expect = 8.848e-10
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+  +     LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RG+RGG   G FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGTRGG---GAFGAHGRGR 102

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|1012186537|ref|XP_016008837.1| (PREDICTED: RNA-binding protein 3 isoform X1 [Rousettus aegyptiacus] >gi|1012186541|ref|XP_016008838.1| PREDICTED: RNA-binding protein 3 isoform X1 [Rousettus aegyptiacus])

HSP 1 Score: 62.7734 bits (151), Expect = 1.053e-9
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGA----FGAHGRGR 101

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|1012186544|ref|XP_016008839.1| (PREDICTED: RNA-binding protein 3 isoform X2 [Rousettus aegyptiacus] >gi|1012186548|ref|XP_016008840.1| PREDICTED: RNA-binding protein 3 isoform X2 [Rousettus aegyptiacus])

HSP 1 Score: 62.7734 bits (151), Expect = 1.089e-9
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGA----FGAHGRGR 101

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|350538645|ref|NP_001233728.1| (RNA-binding protein 3 [Cricetulus griseus] >gi|524970642|ref|XP_005085188.1| PREDICTED: RNA-binding protein 3 isoform X1 [Mesocricetus auratus] >gi|625204784|ref|XP_007643790.1| PREDICTED: RNA-binding protein 3 isoform X1 [Cricetulus griseus] >gi|1032884664|ref|XP_016832445.1| PREDICTED: RNA-binding protein 3 isoform X1 [Cricetulus griseus] >gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus] >gi|537120012|gb|ERE63734.1| RNA-binding motif 3 [Cricetulus griseus] >gi|1040286592|gb|OBS81148.1| hypothetical protein A6R68_20670 [Neotoma lepida])

HSP 1 Score: 62.7734 bits (151), Expect = 1.122e-9
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGA----FGAHGRGR 101

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|589965191|ref|XP_006995130.1| (PREDICTED: RNA-binding protein 3 isoform X1 [Peromyscus maniculatus bairdii] >gi|1008797649|ref|XP_015844094.1| PREDICTED: RNA-binding protein 3 isoform X1 [Peromyscus maniculatus bairdii])

HSP 1 Score: 62.7734 bits (151), Expect = 1.122e-9
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RGSRGG     FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGSRGGA----FGAHGRGR 101

[Close]

BLAST of EMLSAG00000002557 vs. nr
Match: gi|731270970|ref|XP_010604679.1| (PREDICTED: RNA-binding protein 3 isoform X2 [Fukomys damarensis])

HSP 1 Score: 62.7734 bits (151), Expect = 1.146e-9
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0

Query:    1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITE-------KGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAHEGGRRGSRGGGYRGRFGGNDRGR 100
            M S+EG KLFV G+        LED F   GP+++V + +       +G  F+T  + E A  AMR +NG ++ G++++V+ A +   RG+RGG   G FG + RGR
Sbjct:    1 MSSEEG-KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA-RGTRGG---GAFGAHGRGR 102

The following BLAST results are available for this feature:

BLAST of EMLSAG00000002557 vs. GO
BLAST of EMLSAG00000002557 vs. C. finmarchicus
BLAST of EMLSAG00000002557 vs. L. salmonis peptides
BLAST of EMLSAG00000002557 vs. SwissProt
BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
BLAST of EMLSAG00000002557 vs. nr
BLAST of EMLSAG00000002557 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000002557 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	2.706e-11	36.46	symbol:RBM3 "Uncharacterized protein" species:9913...	[more]
-	2.723e-11	36.45	symbol:Rbm3 "Putative RNA-binding protein 3" speci...	[more]
-	8.942e-11	36.45	symbol:RBM3 "Uncharacterized protein" species:9615...	[more]
-	1.007e-10	35.51	symbol:Rbm3 "Putative RNA-binding protein 3" speci...	[more]
-	1.007e-10	35.51	symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein...	[more]
-	1.483e-10	35.51	symbol:I3LQ36 "Uncharacterized protein" species:98...	[more]
-	1.722e-9	34.09	symbol:RBM3 "Uncharacterized protein" species:9823...	[more]
-	1.880e-9	32.65	symbol:E2R228 "Uncharacterized protein" species:96...	[more]
-	2.639e-9	34.09	symbol:RBM3 "Putative RNA-binding protein 3" speci...	[more]
-	3.570e-9	34.94	symbol:Rbm3 "RNA binding motif protein 3" species:...	[more]

