EMLSAG00000003151, EMLSAG00000003151-685917 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003151
Unique NameEMLSAG00000003151-685917
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003151 vs. L. salmonis peptides
Match: EMLSAP00000003151 (pep:novel supercontig:LSalAtl2s:LSalAtl2s175:683798:686174:-1 gene:EMLSAG00000003151 transcript:EMLSAT00000003151 description:"maker-LSalAtl2s175-snap-gene-6.8")

HSP 1 Score: 177.178 bits (448), Expect = 1.456e-58
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MEAHEETSSFQISKIEIIIPKIEEESEKKKISKKKKKIKKKCLPPSEILTRSLATALKLIEEKRRQKDEEIRKLALKQKEKMIQSNPDRYSRVIL 95
            MEAHEETSSFQISKIEIIIPKIEEESEKKKISKKKKKIKKKCLPPSEILTRSLATALKLIEEKRRQKDEEIRKLALKQKEKMIQSNPDRYSRVIL
Sbjct:    1 MEAHEETSSFQISKIEIIIPKIEEESEKKKISKKKKKIKKKCLPPSEILTRSLATALKLIEEKRRQKDEEIRKLALKQKEKMIQSNPDRYSRVIL 95
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BLAST of EMLSAG00000003151 vs. L. salmonis peptides
Match: EMLSAP00000003166 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1768:4118:4531:-1 gene:EMLSAG00000003166 transcript:EMLSAT00000003166 description:"augustus_masked-LSalAtl2s1768-processed-gene-0.0")

HSP 1 Score: 65.0846 bits (157), Expect = 7.192e-15
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 0 
Query:   45 PSEILTRSLATALKLIE-----EKRRQKDEEIRKLALKQKEKMIQSNPDRYSRVIL 95
            PS ILTR+LATALKLI+     EK ++K++ IR++AL QKEKM++SNPD YSR+IL
Sbjct:   43 PSLILTRTLATALKLIQHEKAQEKLKEKEKMIRQMALLQKEKMMRSNPDLYSRIIL 98
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BLAST of EMLSAG00000003151 vs. L. salmonis peptides
Match: EMLSAP00000003297 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1815:17847:22122:1 gene:EMLSAG00000003297 transcript:EMLSAT00000003297 description:"maker-LSalAtl2s1815-augustus-gene-0.3")

