EMLSAG00000003196, EMLSAG00000003196-685962 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000003196
Unique Name	EMLSAG00000003196-685962
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:RHO "Rhodopsin" species:9031 "Gallus gallus" [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601 GO:GO:0004930 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 KO:K04250 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:D00702 PIR:S29152 RefSeq:NP_001025777.1 UniGene:Gga.54135 ProteinModelPortal:P22328 SMR:P22328 GeneID:751791 KEGG:gga:751791 NextBio:20917913 PRO:PR:P22328 Uniprot:P22328)

HSP 1 Score: 77.7962 bits (190), Expect = 3.204e-16
Identity = 39/119 (32.77%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  +  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFMIPLAVIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:RHO "Rhodopsin" species:9031 "Gallus gallus" [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0042622 "photoreceptor outer segment membrane" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IEA] [GO:0060342 "photoreceptor inner segment membrane" evidence=IEA] [GO:0071482 "cellular response to light stimulus" evidence=IEA] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601 GO:GO:0004930 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 InterPro:IPR027430 PROSITE:PS00238 GeneTree:ENSGT00710000106574 OrthoDB:EOG72NRQJ TreeFam:TF324998 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:AADN03006509 Ensembl:ENSGALT00000033236 Uniprot:F1P3Y2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.404e-16
Identity = 39/119 (32.77%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  +  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFMIPLAVIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:RHO "Rhodopsin" species:9913 "Bos taurus" [GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS;TAS] [GO:0005887 "integral component of plasma membrane" evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0007603 "phototransduction, visible light" evidence=IDA] [GO:0008020 "G-protein coupled photoreceptor activity" evidence=IDA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0042622 "photoreceptor outer segment membrane" evidence=ISS] [GO:0043087 "regulation of GTPase activity" evidence=TAS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IEA] [GO:0060342 "photoreceptor inner segment membrane" evidence=ISS] [GO:0071482 "cellular response to light stimulus" evidence=IEA] [GO:0097381 "photoreceptor disc membrane" evidence=TAS] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0005794 GO:GO:0005887 GO:GO:0046872 GO:GO:0007601 GO:GO:0006468 GO:GO:0097381 GO:GO:0007603 GO:GO:0060041 GO:GO:0005085 GO:GO:0018298 GO:GO:0042622 GO:GO:0071482 GO:GO:0008020 PDB:2X72 PDB:3DQB PDB:3PQR PDB:4BEY PDB:4J4Q PDBsum:2X72 PDBsum:3DQB PDBsum:3PQR PDBsum:4BEY PDBsum:4J4Q PDB:4A4M PDBsum:4A4M HOGENOM:HOG000253932 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GeneTree:ENSGT00710000106574 OrthoDB:EOG72NRQJ TreeFam:TF324998 EMBL:K00506 EMBL:K00502 EMBL:K00503 EMBL:K00504 EMBL:K00505 EMBL:M21606 PIR:A90840 RefSeq:NP_001014890.1 UniGene:Bt.12753 PDB:1BOJ PDB:1BOK PDB:1EDS PDB:1EDV PDB:1EDW PDB:1EDX PDB:1F88 PDB:1FDF PDB:1GZM PDB:1HZX PDB:1JFP PDB:1L9H PDB:1LN6 PDB:1N3M PDB:1NZS PDB:1OV0 PDB:1OV1 PDB:1U19 PDB:1VQX PDB:2G87 PDB:2HPY PDB:2I35 PDB:2I36 PDB:2I37 PDB:2IQK PDB:2J4Y PDB:2PED PDB:3C9L PDB:3C9M PDB:3CAP PDB:3OAX PDB:3PXO PDB:4BEZ PDBsum:1BOJ PDBsum:1BOK PDBsum:1EDS PDBsum:1EDV PDBsum:1EDW PDBsum:1EDX PDBsum:1F88 PDBsum:1FDF PDBsum:1GZM PDBsum:1HZX PDBsum:1JFP PDBsum:1L9H PDBsum:1LN6 PDBsum:1N3M PDBsum:1NZS PDBsum:1OV0 PDBsum:1OV1 PDBsum:1U19 PDBsum:1VQX PDBsum:2G87 PDBsum:2HPY PDBsum:2I35 PDBsum:2I36 PDBsum:2I37 PDBsum:2IQK PDBsum:2J4Y PDBsum:2PED PDBsum:3C9L PDBsum:3C9M PDBsum:3CAP PDBsum:3OAX PDBsum:3PXO PDBsum:4BEZ DisProt:DP00271 ProteinModelPortal:P02699 SMR:P02699 DIP:DIP-29225N IntAct:P02699 MINT:MINT-1507462 STRING:9913.ENSBTAP00000001730 BindingDB:P02699 ChEMBL:CHEMBL5739 UniCarbKB:P02699 Ensembl:ENSBTAT00000001730 GeneID:509933 KEGG:bta:509933 CTD:6010 eggNOG:NOG311294 InParanoid:P02699 KO:K04250 OMA:LAAYMFM EvolutionaryTrace:P02699 NextBio:20869202 GO:GO:0060342 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 Uniprot:P02699)

HSP 1 Score: 74.7146 bits (182), Expect = 4.627e-15
Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ FIIP  +  +    ++  +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAK+   +NP IYI+MNK+F+  MV
Sbjct:  203 FVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY-IFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMV 318

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BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:rhol "rhodopsin, like" species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA;IDA] [GO:0009881 "photoreceptor activity" evidence=IEA;IDA] [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-070424-6 GO:GO:0016021 GO:GO:0007601 GO:GO:0004930 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 HOGENOM:HOG000253932 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GeneTree:ENSGT00710000106574 OrthoDB:EOG72NRQJ TreeFam:TF324998 eggNOG:NOG311294 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 CTD:562845 EMBL:AL935040 EMBL:BC115322 EMBL:HM367062 EMBL:HQ286326 RefSeq:NP_001103501.1 UniGene:Dr.45096 STRING:7955.ENSDARP00000094748 Ensembl:ENSDART00000103973 GeneID:562845 KEGG:dre:562845 InParanoid:A4FUN8 OMA:TENESFV NextBio:20884616 Uniprot:A4FUN8)

HSP 1 Score: 73.559 bits (179), Expect = 1.017e-14
Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD----VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVL 118
            +++Y+ ++ F IP  I  +    ++C +K    + +  + + TQ  +  + RMV+LMV+ F +CW PYA V+ Y +F        PV  TV P  FAKS   +NP IY+ MNK+F+  M++
Sbjct:  203 FVIYMFVVHFSIPLTIISFCYGRLLCTVKVAAAQQQ--ESETTQRAEREVTRMVILMVIAFLICWLPYASVAWY-IFTHQGSQFGPVFMTV-PAFFAKSSALYNPLIYVFMNKQFRHSMMM 319

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BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:exorh "extra-ocular rhodopsin" species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA] [GO:0007602 "phototransduction" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor activity" evidence=IDA] [GO:0016038 "absorption of visible light" evidence=IDA] [GO:0009584 "detection of visible light" evidence=IDA] [GO:0009416 "response to light stimulus" evidence=IDA] [GO:0007623 "circadian rhythm" evidence=IDA] [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0032922 "circadian regulation of gene expression" evidence=IMP] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-991229-12 GO:GO:0016021 GO:GO:0007601 GO:GO:0032922 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GO:GO:0016038 KO:K04250 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:BC098524 EMBL:AB025312 RefSeq:NP_571287.1 UniGene:Dr.81258 GeneID:30459 KEGG:dre:30459 CTD:30459 NextBio:20806854 Uniprot:Q9PTX9)

HSP 1 Score: 73.1738 bits (178), Expect = 1.627e-14
Identity = 42/120 (35.00%), Postives = 69/120 (57.50%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD----VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ IL F IP  I  +    ++C ++    + +  + + TQ  +  + RMV++MV+ F VCW PYA V+ Y +F        PV  TV P  FAKS   +NP IYI++N++F+  M+
Sbjct:  203 FVIYMFILHFSIPLLIIFFCYSRLLCTVRAAAAQQQ--ESETTQRAEREVTRMVVVMVIAFLVCWVPYASVAWY-IFANQGAEFGPVFMTV-PAFFAKSAALYNPVIYIMLNRQFRNCML 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:RHO "Rhodopsin" species:9301 "Sminthopsis crassicaudata" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS] [GO:0042622 "photoreceptor outer segment membrane" evidence=ISS] [GO:0060342 "photoreceptor inner segment membrane" evidence=ISS] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0046872 GO:GO:0007601 GO:GO:0007186 GO:GO:0004930 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GO:GO:0060342 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:AY159786 ProteinModelPortal:Q8HY69 SMR:Q8HY69 Uniprot:Q8HY69)