Pages

BLAST of EMLSAG00000002557 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592779045\|gb\|GAXK01175523.1\|	4.421e-16	50.00	TSA: Calanus finmarchicus comp2654_c1_seq1 transcr...	[more]
gi\|592779046\|gb\|GAXK01175522.1\|	4.659e-16	50.00	TSA: Calanus finmarchicus comp2654_c0_seq1 transcr...	[more]
gi\|592766328\|gb\|GAXK01188240.1\|	2.506e-15	48.00	TSA: Calanus finmarchicus comp10430_c0_seq1 transc...	[more]
gi\|592821267\|gb\|GAXK01133301.1\|	5.072e-13	48.61	TSA: Calanus finmarchicus comp27914_c0_seq1 transc...	[more]
gi\|592788500\|gb\|GAXK01166068.1\|	5.833e-13	45.33	TSA: Calanus finmarchicus comp99_c0_seq1 transcrib...	[more]
gi\|592788498\|gb\|GAXK01166070.1\|	5.920e-13	45.33	TSA: Calanus finmarchicus comp99_c2_seq1 transcrib...	[more]
gi\|592785473\|gb\|GAXK01169095.1\|	8.084e-13	46.67	TSA: Calanus finmarchicus comp1623_c1_seq1 transcr...	[more]
gi\|592786330\|gb\|GAXK01168238.1\|	8.217e-13	45.95	TSA: Calanus finmarchicus comp862_c1_seq1 transcri...	[more]
gi\|592785476\|gb\|GAXK01169092.1\|	6.005e-12	41.33	TSA: Calanus finmarchicus comp1501_c0_seq1 transcr...	[more]
gi\|592785791\|gb\|GAXK01168777.1\|	1.988e-11	45.95	TSA: Calanus finmarchicus comp522_c1_seq1 transcri...	[more]

Pages

BLAST of EMLSAG00000002557 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 6


Match Name	E-value	Identity	Description
EMLSAP00000002557	7.308e-98	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1510:5077...	[more]
EMLSAP00000007347	1.835e-46	78.51	pep:novel supercontig:LSalAtl2s:LSalAtl2s4162:3600...	[more]
EMLSAP00000002556	4.278e-39	76.60	pep:novel supercontig:LSalAtl2s:LSalAtl2s1510:2453...	[more]
EMLSAP00000000098	6.574e-21	51.25	pep:novel supercontig:LSalAtl2s:LSalAtl2s1017:3450...	[more]
EMLSAP00000005955	3.585e-17	69.39	pep:novel supercontig:LSalAtl2s:LSalAtl2s321:63081...	[more]
EMLSAP00000007190	2.729e-7	34.21	pep:novel supercontig:LSalAtl2s:LSalAtl2s404:34778...	[more]

BLAST of EMLSAG00000002557 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|952543496\|sp\|W8E7I1.2\|RBM3_CAPHI	1.211e-11	36.46	RecName: Full=RNA-binding protein 3; AltName: Full...	[more]
gi\|284022113\|sp\|Q925G0.2\|RBM3_RAT	5.012e-11	35.51	RecName: Full=RNA-binding protein 3; AltName: Full...	[more]
gi\|1710620\|sp\|P98179.1\|RBM3_HUMAN	1.863e-9	34.09	RecName: Full=RNA-binding protein 3; AltName: Full...	[more]
gi\|166199747\|sp\|Q15415.2\|RBY1F_HUMAN	1.881e-9	33.04	RecName: Full=RNA-binding motif protein, Y chromos...	[more]
gi\|6093936\|sp\|O89086.1\|RBM3_MOUSE	2.507e-9	34.94	RecName: Full=RNA-binding protein 3; AltName: Full...	[more]
gi\|378522970\|sp\|P0DJD4.1\|RBY1C_HUMAN	1.503e-8	34.88	RecName: Full=RNA-binding motif protein, Y chromos...	[more]
gi\|190360159\|sp\|A6NDE4.2\|RBY1B_HUMAN	1.805e-8	34.88	RecName: Full=RNA-binding motif protein, Y chromos...	[more]
gi\|190360154\|sp\|A6NEQ0.1\|RBY1E_HUMAN	2.006e-8	34.88	RecName: Full=RNA-binding motif protein, Y chromos...	[more]
gi\|190360153\|sp\|P0C7P1.1\|RBY1D_HUMAN	2.025e-8	34.88	RecName: Full=RNA-binding motif protein, Y chromos...	[more]
gi\|46395643\|sp\|P60826.1\|CIRBP_CRIGR	2.030e-8	35.71	RecName: Full=Cold-inducible RNA-binding protein; ...	[more]