HSP 1 Score: 62.7734 bits (151), Expect = 3.883e-14
Identity = 38/97 (39.18%), Postives = 63/97 (64.95%), Query Frame = 0 
Query:    4 HEETSSFQISKIEIIIPKIEEESEKKKISKKKKKIKKKCLPPSEILTRSLATALKLI-----EEKRRQKDEEIRKLALKQKEKMIQSNPDRYSRVIL 95
            +++TSSF +S I ++IP ++E  E +        IK+  L  S++L ++ +TA++LI     +E+R  KD+EIR++ L  KEKMI+ NPD +SR+ L
Sbjct:    5 NQKTSSFTLSPISVVIPTVKELPEDR--------IKR--LRYSQVLEKTFSTAIRLIHHQRVQERRAMKDKEIRRMGLLMKEKMIKDNPDEFSRLRL 91
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003151 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003151 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003151 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000031511.456e-58100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s175:68379... [more]
EMLSAP000000031667.192e-1562.50pep:novel supercontig:LSalAtl2s:LSalAtl2s1768:4118... [more]
EMLSAP000000032973.883e-1439.18pep:novel supercontig:LSalAtl2s:LSalAtl2s1815:1784... [more]
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BLAST of EMLSAG00000003151 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003151 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003151 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003151 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s175supercontigLSalAtl2s175:683798..686174 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s175-snap-gene-6.8
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003151 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003151EMLSAT00000003151-698998Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s175:683798..686174-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003151-685917 ID=EMLSAG00000003151-685917|Name=EMLSAG00000003151|organism=Lepeophtheirus salmonis|type=gene|length=2377bp|location=Sequence derived from alignment at LSalAtl2s175:683798..686174- (Lepeophtheirus salmonis)
ATGGGTAAGCTCTACTTTATTGCTATAAGAAACAAGTTTAGTGTACATCA
GTACAAATTTTTCTTAACAAAACATATTAAAGGTTAAATCTTTTCTTGGC
ATAATTTTTACCAGATGTATTTTTCCAAAGACGTAAATTATATGATGATC
GATGAGAAAACTTAAGGCCTTAAGCAAGAGATTCCAAACCTTATTATCAC
TAAGAGTATAATTTCATATATTGTGGCATATAAATCATGCTTAACCAAAT
GTTGTATGCATTATATATGTAATGTTTCGTCAAGCCCTTGACGATGCACC
GTAAAAACGCAAGGCTCCGAGAAGCCCCTGGTCAGGTCCTTAATTACTCA
TTAAAAGGCATATAAATTTTGTAAAATGTGAGAAGGAGAATTATGGTGCA
ATTGAAAGGCCCCGATTATCATCAGCTGTTTTTTATATGATTTTAGAGGG
AGAAAATGGATTACTGCAATAAAGAGCAGAACTTTTGGTATTTAAAATAG
CATTAGAACAAAGACAATATAATAATTAGATTGAAATATATTTGTGTATT
ATTATGTTAGTCTGCTTTTTTTTATTCATCAAAGCGTAGACGGAATTCTT
CGTTTGACTAAAGATATTATCATCACGATAATCTATCGAAGAATGGGCAT
AGTTTAAAAAAAAATATATATAAGTGTCAAACATTATTTCTTTTAATCTT
AAAACTATTTTTTTTAACGTTTCACCAATCCAATAGTCAGTTGGAATCAT
CTGTTTTTTACTTTATTTTTAAAGTGAAAATGTTTGATTATCTAATATAA
TGAAAAATAAATAAAGTAATTCATGGCTTMATAGGMACATGGAACTCTTG
GAGAAAAAWAATCATTATTATAGGGGTGGAACTGGGGGAAATAATACAAC
TATGCATTAGGGGAATGAGGCAATTTTGTATTAAATATCAAGATTCCATT
TGTTACAAACTTTTTGGCTCTCTCTAATTGTAATAAAATTACTTTTTTCC
TTTTCTTTTTTACAGCTATATAATTGATCATTTGTCAAAAAGGCAATGTT
TACTTGTTCTCCATTGAATTCAAATAATTGGAACTATCCACAAAAATAAA
ATTTATTCATTATAAATTAAAATCATTCTAAGATATATATTTATTTTTTC
TATCTATTTGGAATCATCTGTATTGACAAAGAAGCTCATGAGGAAACTTC
AAGCTTTCAAATCTCCAAAATTGAGATAATTATTCCAAAAATTGAGGAAG
AGTCTGAAAAAAAGAAAATATCCAAGAAAAAGAAGAAGATTAAGAAGAAA
TGTCTTCCTCCATCCGAAATTTTAACAAGAAGTCTTGCTACAGCCTTGAA
GCTTGTTCAACAGCAACATGTAAATTTAGTATAAAGTTTAAAATTATCTT
TTCAGTGATGAATATATATATATATATTTCGAAATGTTGGGAGACTTAGT
CCTCAAATGGACATTTTGATCAAAAATATACAAATATAAAATTGGAGCTA
AATACATCAATCTTAAAGTTTCTAAATTTTACAATTTTGTAAAAAAAGGT
CTAGTCCTACCCATTAATAGGCATTACTTTACATTAATTAACAATCTATC
AAAAGTTGTATACTGGTTTACTTTTAAAGAGAGTAATTTCATTTAAAAAA
AAAAATAAAAACAGCTTATTGTTGTGGCGCACATATTGCACATTGCTTAC
TTCAAAGTCGATGTGCAGCCCTTAAAAACGGATAAATATGACACACACTT
TATTTATTTTTTTAAATTATAATTTTATAAAATGATACTCATACAACATG
GACCCGAAGTTATAATATTTTTAATTTGTCATACTTTCCGAACTATTAAA
TCCGTTTGCACTCGTAAATATCCTCTAAAAATACTTACTTGAGATGTAAA
TATAAAATTATAAATACATCCAATAAAAGTTTATGATTAATATTTAGCTT
TATTGAAAAAATATTTTTTTAAAGTATCAATGTAAAGAATTTACCACTTA
TATAAGTCTTTATTTATTTTACATCAAAATGAGAACACGATGTGTGTTNC
TTTTTATTAAGTATCATATTTCTTGTTGTGTTTACTCAAAATATTAACTT
ACATATTTATGTAGTATTCAAGTGTGACTCGCAATATGATGGACAATCAT
ATTTGGATTAGTATTTCCATAGAAACTAAAAAAAATATAATAATTGTATT
ACAAATTGTATCCTTCAAAATATACTATATACGAGTGCATCTATTTGAAA
CCATGCATACTTTCAGATAGAAGAAAAAAGACGTCAAAAGGATGAAGAAA
TTAGAAAGCTTGCATTGAAACAAAAGGAAAAAATGATACAGTCAAATCCT
GATCGATATTCTCGAGTTATCCTATAA
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