HSP 1 Score: 72.7886 bits (177), Expect = 1.886e-14
Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ FIIP  +  +    ++  +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFIIPLTVIFFCYGQLVFTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTHQGSDFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:RHO "Rhodopsin" species:9463 "Otolemur crassicaudatus" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS] [GO:0042622 "photoreceptor outer segment membrane" evidence=ISS] [GO:0060342 "photoreceptor inner segment membrane" evidence=ISS] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0046872 GO:GO:0007601 GO:GO:0007186 GO:GO:0004930 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GO:GO:0060342 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:AB112594 EMBL:AB112591 ProteinModelPortal:Q769E8 SMR:Q769E8 Uniprot:Q769E8)

HSP 1 Score: 72.4034 bits (176), Expect = 3.049e-14
Identity = 37/119 (31.09%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP F+  +    ++  +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     +   I+   P  FAK+   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFFIPLFVIFFCYGQLVFTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY-IFTHQGSNFGPIFMTLPAFFAKTASIYNPVIYIMMNKQFRTCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:rho "Rhodopsin" species:8355 "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601 GO:GO:0004930 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:S62229 EMBL:L04692 EMBL:L07770 EMBL:U23808 PIR:I51200 UniGene:Xl.326 ProteinModelPortal:P29403 SMR:P29403 IntAct:P29403 MINT:MINT-6824795 Xenbase:XB-GENE-966893 Uniprot:P29403)

HSP 1 Score: 72.4034 bits (176), Expect = 3.205e-14
Identity = 40/120 (33.33%), Postives = 70/120 (58.33%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD----VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ I+ F IP  +  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA+V+ Y +F        PV  TV P  FAKS   +NP IYI++NK+F+  ++
Sbjct:  203 FVIYMFIVHFTIPLIVIFFCYGRLLCTVKEAAAQQQ--ESLTTQKAEKEVTRMVVIMVVFFLICWVPYAYVAFY-IFTHQGSNFGPVFMTV-PAFFAKSSAIYNPVIYIVLNKQFRNCLI 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:rho "rhodopsin" species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA] [GO:0007601 "visual perception" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA] [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0009584 "detection of visible light" evidence=IDA] [GO:0016038 "absorption of visible light" evidence=IDA] [GO:0008020 "G-protein coupled photoreceptor activity" evidence=IDA] [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA] [GO:0001750 "photoreceptor outer segment" evidence=IDA] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-990415-271 GO:GO:0016021 GO:GO:0007601 GO:GO:0018298 GO:GO:0001750 GO:GO:0007602 GO:GO:0008020 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GO:GO:0016038 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:BC045288 EMBL:BC164171 EMBL:AB087811 UniGene:Dr.354 InParanoid:Q8AV67 Uniprot:Q8AV67)

HSP 1 Score: 72.0182 bits (175), Expect = 3.834e-14
Identity = 37/119 (31.09%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ I+ F IP  +  +    ++C +K+   + +  + + TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     +   ++   P  FAK+   +NP IYI MNK+F+  M+
Sbjct:  203 FVIYMFIVHFFIPLIVIFFCYGRLVCTVKEAAAQQQ--ESETTQRAEREVTRMVIIMVIAFLICWVPYAGVAWY-IFTHQGSEFGPVFMTLPAFFAKTSAVYNPCIYICMNKQFRHCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. GO
Match: - (symbol:RHO "Rhodopsin" species:9615 "Canis lupus familiaris" [GO:0004930 "G-protein coupled receptor activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007601 "visual perception" evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0042622 "photoreceptor outer segment membrane" evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IEA] [GO:0060342 "photoreceptor inner segment membrane" evidence=ISS] [GO:0071482 "cellular response to light stimulus" evidence=IEA] InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0005794 GO:GO:0046872 GO:GO:0007601 GO:GO:0006468 GO:GO:0004930 GO:GO:0060041 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622 GO:GO:0071482 HOGENOM:HOG000253932 HOVERGEN:HBG107442 InterPro:IPR027430 PROSITE:PS00238 GeneTree:ENSGT00710000106574 OrthoDB:EOG72NRQJ TreeFam:TF324998 CTD:6010 eggNOG:NOG311294 KO:K04250 GO:GO:0060342 Gene3D:4.10.840.10 InterPro:IPR019477 Pfam:PF10413 EMBL:X71380 EMBL:Y09004 EMBL:AY092841 PIR:S32696 RefSeq:NP_001008277.1 RefSeq:XP_005632092.1 UniGene:Cfa.7396 ProteinModelPortal:P32308 SMR:P32308 Ensembl:ENSCAFT00000007461 GeneID:493763 KEGG:cfa:493763 NextBio:20865480 Uniprot:P32308)

HSP 1 Score: 72.0182 bits (175), Expect = 3.952e-14
Identity = 38/119 (31.93%), Postives = 67/119 (56.30%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  +  +    ++  +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFAIPMIVIFFCYGQLVFTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTHQGSDFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592928682|gb|GAXK01029863.1| (TSA: Calanus finmarchicus comp933788_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 84.3445 bits (207), Expect = 4.591e-19
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLE-HRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRV--FIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            Y +Y+   GF  P  I + T   I+  ++K M   H    R   + ++ +I  M+L+MV  +  CW PYA + M  V  +  ++P+  TVFP+QFAKS + WNP IY++MNK F+K  +
Sbjct:  329 YNMYLFTAGFFFPLMIIILTGVRIVFIVQKHMSGIHDPTLRDGAKKKEQKIFNMILIMVSVYVFCWGPYAILCMVGVLGYGENIPLYMTVFPLQFAKSAILWNPIIYVVMNKAFQKAFI 685

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592924532|gb|GAXK01033883.1| (TSA: Calanus finmarchicus comp1845792_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 80.1073 bits (196), Expect = 7.303e-18
Identity = 54/152 (35.53%), Postives = 86/152 (56.58%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKK---TMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVF--IGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIPMQKTFPNASDPTMNENMESQQSIE 148
            Y +++  LGF +P  I + +SFS+I  +K+   T++   +  RK   +R  ++ RMV  +V  F VCW PYA +S+  +F    D+P+I TVFP+QFAKS + WNP IY+IMN  F+      +   P+        D  + + M+S+  +E
Sbjct:  217 YNIFLFSLGFFLPLVIIIISSFSVISIIKENISTIISQDI--RKAAMERHYKVVRMVCALVSVFVVCWTPYALLSLAGIFGFSQDIPIILTVFPLQFAKSSILWNPVIYVIMNPMFQS--AAKEHMAPLNWLLGKLGDKDL-DTMDSEADVE 657

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592924533|gb|GAXK01033882.1| (TSA: Calanus finmarchicus comp1845792_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 1.576e-17
Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKK---TMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVF--IGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFK 113
            Y +++  LGF +P  I + +SFS+I  +K+   T++   +  RK   +R  ++ RMV  +V  F VCW PYA +S+  +F    D+P+I TVFP+QFAKS + WNP IYI MNK F+
Sbjct:  217 YNIFLFSLGFFLPLVIIIISSFSVISIIKENISTIISQDI--RKAAMERHYKVVRMVCALVSVFVVCWTPYALLSLAGIFGFSQDIPIILTVFPLQFAKSSILWNPVIYICMNKSFQ 561

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592939723|gb|GAXK01018830.1| (TSA: Calanus finmarchicus comp2874191_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.1738 bits (178), Expect = 4.926e-15
Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 0

Query:   21 TSFSIICCMKKTMLEHRVP-KRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRV--FIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFK 113
            TS S+I  ++K M        +K  + R+ ++  MVL MV  F  CW PYA +S+  V  F   VP+  TVFPVQFAK  + WNP IYI MN  F+
Sbjct:  747 TSLSVILALRKNMTGISSEFVKKGAERRERQVLIMVLTMVAVFLFCWGPYAVLSIVGVLGFDKHVPLYMTVFPVQFAKLSILWNPVIYICMNTSFQ 1034

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592773741|gb|GAXK01180827.1| (TSA: Calanus finmarchicus comp8832817_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 1.534e-14
Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPK-RKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRV--FIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKK 114
            Y +++   GF +P FI   +S S++  +K+ +    V   R     ++ ++  MV+ +   F  CW PYA +S+  +  F   +P   TVFP+Q +KS + WNP I++ MN  F+ 
Sbjct:   46 YNIFLFTFGFFLPLFIITISSISVVNTVKQALGTICVGDIRTKAMKKQFKVTIMVITLASVFMFCWTPYAILSLAAILGFSKAIPASLTVFPLQMSKSSILWNPVIFVFMNPMFQS 393

