EMLSAG00000002958, EMLSAG00000002958-685724 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753161|gb|GAXK01201252.1| (TSA: Calanus finmarchicus comp145008_c2_seq44 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.237e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2270 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2482
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753162|gb|GAXK01201251.1| (TSA: Calanus finmarchicus comp145008_c2_seq43 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.237e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2270 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2482
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753163|gb|GAXK01201250.1| (TSA: Calanus finmarchicus comp145008_c2_seq42 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.239e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2291 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2503
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753164|gb|GAXK01201249.1| (TSA: Calanus finmarchicus comp145008_c2_seq41 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.239e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2291 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2503
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753165|gb|GAXK01201248.1| (TSA: Calanus finmarchicus comp145008_c2_seq40 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.240e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2303 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2515
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753166|gb|GAXK01201247.1| (TSA: Calanus finmarchicus comp145008_c2_seq39 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.240e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2303 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2515
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753167|gb|GAXK01201246.1| (TSA: Calanus finmarchicus comp145008_c2_seq38 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.250e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2423 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2635
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753168|gb|GAXK01201245.1| (TSA: Calanus finmarchicus comp145008_c2_seq37 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.250e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2423 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2635
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753169|gb|GAXK01201244.1| (TSA: Calanus finmarchicus comp145008_c2_seq36 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.251e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2435 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2647
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Match: gi|592753170|gb|GAXK01201243.1| (TSA: Calanus finmarchicus comp145008_c2_seq35 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.251e+0 Identity = 24/74 (32.43%), Postives = 34/74 (45.95%), Query Frame = 0 Query: 36 TENPFLDVLLSGFQRKPE-KKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIE 108 +E LDV L F + +N F DE+ RTE M K+ +N K R +N D+ + C + D L E Sbjct: 2435 SEVKILDVKLKEFVSSEKLVRNIQFDNDEMLRTELMQIKETNMNKVKDQR--ENQDTRLKEAKASCID-DNLTE 2647
BLAST of EMLSAG00000002958 vs. L. salmonis peptides
Match: EMLSAP00000002958 (pep:novel supercontig:LSalAtl2s:LSalAtl2s16:529691:537674:-1 gene:EMLSAG00000002958 transcript:EMLSAT00000002958 description:"augustus_masked-LSalAtl2s16-processed-gene-5.0") HSP 1 Score: 320.087 bits (819), Expect = 7.766e-113 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 Query: 1 MMDGGDAVTSGGGKSRGGGGGAHDSDLLDDSILRETENPFLDVLLSGFQRKPEKKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIEMSYHAAEQLLMIVSVFCFCFVLYMXLLAIEKITVHFFGTKNEGQGDY 155 MMDGGDAVTSGGGKSRGGGGGAHDSDLLDDSILRETENPFLDVLLSGFQRKPEKKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIEMSYHAAEQLLMIVSVFCFCFVLYMXLLAIEKITVHFFGTKNEGQGDY Sbjct: 1 MMDGGDAVTSGGGKSRGGGGGAHDSDLLDDSILRETENPFLDVLLSGFQRKPEKKNYHFKFDELARTECMIAKQNLINVCKSSRYCQNSDSMRLSVEEMCTEYDELIEMSYHAAEQLLMIVSVFCFCFVLYMXLLAIEKITVHFFGTKNEGQGDY 155 The following BLAST results are available for this feature:
BLAST of EMLSAG00000002958 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000002958 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000002958 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000002958 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000002958 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000002958 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000002958 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s16:529691..537674- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000002958-685724 ID=EMLSAG00000002958-685724|Name=EMLSAG00000002958|organism=Lepeophtheirus salmonis|type=gene|length=7984bp|location=Sequence derived from alignment at LSalAtl2s16:529691..537674- (Lepeophtheirus salmonis)back to top Add to Basket
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