Pages

BLAST of EMLSAG00000002557 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7


Match Name	E-value	Identity	Description
gb\|KPM03387.1\|	4.554e-9	37.80	RNA-binding protein-like protein 3 [Sarcoptes scab...	[more]
gb\|KFM68213.1\|	1.994e-7	32.91	Serine/arginine-rich splicing factor 12, partial [...	[more]
EAA43387.4	2.152e-7	34.83	AGAP009142-PA, partial [Anopheles gambiae str. PES...	[more]
AGB92853.1	4.226e-7	37.18	repressor splicing factor 1, isoform B [Drosophila...	[more]
AAF52890.1	4.226e-7	37.18	repressor splicing factor 1, isoform A [Drosophila...	[more]
gb\|EFA02018.1\|	6.044e-7	34.67	RNA-binding protein Rsf1-like Protein [Tribolium c...	[more]
gb\|KFM68489.1\|	9.693e-7	30.14	RNA-binding protein Rsf1, partial [Stegodyphus mim...	[more]

BLAST of EMLSAG00000002557 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225711820\|gb\|ACO11756.1\|	1.495e-36	80.52	RNA-binding protein 3 [Lepeophtheirus salmonis] >g...	[more]
gi\|594042407\|ref\|XP_006045739.1\|	1.656e-10	38.32	PREDICTED: putative RNA-binding protein 3 isoform ...	[more]
gi\|594042413\|ref\|XP_006045742.1\|	1.923e-10	38.32	PREDICTED: putative RNA-binding protein 3 isoform ...	[more]
gi\|507654782\|ref\|XP_004633702.1\|	5.762e-10	37.38	PREDICTED: RNA-binding protein 3 [Octodon degus]	[more]
gi\|348553582\|ref\|XP_003462605.1\|	8.848e-10	37.38	PREDICTED: RNA-binding protein 3 isoform X1 [Cavia...	[more]
gi\|1012186537\|ref\|XP_016008837.1\|	1.053e-9	37.38	PREDICTED: RNA-binding protein 3 isoform X1 [Rouse...	[more]
gi\|1012186544\|ref\|XP_016008839.1\|	1.089e-9	37.38	PREDICTED: RNA-binding protein 3 isoform X2 [Rouse...	[more]
gi\|350538645\|ref\|NP_001233728.1\|	1.122e-9	37.38	RNA-binding protein 3 [Cricetulus griseus] >gi\|524...	[more]
gi\|589965191\|ref\|XP_006995130.1\|	1.122e-9	37.38	PREDICTED: RNA-binding protein 3 isoform X1 [Perom...	[more]
gi\|731270970\|ref\|XP_010604679.1\|	1.146e-9	37.38	PREDICTED: RNA-binding protein 3 isoform X2 [Fukom...	[more]

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BLAST of EMLSAG00000002557 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1510	supercontig	LSalAtl2s1510:50770..51213 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	augustus_masked-LSalAtl2s1510-processed-gene-0.5
Biotype	protein_coding
Evidence	IEA
Note	RNA-binding protein 3 [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000002557 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000002557	EMLSAT00000002557-698404	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1510:50770..51213+

gene from alignment at LSalAtl2s1510:50770..51213+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000002557-685323 ID=EMLSAG00000002557-685323|Name=EMLSAG00000002557|organism=Lepeophtheirus salmonis|type=gene|length=444bp|location=Sequence derived from alignment at LSalAtl2s1510:50770..51213+ (Lepeophtheirus salmonis)
ATGCCGTCTCAGGAAGGAACCAAATTATTTGTCCATGGTGTTCGAGACAC
TTGTCCCCGCAGTGTTCTAGAAGATGAATTCGGTAAAATCGGTCCCGTGG
CGGATGTACATATTACCGAGAAGGGCTYCGCCTTTGTTACGATGATGAGC
GCCGAGGACGCTGAGGGTGCCATGCGCAAGTTAAATGGTACAACGGTCCA
TGGTCAGGAAGTTAAGGTGGAGATTGCCCATGAAGGAGGTCGTCGTGGAT
CCCGGGGTGGAGGCTACAGAGGCCGATTTGGCGGCAATGATCGGGGACGA
TTCGGAGGMGGCGGTGGAAACCGGTACAATGACAATAATGATCGCCGCAG
CTATGGAAGTGGCGGMGGAGGAGGAGGATACTCCAGGMCTGGMGGAGACC
GGGGAGATCGTGGAGACCGTGGAGGTGATTGGGGAGGATATTAA

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