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592799271|gb|GAXK01155297.1| (TSA: Calanus finmarchicus comp1535865_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 66.2402 bits (160), Expect = 1.461e-12
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMK-KTMLEHRV--PKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVF-----PVQFAKSGVCWNPFIYIIMNKEFKKEMVL 118
            Y+ YI + GFI+P  +       II  +K K+ +      P R++ +D+K  I  MV  M+L F  CWFPYA +S+     G  P     F     P    KS VC +PFIY  +N +F+ EM++
Sbjct:   71 YVFYIYMFGFIVPLAVIFTCYLKIIKTLKIKSRMNETAATPTRRHGRDKKLTI--MVAAMILSFICCWFPYACISIAET-AGFKPRSSLSFYILAIPTMLTKSAVCIDPFIYFGLNPQFRAEMLV 436

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592838297|gb|GAXK01119247.1| (TSA: Calanus finmarchicus comp1461162_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 65.4698 bits (158), Expect = 4.419e-12
Identity = 43/138 (31.16%), Postives = 75/138 (54.35%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTS---FSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRV--FIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKK-------EMVLDQIGIPMQK 127
            Y + I I+GF +P  + ++TS   + +I    KT+    V   K    ++ +I +M+L+M+  F  CW PYA++++  V  +   VP+ +TV P  F+KS + WN  IYI MN +F+        E   D++G+ + +
Sbjct:  557 YTMAIFIVGFFLPLSVIVFTSADLYYLIHKHFKTIEGPSVELCKIVTKKERQILKMMLVMIGMFLFCWTPYAYLALTGVLGYSKTVPLFFTVVPFLFSKSVIVWNALIYIFMNIKFQTAALELLPEGFADKLGVILGR 970

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592799270|gb|GAXK01155298.1| (TSA: Calanus finmarchicus comp1535865_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 56.6102 bits (135), Expect = 4.818e-10
Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMK-KTMLEHRV--PKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVF-----PVQFAKSGVCWNPFIYIIMNKEFKKEM 116
            Y+ YI + GFI+P  +       II  +K K+ +      P R++ +D+K  I  MV  M+L F  CWFPYA +S+     G  P     F         +K+ VC +P IY  +N +F+ E+
Sbjct:   71 YVFYIYMFGFIVPLAVIFTCYLKIIKTLKIKSRMNETAATPTRRHGRDKKLTI--MVAAMILSFICCWFPYACISIAET-AGYTPKSTHSFYILAISTMLSKTSVCVDPIIYFWLNPQFQGEL 430

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592801374|gb|GAXK01153194.1| (TSA: Calanus finmarchicus comp512546_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 54.6842 bits (130), Expect = 1.659e-9
Identity = 27/77 (35.06%), Postives = 41/77 (53.25%), Query Frame = 0

Query:   41 RKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVF--IGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKE 115
            R     R+S+   MV  +   F  CW  YA +S+  +F     +P+ +TV P+QFAK+ + WN  I +IMN  F+  
Sbjct:   45 RLAAMQRQSKAIVMVATLSGVFIFCWSAYAVLSLASIFGFAESIPLSFTVIPLQFAKTSILWNAIILVIMNPMFQSA 275

[Close]

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Match: gi|592781297|gb|GAXK01173271.1| (TSA: Calanus finmarchicus comp132428_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 1.023e-6
Identity = 33/122 (27.05%), Postives = 63/122 (51.64%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMY-----RVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVL 118
            Y+++++I+  +   FI M     + C ++ +       +  N+ D  SRI + + L+V    +CWFP AF ++      ++   +   ++TVF +       C NPF+Y I+ K+FKK+ V+
Sbjct: 2498 YVIFLMIINGV-AFFILMGCYLKMYCAIRGS-------QAWNSND--SRIAKRMALLVFTDFICWFPIAFFALTAACGAQLISLEGAKVFTVFVLPLNS---CCNPFLYAILTKQFKKDCVM 2824

[Close]

BLAST of EMLSAG00000003196 vs. L. salmonis peptides
Match: EMLSAP00000003196 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1777:8393:16679:-1 gene:EMLSAG00000003196 transcript:EMLSAT00000003196 description:"maker-LSalAtl2s1777-augustus-gene-0.1")

HSP 1 Score: 306.99 bits (785), Expect = 5.169e-108
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0

Query:    1 MYLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIPMQKTFPNASDPTMNENMESQQSIEL 149
            MYLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIPMQKTFPNASDPTMNENMESQQSIEL
Sbjct:    1 MYLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIPMQKTFPNASDPTMNENMESQQSIEL 149

[Close]

BLAST of EMLSAG00000003196 vs. L. salmonis peptides
Match: EMLSAP00000002544 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1500:31075:41981:1 gene:EMLSAG00000002544 transcript:EMLSAT00000002544 description:"maker-LSalAtl2s1500-augustus-gene-0.3")

HSP 1 Score: 295.819 bits (756), Expect = 1.476e-103
Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 0

Query:    1 MYLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIPMQKTFPNASDPTMNENMESQQSIEL 149
            MYLVYIL +GFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKN QDRK+RINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKK+MVLD+IGIPMQKTFPNASDPTMNEN+ESQQSI+L
Sbjct:    1 MYLVYILTVGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNAQDRKARINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKQMVLDKIGIPMQKTFPNASDPTMNENIESQQSIKL 149

[Close]

BLAST of EMLSAG00000003196 vs. L. salmonis peptides
Match: EMLSAP00000012032 (pep:novel supercontig:LSalAtl2s:LSalAtl2s856:52902:115478:1 gene:EMLSAG00000012032 transcript:EMLSAT00000012032 description:"maker-LSalAtl2s856-augustus-gene-1.28")

HSP 1 Score: 52.7582 bits (125), Expect = 8.213e-9
Identity = 36/118 (30.51%), Postives = 60/118 (50.85%), Query Frame = 0

Query:    7 LILGFIIPSFIFMYTSFS-IICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSM-----YRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVL 118
            L LG+++   +    +FS ++ C  K     R  +  N+ D  SRI + + L+V    +CW P AF S+      R+   +   ++TVF +       C NPF+Y I+ K+FKK+ V+
Sbjct:  384 LSLGYVVFLMVINGVAFSXLMGCYLKMYCAIRGSQAWNSND--SRIAKRMALLVFTDFICWAPIAFFSLTAAFGVRLVSLEGAKVFTVFVLPLNS---CCNPFLYAILTKQFKKDCVM 496

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|129205|sp|P22328.1|OPSD_CHICK (RecName: Full=Rhodopsin)

HSP 1 Score: 77.7962 bits (190), Expect = 1.531e-16
Identity = 39/119 (32.77%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  +  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFMIPLAVIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|2499375|sp|P79863.1|OPSD_LEUER (RecName: Full=Rhodopsin)

HSP 1 Score: 77.411 bits (189), Expect = 2.260e-16
Identity = 39/119 (32.77%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIG---DVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  +  +    ++C +K+   + +  + ++TQ  +  + RMV++MV+ F +CW PYA V+ Y +FI    D    +   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFTIPLIVIFFCYGRLVCTVKEAAAQQQ--ESESTQRAEREVTRMVIIMVVAFLICWVPYASVAFY-IFINQGCDFTPFFMTVPAFFAKSSAVYNPLIYILMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|417421|sp|P32309.1|OPSD_CARAU (RecName: Full=Rhodopsin)

HSP 1 Score: 76.2554 bits (186), Expect = 5.444e-16
Identity = 39/119 (32.77%), Postives = 69/119 (57.98%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ I+ FIIP  +  +    ++C +K+   +H   + + TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     +   ++   P  FAK+   +NP IYI MNK+F+  M+
Sbjct:  203 FVIYMFIVHFIIPLIVIFFCYGRLVCTVKEAAAQHE--ESETTQRAEREVTRMVVIMVIGFLICWIPYASVAWY-IFTHQGSEFGPVFMTLPAFFAKTAAVYNPCIYICMNKQFRHCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|2499369|sp|Q90245.1|OPSD_AMBTI (RecName: Full=Rhodopsin)

HSP 1 Score: 75.0998 bits (183), Expect = 1.680e-15
Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIG---DVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  I  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI++NK+F+  M+
Sbjct:  203 FVIYMFLVHFTIPLMIIFFCYGRLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVVAFLICWVPYASVAFY-IFSNQGTDFGPIFMTVPAFFAKSSAIYNPVIYIVLNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|3024302|sp|P56516.1|OPSD_RANTE (RecName: Full=Rhodopsin)

HSP 1 Score: 74.7146 bits (182), Expect = 1.714e-15
Identity = 40/120 (33.33%), Postives = 71/120 (59.17%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD----VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA+V+ Y +F        P+  TV P  FAKS   +NP IYI++NK+F+  M+
Sbjct:  203 FVIYMFVVHFLIPLIIITFCYGRLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIFFLICWVPYAYVAFY-IFCNQGSEFGPIFMTV-PAFFAKSSAIYNPVIYIMLNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|400680|sp|P31355.1|OPSD_LITPI (RecName: Full=Rhodopsin)

HSP 1 Score: 74.7146 bits (182), Expect = 1.819e-15
Identity = 38/119 (31.93%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA+V+ Y +F     +   I+   P  FAKS   +NP IYI++NK+F+  M+
Sbjct:  203 FVIYMFVVHFLIPLIIISFCYGRLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIFFLICWVPYAYVAFY-IFTHQGSEFGPIFMTVPAFFAKSSAIYNPVIYIMLNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|1709479|sp|P51470.1|OPSD_LITCT (RecName: Full=Rhodopsin)

HSP 1 Score: 74.7146 bits (182), Expect = 1.950e-15
Identity = 38/119 (31.93%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA+V+ Y +F     +   I+   P  FAKS   +NP IYI++NK+F+  M+
Sbjct:  203 FVIYMFVVHFLIPLIIISFCYGRLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVVIMVIFFLICWVPYAYVAFY-IFTHQGSEFGPIFMTVPAFFAKSSAIYNPVIYIMLNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|1709476|sp|P52202.1|OPSD_ALLMI (RecName: Full=Rhodopsin)

HSP 1 Score: 74.7146 bits (182), Expect = 2.175e-15
Identity = 38/119 (31.93%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  +  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFAIPLAVIFFCYGRLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVVSFLICWVPYASVAFY-IFSNQGSDFGPVFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|129204|sp|P02699.1|OPSD_BOVIN (RecName: Full=Rhodopsin)

HSP 1 Score: 74.7146 bits (182), Expect = 2.191e-15
Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ FIIP  +  +    ++  +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAK+   +NP IYI+MNK+F+  MV
Sbjct:  203 FVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY-IFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMV 318

[Close]

BLAST of EMLSAG00000003196 vs. SwissProt
Match: gi|10720155|sp|O93441.1|OPSD_GALML (RecName: Full=Rhodopsin)

HSP 1 Score: 73.559 bits (179), Expect = 4.588e-15
Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD----VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  I  +    ++C +K    + +  + + TQ  +  + RMV++MV+ F +CW PYA V++Y +F        PV  T+ P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFSIPLTIIFFCYGRLVCTVKAAAAQQQ--ESETTQRAEREVTRMVVIMVIGFLICWLPYASVALY-IFNNQGSEFGPVFMTI-PSFFAKSSALYNPLIYILMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: EAA07662.5 (AGAP002443-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 71.633 bits (174), Expect = 1.853e-14
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVI---YTVFPVQFAKSGVCWNPFIYIIMNKEFK 113
            Y++++ I G I+P  + +Y+  +I+  M+K     RV  R N  +R  R+  MV +M++ F V W PYA  ++   F G   +I     V P   AKS +C+NP IY+ MN +F+
Sbjct:  206 YIIFLFIFGLILPLAVIIYSYINIVLEMRKN--SARV-GRVNRAER--RVTSMVAVMIVAFMVAWTPYAIFALIEQF-GPPELIGPGLAVLPALVAKSSICYNPIIYVGMNTQFR 314

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: XP_006567386.1 (PREDICTED: pteropsin isoform X4 [Apis mellifera])

HSP 1 Score: 70.0922 bits (170), Expect = 2.605e-14
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRK-SRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVP-VIYTVFPVQFAKSGVCWNPFIYIIMNKEFKK 114
            Y+ ++ +LG I+P F  + +  +I+  +KK      V KR     R+ ++I +MV LM+  F + W PYA +++   +    P     V P   AKS +C+NP IY  +N +F +
Sbjct:  137 YIGFLFVLGLIVPVFTIVSSYAAIVLTLKK------VRKRAGASGRREAKITKMVALMITAFLLAWSPYAALAIAAQYFNAKPSATVAVLPALLAKSSICYNPIIYAGLNNQFSR 245

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: XP_006567384.1 (PREDICTED: pteropsin isoform X2 [Apis mellifera])

HSP 1 Score: 69.707 bits (169), Expect = 4.836e-14
Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRK-SRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVP-VIYTVFPVQFAKSGVCWNPFIYIIMNKEFKK--EMVLDQIGIPMQKTFPNASDPTMNE-NMESQQ 145
            Y+ ++ +LG I+P F  + +  +I+  +KK      V KR     R+ ++I +MV LM+  F + W PYA +++   +    P     V P   AKS +C+NP IY  +N +F +  + + D  G   +   P++    +   N + Q+
Sbjct:  186 YIGFLFVLGLIVPVFTIVSSYAAIVLTLKK------VRKRAGASGRREAKITKMVALMITAFLLAWSPYAALAIAAQYFNAKPSATVAVLPALLAKSSICYNPIIYAGLNNQFSRFLKKIFDARG--SRTAVPDSQHTALTALNRQEQR 326

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: NP_001035057.1 (pteropsin [Apis mellifera])

HSP 1 Score: 69.707 bits (169), Expect = 4.863e-14
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRK-SRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVP-VIYTVFPVQFAKSGVCWNPFIYIIMNKEFKK 114
            Y+ ++ +LG I+P F  + +  +I+  +KK      V KR     R+ ++I +MV LM+  F + W PYA +++   +    P     V P   AKS +C+NP IY  +N +F +
Sbjct:  187 YIGFLFVLGLIVPVFTIVSSYAAIVLTLKK------VRKRAGASGRREAKITKMVALMITAFLLAWSPYAALAIAAQYFNAKPSATVAVLPALLAKSSICYNPIIYAGLNNQFSR 295

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: EAA08098.2 (AGAP002444-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 66.2402 bits (160), Expect = 1.110e-12
Identity = 40/145 (27.59%), Postives = 71/145 (48.97%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVI---YTVFPVQFAKSGVCWNPFIYIIMNKEFK----------KEMVLDQIGIPMQKTFPNAS 133
            Y++++ + G ++P  + +Y+  +II  M++     RV +    + R   +  MV +M++ F V W PYA  ++   F G   +I     V P   AKS +C+NP IY+ MN +F+          ++   DQ    MQ+    +S
Sbjct:  188 YIIFLFVFGLVVPLIVIVYSYTNIIVNMREN--SARVGRINRAEQR---VTSMVAVMIVAFMVAWTPYAIFALIEQF-GPPELIGPGLAVLPALVAKSSICYNPIIYVGMNTQFRAAFSRVRNKGQQAAADQNTTTMQRELTKSS 326

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: EFX80367.1 (pteropsin7 [Daphnia pulex])

HSP 1 Score: 62.7734 bits (151), Expect = 1.795e-11
Identity = 32/124 (25.81%), Postives = 58/124 (46.77%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD------------VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFK 113
            Y++Y+   G  +P  + + +  SI+  +KK        +  N+   + R+  MV  MV  F   W PY+ ++++  FIG+            +   +   P  FAKS   +NP IY ++N +F+
Sbjct:  217 YILYMFAFGLFVPFLVIVVSYVSILRVVKK--------RSSNSDAAEKRVTVMVACMVGAFLAAWTPYSILALFETFIGEDDNNFFDYYVGAISPAFATIPSLFAKSSAVFNPLIYGLLNTQFR 332

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: EFX80369.1 (pteropsin8 [Daphnia pulex])

HSP 1 Score: 62.3882 bits (150), Expect = 2.423e-11
Identity = 32/124 (25.81%), Postives = 57/124 (45.97%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGD------------VPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFK 113
            Y++Y+   G  +P  + + +  SI+          RV K+ N+   + R+  MV  MV  F   W PY+ ++++  FIG+            +   +   P  FAK+    NP IY ++N +F+
Sbjct:  247 YILYMFTFGLFVPMVVIISSYVSIL----------RVVKKSNSDAAEKRVTVMVACMVGAFLAAWTPYSILALFETFIGEDDNNFFDYYVGAISPAFATIPSLFAKTSAVLNPLIYGLLNTQFR 360

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: gb|KYB28034.1| (Opsin Rh3-like Protein [Tribolium castaneum])

HSP 1 Score: 61.2326 bits (147), Expect = 5.824e-11
Identity = 33/116 (28.45%), Postives = 62/116 (53.45%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIY---TVFPVQFAKSGVCWNPFIYIIMNKEFKK 114
            Y++Y+   G  +P  I  ++  +II  M++     RV +    +++   +  M+ +M++ F   W PYA +++   F GD  ++     V P   AKS +C+NP IYI +N +F++
Sbjct:  184 YILYLFAFGLFLPLVIITFSYVNIILTMRRNA-AFRVGQVSKAENK---VAYMIFIMIIAFLTAWSPYAIMALIVQF-GDAALVTPGMAVIPALLAKSSICYNPVIYIGLNAQFQQ 294

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: EAA06194.6 (AGAP000351-PB [Anopheles gambiae str. PEST])

HSP 1 Score: 56.225 bits (134), Expect = 3.811e-9
Identity = 35/131 (26.72%), Postives = 62/131 (47.33%), Query Frame = 0

Query:    2 YLVYILILGFIIP--SFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPV------QFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIP 124
            Y + +L   FI+P    IF YT  +I+   K+   E    + +     K ++ +M++ +V+ F +CW P+ F+ + +     +P  + + P         A S  C+NP IY  MN  F+   +L   G+P
Sbjct:  304 YTIALLTTQFIVPLVVLIFTYTRIAIVVWGKRPPGEAENSRDQRMAKSKRKMIKMMVTVVIVFTICWLPFNFLMLMK-----LPSSWDLLPYFWFAFHWLAMSHSCYNPIIYCYMNARFRSGFILVLHGVP 429

[Close]

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Match: gb|KYB28815.1| (hypothetical protein TcasGA2_TC034574 [Tribolium castaneum])

HSP 1 Score: 56.225 bits (134), Expect = 4.271e-9
Identity = 43/154 (27.92%), Postives = 70/154 (45.45%), Query Frame = 0

Query:    5 YILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQ---------DRKSRINRMVLLMVLCFQVCWFPYAFVSM---YRVF-IGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKE--MVLDQIGIPMQKTFPNASDPTMNENMES 143
            + L++ FIIP  I  Y    I        L  R   +  T+         ++K R NRM++ MV  F +CWFP   +++   Y VF  G    ++       A S  C+NPF+Y  +N+ F+KE  ++L  I       + N  + T++  + S
Sbjct:  197 FTLVMQFIIPFCIIGYCYSRI-----SGRLNERAKSKPGTKSARREEADKEKKKRTNRMLIAMVTIFGICWFPLNLINVVHDYYVFERGSYFHLFFFLAHCLAMSSTCYNPFLYAWLNENFRKEFKVILPCILRSATNRYCNGDERTLDTLLHS 345

HSP 2 Score: 55.0694 bits (131), Expect = 1.085e-8
Identity = 36/118 (30.51%), Postives = 58/118 (49.15%), Query Frame = 0

Query:   40 KRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVP----VIYTVFPVQ-FAKSGVCWNPFIYIIMNKEFKKE--MVL-----DQIGIPMQKTFPNASDPTMNENMESQQ 145
            K +  ++RK R NRM++ MV  F + W P   +++   F   +      + + F V   A S  C+NPF+Y  +N+ F+KE   VL       + +P  +     S+ T N N E+QQ
Sbjct:  608 KEEADRERKRRTNRMLIAMVAIFLISWLPLNLINLINDFYDQIGNWEYYLLSFFLVHALAMSSTCYNPFLYAWLNENFRKEFKQVLPCCDSGSMRVPPGRLGNWRSERTCNGNNETQQ 725

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|465980478|gb|EMP35582.1| (hypothetical protein UY3_07200 [Chelonia mydas])

HSP 1 Score: 85.1149 bits (209), Expect = 1.740e-16
Identity = 39/119 (32.77%), Postives = 69/119 (57.98%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct: 1070 FVIYMFVVHFLIPLIIISFCYGRLVCTVKEAAAQQQ--ESATTQKAEREVTRMVIIMVIAFLICWVPYASVAFY-IFTHQGSDFGPVFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 1185

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|701424240|ref|XP_010001686.1| (PREDICTED: rhodopsin [Chaetura pelagica])

HSP 1 Score: 84.7297 bits (208), Expect = 2.299e-16
Identity = 38/119 (31.93%), Postives = 69/119 (57.98%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  +  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFTIPLTVIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVISFLICWVPYASVAFY-IFTNQGSDFGPVFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|1058275484|gb|AOF40364.1| (rhodopsin 1, partial [Dasypeltis scabra])

HSP 1 Score: 80.1073 bits (196), Expect = 3.586e-15
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            Y++Y+ ++ FIIP  +  +    ++C +K+   + +  +   TQ  +  + RMV+LMV+ F VCW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 YVIYMFLVHFIIPLIVIFFCYGRLVCTVKEAAAQQQ--ESATTQKAEREVTRMVILMVVSFLVCWVPYASVAFY-IFTHQGSDFGPVFMTVPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|987390424|gb|AMD82570.1| (rod visual pigment, partial [Hydrophis peronii])

HSP 1 Score: 80.1073 bits (196), Expect = 3.790e-15
Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ FI P  I  +   S++C +K+   + +      TQ  +  + RMV+LMV+ F VCW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFLVHFITPLIIIFFCYGSLVCTVKEAAAQQQ--GSATTQKAEKEVTRMVILMVIAFLVCWVPYASVAFY-IFTHQGSDFGPVFMTIPAFFAKSSAVYNPMIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|1002599804|ref|XP_015678958.1| (PREDICTED: rhodopsin [Protobothrops mucrosquamatus])

HSP 1 Score: 79.337 bits (194), Expect = 9.919e-15
Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            Y++Y+ ++ FIIP  I  +    ++C +K+   + +  +   TQ  +  + RMV++MV+ F VCW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MN++F+  M+
Sbjct:  203 YVIYMFLVHFIIPLTIIFFCYGRLLCTVKEAAAQQQ--ESATTQKAEREVTRMVIIMVIAFLVCWVPYASVAFY-IFTHQGSDFGPVFMTIPAFFAKSSAVYNPVIYIVMNRQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|1058275492|gb|AOF40368.1| (rhodopsin 1, partial [Lycophidion laterale])

HSP 1 Score: 78.9518 bits (193), Expect = 1.231e-14
Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ FIIP  +  +    ++C +K+   + +  +   TQ  +  + RMV+LMV+ F VCW PYA V+ Y +F     D   ++   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFLVHFIIPLTVIFFCYGRLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVILMVIAFLVCWVPYASVAFY-IFTHQGSDFGPVFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|389499458|gb|AFK82741.1| (rhodopsin, partial [Chlamydera nuchalis])

HSP 1 Score: 78.9518 bits (193), Expect = 1.240e-14
Identity = 40/119 (33.61%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  187 FVIYMFVVHFMIPLLIIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 302

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|389499454|gb|AFK82739.1| (rhodopsin, partial [Sericulus chrysocephalus])

HSP 1 Score: 78.9518 bits (193), Expect = 1.348e-14
Identity = 40/119 (33.61%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  198 FVIYMFVVHFMIPLLIIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 313

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|690433717|ref|XP_009318377.1| (PREDICTED: rhodopsin [Pygoscelis adeliae] >gi|679134596|gb|KFW64393.1| Rhodopsin [Pygoscelis adeliae])

HSP 1 Score: 78.9518 bits (193), Expect = 1.386e-14
Identity = 41/119 (34.45%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F IP  I  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F VCW PYA V++Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  203 FVIYMFVVHFTIPLSIIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLVCWVPYASVAIY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 318

[Close]

BLAST of EMLSAG00000003196 vs. nr
Match: gi|389499460|gb|AFK82742.1| (rhodopsin, partial [Chlamydera maculata])

HSP 1 Score: 78.5666 bits (192), Expect = 1.423e-14
Identity = 40/119 (33.61%), Postives = 70/119 (58.82%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFI---GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +++Y+ ++ F+IP  I  +   +++C +K+   + +  +   TQ  +  + RMV++MV+ F +CW PYA V+ Y +F     D   I+   P  FAKS   +NP IYI+MNK+F+  M+
Sbjct:  196 FVIYMFVVHFMIPLLIIFFCYGNLVCTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY-IFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMI 311

[Close]

BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold587_size153100-snap-gene-0.29 (protein:Tk01031 transcript:maker-scaffold587_size153100-snap-gene-0.29-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_302649")

HSP 1 Score: 103.605 bits (257), Expect = 8.948e-27
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPK--RKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIPM 125
            Y  Y+L LGF +P  I ++TS  +I  +K  +         R+N Q R++++NRMVL M+  F V W PYA + +YR+ +G    + + FP+ FAKS +CWNP IY++MN +     +    GIP+
Sbjct:  913 YNWYMLSLGFFLPMSIIVFTSVCVIVNLKMNVANQASSSVIRRNAQKRENKVNRMVLFMISSFSVSWTPYAVMCIYRIIVGHTTPLMSAFPLLFAKSSICWNPIIYVLMNNQVADAQIRLSDGIPV 1038

[Close]

BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold303_size215788-snap-gene-1.12 (protein:Tk07121 transcript:maker-scaffold303_size215788-snap-gene-1.12-mRNA-1 annotation:"c-opsin")

HSP 1 Score: 84.3445 bits (207), Expect = 5.486e-20
Identity = 40/117 (34.19%), Postives = 69/117 (58.97%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLE-HRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            Y  Y++I GF  P  +  ++S S++  M++   +   +  RK+   R++++N MVL+M+  F  CW PYA +S+Y++  G V    + FP+ F KS +C NP IY+ MN  F+  ++
Sbjct:  305 YNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALI 421

[Close]

BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold321_size207582-snap-gene-1.25 (protein:Tk05191 transcript:maker-scaffold321_size207582-snap-gene-1.25-mRNA-1 annotation:"lutropin-choriogonadotropic hormone receptor-like")

HSP 1 Score: 55.8398 bits (133), Expect = 4.131e-10
Identity = 37/118 (31.36%), Postives = 62/118 (52.54%), Query Frame = 0

Query:    7 LILGFIIPSFIFMYTSFS-IICCMKKTMLEHRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVF-----IGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMVL 118
            L LG++I   +    +FS ++ C  K     R  +  N+ D  SRI + + L+V    +CWFP AF+S++  F       +   ++T+F +       C NPF+Y I+ K+FKK+ V+
Sbjct:  499 LSLGYVIFLMLINGLAFSTLMGCYLKMYCAIRGSQAWNSND--SRIAKRMALLVFTDFLCWFPIAFLSLFSCFGLHLISLEQAKVFTIFILPLNS---CCNPFLYAILTKQFKKDCVM 611

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BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold503_size153465-snap-gene-0.17 (protein:Tk08626 transcript:maker-scaffold503_size153465-snap-gene-0.17-mRNA-1 annotation:"hypothetical protein TcasGA2_TC007259")

HSP 1 Score: 50.447 bits (119), Expect = 2.475e-8
Identity = 34/127 (26.77%), Postives = 67/127 (52.76%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNT-QDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYT---VFPVQFAKSGVCWNPFIYIIMNKEFKKEMVLDQIGIP 124
            Y  Y+L +GF++P  +   TS +++  MK+     ++   K++   R+ R+ +MV+ M   F   W PYA  ++  V  G   ++ +   V P+  AK+    NP +Y+++N +F++      +G+P
Sbjct:   74 YTSYLLFMGFVVPGVVITVTSVTLVVVMKRHSAAIQLASLKSSMAKRELRVTKMVMAMTFSFLGVWSPYAICAIL-VIGGKSDLLNSPAAVVPLILAKTSTFTNPMLYVMLNPQFQRAF-RRMVGLP 198

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BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold152_size304267-processed-gene-0.11 (protein:Tk10103 transcript:snap_masked-scaffold152_size304267-processed-gene-0.11-mRNA-1 annotation:"somatostatin receptor type 2")

HSP 1 Score: 48.1358 bits (113), Expect = 1.960e-7
Identity = 32/124 (25.81%), Postives = 58/124 (46.77%), Query Frame = 0

Query:    2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNTQDRKS--RINRMVLLMVLCFQVCWFPYAFVSMYRVFI------GDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
            +  Y  +LGF IP  + +   F I+   K   L+   PK K+ + +KS  ++ R+VL ++  + +CW PY    +  +F        +V V   +     + S    NP +Y  +++ FKK  +
Sbjct:  250 FTFYSFVLGFAIPLLLILV--FYILVIFK---LKTVGPKNKSREKKKSHRKVTRLVLTVITVYILCWLPYWITQLALIFTEPGHTQDNVMVAVMLLAGCLSYSNSAMNPVLYAFLSENFKKSFM 368

[Close]

BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold941_size78300-snap-gene-0.19 (protein:Tk00817 transcript:maker-scaffold941_size78300-snap-gene-0.19-mRNA-1 annotation:"prolactin-releasing peptide receptor")

HSP 1 Score: 46.595 bits (109), Expect = 5.456e-7
Identity = 34/132 (25.76%), Postives = 60/132 (45.45%), Query Frame = 0

Query:    1 MYLVYILILGFIIPSFIFMYTSFSIICCMKKTMLEHRVPKRKNT-------QDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVI---------YTVFPVQ-FAKSGVCWNPFIYIIMNKEFKKE 115
            +Y  +  I  FI+P F  ++  +S+I          R    + +       ++RK + NR+ + MV+ F  CWFP   ++    F+ D+ +          +T F     A S  C+NPF+Y  +N+ F+ E
Sbjct:  202 IYGAFTNITQFILP-FTTIFVCYSVIMARLAQRYTTRPGANRQSAAKEVVEKERKKKNNRLCVSMVVIFGTCWFPLNVIN----FLADIDLFPIFCWEYYHFTFFLCHILAMSSNCYNPFLYGWLNESFRGE 328

The following BLAST results are available for this feature:

BLAST of EMLSAG00000003196 vs. GO
BLAST of EMLSAG00000003196 vs. C. finmarchicus
BLAST of EMLSAG00000003196 vs. L. salmonis peptides
BLAST of EMLSAG00000003196 vs. SwissProt
BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
BLAST of EMLSAG00000003196 vs. nr
BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000003196 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	3.204e-16	32.77	symbol:RHO "Rhodopsin" species:9031 "Gallus gallus...	[more]
-	3.404e-16	32.77	symbol:RHO "Rhodopsin" species:9031 "Gallus gallus...	[more]
-	4.627e-15	32.77	symbol:RHO "Rhodopsin" species:9913 "Bos taurus" [...	[more]
-	1.017e-14	34.71	symbol:rhol "rhodopsin, like" species:7955 "Danio ...	[more]
-	1.627e-14	35.00	symbol:exorh "extra-ocular rhodopsin" species:7955...	[more]
-	1.886e-14	32.77	symbol:RHO "Rhodopsin" species:9301 "Sminthopsis c...	[more]
-	3.049e-14	31.09	symbol:RHO "Rhodopsin" species:9463 "Otolemur cras...	[more]
-	3.205e-14	33.33	symbol:rho "Rhodopsin" species:8355 "Xenopus laevi...	[more]
-	3.834e-14	31.09	symbol:rho "rhodopsin" species:7955 "Danio rerio" ...	[more]
-	3.952e-14	31.93	symbol:RHO "Rhodopsin" species:9615 "Canis lupus f...	[more]

Pages

BLAST of EMLSAG00000003196 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592928682\|gb\|GAXK01029863.1\|	4.591e-19	36.97	TSA: Calanus finmarchicus comp933788_c0_seq1 trans...	[more]
gi\|592924532\|gb\|GAXK01033883.1\|	7.303e-18	35.53	TSA: Calanus finmarchicus comp1845792_c0_seq2 tran...	[more]
gi\|592924533\|gb\|GAXK01033882.1\|	1.576e-17	42.74	TSA: Calanus finmarchicus comp1845792_c0_seq1 tran...	[more]
gi\|592939723\|gb\|GAXK01018830.1\|	4.926e-15	43.75	TSA: Calanus finmarchicus comp2874191_c0_seq1 tran...	[more]
gi\|592773741\|gb\|GAXK01180827.1\|	1.534e-14	31.03	TSA: Calanus finmarchicus comp8832817_c0_seq1 tran...	[more]
gi\|592799271\|gb\|GAXK01155297.1\|	1.461e-12	35.20	TSA: Calanus finmarchicus comp1535865_c0_seq1 tran...	[more]
gi\|592838297\|gb\|GAXK01119247.1\|	4.419e-12	31.16	TSA: Calanus finmarchicus comp1461162_c0_seq1 tran...	[more]
gi\|592799270\|gb\|GAXK01155298.1\|	4.818e-10	32.52	TSA: Calanus finmarchicus comp1535865_c0_seq2 tran...	[more]
gi\|592801374\|gb\|GAXK01153194.1\|	1.659e-9	35.06	TSA: Calanus finmarchicus comp512546_c0_seq2 trans...	[more]
gi\|592781297\|gb\|GAXK01173271.1\|	1.023e-6	27.05	TSA: Calanus finmarchicus comp132428_c0_seq4 trans...	[more]

Pages

BLAST of EMLSAG00000003196 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAP00000003196	5.169e-108	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1777:8393...	[more]
EMLSAP00000002544	1.476e-103	94.63	pep:novel supercontig:LSalAtl2s:LSalAtl2s1500:3107...	[more]
EMLSAP00000012032	8.213e-9	30.51	pep:novel supercontig:LSalAtl2s:LSalAtl2s856:52902...	[more]

BLAST of EMLSAG00000003196 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|129205\|sp\|P22328.1\|OPSD_CHICK	1.531e-16	32.77	RecName: Full=Rhodopsin	[more]
gi\|2499375\|sp\|P79863.1\|OPSD_LEUER	2.260e-16	32.77	RecName: Full=Rhodopsin	[more]
gi\|417421\|sp\|P32309.1\|OPSD_CARAU	5.444e-16	32.77	RecName: Full=Rhodopsin	[more]
gi\|2499369\|sp\|Q90245.1\|OPSD_AMBTI	1.680e-15	32.77	RecName: Full=Rhodopsin	[more]
gi\|3024302\|sp\|P56516.1\|OPSD_RANTE	1.714e-15	33.33	RecName: Full=Rhodopsin	[more]
gi\|400680\|sp\|P31355.1\|OPSD_LITPI	1.819e-15	31.93	RecName: Full=Rhodopsin	[more]
gi\|1709479\|sp\|P51470.1\|OPSD_LITCT	1.950e-15	31.93	RecName: Full=Rhodopsin	[more]
gi\|1709476\|sp\|P52202.1\|OPSD_ALLMI	2.175e-15	31.93	RecName: Full=Rhodopsin	[more]
gi\|129204\|sp\|P02699.1\|OPSD_BOVIN	2.191e-15	32.77	RecName: Full=Rhodopsin	[more]
gi\|10720155\|sp\|O93441.1\|OPSD_GALML	4.588e-15	34.17	RecName: Full=Rhodopsin	[more]

Pages

BLAST of EMLSAG00000003196 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 25


Match Name	E-value	Identity	Description
EAA07662.5	1.853e-14	34.78	AGAP002443-PA [Anopheles gambiae str. PEST]	[more]
XP_006567386.1	2.605e-14	31.30	PREDICTED: pteropsin isoform X4 [Apis mellifera]	[more]
XP_006567384.1	4.836e-14	27.52	PREDICTED: pteropsin isoform X2 [Apis mellifera]	[more]
NP_001035057.1	4.863e-14	31.30	pteropsin [Apis mellifera]	[more]
EAA08098.2	1.110e-12	27.59	AGAP002444-PA [Anopheles gambiae str. PEST]	[more]
EFX80367.1	1.795e-11	25.81	pteropsin7 [Daphnia pulex]	[more]
EFX80369.1	2.423e-11	25.81	pteropsin8 [Daphnia pulex]	[more]
gb\|KYB28034.1\|	5.824e-11	28.45	Opsin Rh3-like Protein [Tribolium castaneum]	[more]
EAA06194.6	3.811e-9	26.72	AGAP000351-PB [Anopheles gambiae str. PEST]	[more]
gb\|KYB28815.1\|	4.271e-9	27.92	hypothetical protein TcasGA2_TC034574 [Tribolium c...	[more]

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BLAST of EMLSAG00000003196 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|465980478\|gb\|EMP35582.1\|	1.740e-16	32.77	hypothetical protein UY3_07200 [Chelonia mydas]	[more]
gi\|701424240\|ref\|XP_010001686.1\|	2.299e-16	31.93	PREDICTED: rhodopsin [Chaetura pelagica]	[more]
gi\|1058275484\|gb\|AOF40364.1\|	3.586e-15	35.29	rhodopsin 1, partial [Dasypeltis scabra]	[more]
gi\|987390424\|gb\|AMD82570.1\|	3.790e-15	35.29	rod visual pigment, partial [Hydrophis peronii]	[more]
gi\|1002599804\|ref\|XP_015678958.1\|	9.919e-15	34.45	PREDICTED: rhodopsin [Protobothrops mucrosquamatus...	[more]
gi\|1058275492\|gb\|AOF40368.1\|	1.231e-14	34.45	rhodopsin 1, partial [Lycophidion laterale]	[more]
gi\|389499458\|gb\|AFK82741.1\|	1.240e-14	33.61	rhodopsin, partial [Chlamydera nuchalis]	[more]
gi\|389499454\|gb\|AFK82739.1\|	1.348e-14	33.61	rhodopsin, partial [Sericulus chrysocephalus]	[more]
gi\|690433717\|ref\|XP_009318377.1\|	1.386e-14	34.45	PREDICTED: rhodopsin [Pygoscelis adeliae] >gi\|6791...	[more]
gi\|389499460\|gb\|AFK82742.1\|	1.423e-14	33.61	rhodopsin, partial [Chlamydera maculata]	[more]

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BLAST of EMLSAG00000003196 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 6


Match Name	E-value	Identity	Description
maker-scaffold587_size153100-snap-gene-0.29	8.948e-27	38.10	protein:Tk01031 transcript:maker-scaffold587_size1...	[more]
maker-scaffold303_size215788-snap-gene-1.12	5.486e-20	34.19	protein:Tk07121 transcript:maker-scaffold303_size2...	[more]
maker-scaffold321_size207582-snap-gene-1.25	4.131e-10	31.36	protein:Tk05191 transcript:maker-scaffold321_size2...	[more]
maker-scaffold503_size153465-snap-gene-0.17	2.475e-8	26.77	protein:Tk08626 transcript:maker-scaffold503_size1...	[more]
snap_masked-scaffold152_size304267-processed-gene-0.11	1.960e-7	25.81	protein:Tk10103 transcript:snap_masked-scaffold152...	[more]
maker-scaffold941_size78300-snap-gene-0.19	5.456e-7	25.76	protein:Tk00817 transcript:maker-scaffold941_size7...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1777	supercontig	LSalAtl2s1777:8393..16679 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1777-augustus-gene-0.1
Biotype	protein_coding
Evidence	IEA
Note	Rhodopsin

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000003196 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000003196	EMLSAT00000003196-699043	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1777:8393..16679-

gene from alignment at LSalAtl2s1777:8393..16679-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000003196-685962 ID=EMLSAG00000003196-685962|Name=EMLSAG00000003196|organism=Lepeophtheirus salmonis|type=gene|length=8287bp|location=Sequence derived from alignment at LSalAtl2s1777:8393..16679- (Lepeophtheirus salmonis)
TGCGCCCCATCATGGGAGGATGAAAAATATCTGATGTATTTGGTCTATAT
TCTAATTCTGGGCTTCATAATTCCTTCCTTCATTTTCATGTACACGTCTT
TCAGTATCATTTGTTGTATGAAAAAGGTTAGAAGATTTGTTTCTCAAAAA
TTTTAATTACCATATTTAAAACAAAAGAATCATTCAATGATAATAATTTA
TTTGAATTATTATTTAAGGGCCCTATTTTTGGTAGTATTTCGATATTTCT
ACTCTAGGCCTGAGAAAAACGGTCCAGTTTGGTCCAGTTGAACTAAAAAA
GAAAAAAATGTTGTTTTCCATAAGTTTAAAAAAAATAATTAAAATACCAA
AAAAAAAAAAAACTTCCTAGTTACAAGGGTGACAACTTTAGCTTAATATT
ACTCAACTCGCTTTCTTCTTAGATATTGCTATCCTACAGCTAATAGTGGT
ATTTGTGTACTTCACTTCTTTCGTACTATTCTTAACTTTTTTATGGTTTA
GAAGACATCAACGTAACAAATAAGTGTCCCTCTAGAATTTTTATGTTGCG
TGAAAATGCTCTAAATTAAATATATCTAAGTTGATAAATTGAATAATTGA
TCAAAATATAATTCATACTTTCTAGGCAGTAAAATTAACCCAAGTTTCAA
TATGCTTCTTATCCAATGTACTATATTAGTATTTATTGATTAGATGGAAG
TCATATATTGACATATACTAATTATTTTTTAATATTCCTTGAATTTGGTT
TTTACCAAAAAGTAAAATAATTATCCAATCTAAATAGATTCAGGGTTGAT
CAAAAAGTAAAGGATCAGTCTTTTTTTTTACTGGACTGGACTGGACCAAA
AATATTTGAAGCCGACACAGCTAACATTTTTTTCTTACTTGTACTCAATT
TATTTACTATATTTTAACAAAAATATCATTTTATATTTTACAAATTTATT
TATCATCAGAAGAATCATGGAAGGGTAAGGCATCTGTTCCCAAATATACG
TTTTTTATATTATTTTTGGACTTTAAATGTTTGTTTGCTTTTTTTATGAA
TACTATGTTCGTTCATACCTCTTTAATAAATTTTCAAATTGTTGTTTCTT
GTAACAAAGAACTGAAAGAGATTGTTTAAATGTATGCATTTGAAGAAATC
TACAACCAAAGTTTAAATATAATTGAAAAATAAATAAAATCCCTATGTAG
GAGGTACCAACAACTATTGAAAAACATCAGTTTTTTCTAAATATCAAACA
ATGTAAAGCAGAGGTGAGTAAACTTTTTGGAAGTGGAAATTGTGGTTTTA
TATGGCTGTATTCAGAGAAGCACAATACAACACAAAAAACAACAATCGTA
TCATTTTTTATATCATATTTACTCTACCGTTAAATATTATCTAATGTTCT
AACCCTATCCAGACATCTAAATTTTGTATTTCATTAAGCATGCAAACGCA
ACGTCTAAAAGAAGTTTCGGAGCCATAGAATGAACTGCGAAAGAGTTTAT
GCTCACTCAGATGACAGTAGAATCATTTTTGCACTGACATAAACCCAATA
TGATAATGTCTTTAATGAAAACAATCTTCAAATTTCTTAAAAACTACTAC
CCCAACCAAAAATTATGTTGAGATCCACGAGAGTGCAAATTAATTCTCCT
TTTTTATTTAAAATTTAGTTCAAAATAAAAAAATATCGATAACAATTTTG
CAATTGAAACAAGTAAATAGCCATTTGTGTTCGTAGGAACACAAGTTTTT
TTTGTTGTAGAAGTTTTATATACTAGTATATCTAAGCCGAACCATCTCCA
ATAACTGACGGGAAAAGTTTTTCAACTAATTACATACATTTCAAAATTTG
TTAATGACTGTATAATATACTTGATCAACTAATATTTAAGCACACGTGAT
GATTCTAATAGCTAATTTTAAAAAATTCAGTCATGGCTGTAATAAAAAAA
AAAAAAAATAGCGTTCCCAATCATAAGCTTGTGTATAAAATCAAAAATAC
TCTATATAAGTACTTTTTAGTGGTGAGATTCGGCCTGGAAATCATATACC
TCTATAAAGACTTTTAAATTTTTCTGATTTGGTCCTGATCGGTCCTTCCA
AAAAAATGAAGACTTATAGACCCAAAAGTTATTAGATGTTATTTTACAAA
TTTTAATGAGGTTGATGCTATAGTAAATTGATACAAAAATCAAACAATAG
ATAATATTTAAATAAATTTAGCAAAGATTTTTCAGTTAAAAGATCTTCCT
AATTTTTGACTTGAGAAAGATACGGTTATTGGTCAATTAATATTGTTGAC
ATATTTATGATTTGTTTTGCAAAAATTTGTTGTGAGGGATTCTTCCCAGT
GGTTTGGAAAAAATTGAGAAAAAAAGTTATGTATTATTTTTTTTCACAAA
AAAAATCGGTCCACGGTTTCGAACAACAGTCTGGACCAAAATACGGGTCT
AAAAATCACTTAAGAACGAAACGGGAAGAAAATGGGTTCGGACAGAGTCT
CAACTAGTGATGTGTCGGTCCTTATTTATTCGGTTTAGTTTACTCCATTC
GTATGACCAACCCTATCAGTCTTTGGGATCGATCCTTAAAACTGTGTTGT
GCTAAGGACTGTCCGNTTCTAGAACTGATTTAAATGAGTAGTAAAGTTGA
GTGACATAATTAAGTACCAAACTTGTGGGTCTGAACTGAACTGGAAAAAA
TTGAAGTATTCAGTCTTAAATAAGGCTGGACRTAATAGTAGTCTCAACAC
TTGTACCTATGTATGCATAAGTAGATACATAAATAAAAAATTCTCCCAGA
CTGTGTAAAATAATAATCAAATTTTAGTTGGCAATTTGCATTACACTCCC
ACACGAACGGTTAGAATCATTAGTAATATCGGTAGGTATTTAAAAAAAGC
AAAACAATGTCATAATTTTGTGTTATAAAATTTTWTCTATGGTGTCWTTT
CGCTTNKTYTTTTTTTTTTNNTTTTTGTTTTACATAGAGACTTTTTGATG
AACAATAATAGCCAATAGAACGCCTTCTATTCAATCAATTTGCAATTTTT
CATAGAATACCAAAAATTTAAATACAAAAATAAAGAAGAATTTACGTGAA
AAAGTTCAAATTACTCTGTCACTGTCGAATAAAGATAGAAAATACTTAAT
TCGGGAGTAGAACAACATCAAATTTAGTTCATAATTGATCTCAATTTTTG
TTTTATCCAAAGTGTTGAGTAACTATGATACTGGCAAAATGTATCCGTGG
ACAAGTCGTATCAAGGTGTTAGACAATTGCTATACCGGTAATGCATTTTT
ATTGTTACTTCCAAGTATAAAAAGGTGTACTACAGATCACTGCCTTTTCT
GTCTATAAATGTATGTAGGTTTTCTTGTTGGCTTTGATTCAAGTAATGGA
TCACCGAAAAAGAAAAAAATAAACATATTTTTTCTCTACAATAATAAGTT
CAAACTTTTTTTACATCAAACCCCTTAAGGACAGTTAATCGTCCAACACG
ACTTGTTTGCAGATGCACAACGCTGGTATCACGGTGAAAATCAATATTAT
TTTAGAATATAATTGTTACTGAAAACATAACGAAATGAGAAAAACTTAAG
CTCCAAATGACTCTACGGAGTAATTTAAATTTGACTTCGTCATCATTTAT
TAGTACCCTGTGGAGCCCTAAGCCTACCTATTATTATAATAAATAATTAT
TTGTCATTTAGATAATCTATCCGTCCCAGGGCCCTTGAAATATCTATGGA
GTATATTGGCTCCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGAAATATAATTA
GTGGTGCAGTTGTCAAAAAATAATCTTTATATTTAACATGCACTCTTTTT
TTTTTAACTGAAGTCTATCTTGTTTAGTAGAATGGTTATTTAATTAAATA
GAATATATGATTAAAGTAATCGTGTGATGGATGTTTTAAAGAATAAAATA
ACTTAATTTATTTATATACTACCTGGACTTTGTCAGTTTTTTCCATGTTT
CAGGCAAACTTAGTATAATTAGATAAATTTAATTATGATTATGTAAAATA
GTAAAAAATACTTTCTCTAAATGTAATAACGCTTTACTAATTACATTACA
AGTTTTTCTAAGTCAACTCCGACCATCTAAAGAAAATGACCTTGTATTTG
GTTAATAGACTTGGTGAGGCAGAGTTTCACCGGCAATCTCAATCTTTTAA
ATTGTAAATGAGTATTAAAAGGAATTTAAAAAAAATTTACAGTTTATATT
GTTAAAAAGATATGAATAAATACTTACTGTACAACCAAAGTAACTATCTT
CATTTTTTAAGACAGGAGTATGCAATTTTAACAGGTAGAGAGCTGCATTC
AGAAGTGGATTCTTTCCGAGGTTTATACAATAGTTGTATTAATCACAAGA
ATTATTTTAACCATTTATTCAAATAAACAAGTAACTAAAATACAAAAATT
AATGAGATTTTTACATTTGTTATAATCATTAACCAACTTGTCAATATAGT
GCTGAAGTTGGTGTTCAGATTTTTGAATCCGATTGAAGATTTGAGTTTGC
TATCATGTTTATTTTGAGCAAATGTACAATGAAACATTTTTCTTCTTCAA
TTTTGAGCCTTTTAATTATATTTGAGATAACTAATGATATGACGATGTTA
TTTTATAGTCCAAAGTTCATTAAACAATTATTCAATTATTACATTTAAAG
GTGGCATCAAACCCATGACTTTTAATCATATCTAAAATTACAAATTTTTT
GTTATGTGTTTCTATATTTTAACTAAGTAAATGTAATGATTCTAAGAATG
AACCCCAAGAAGCTTGAGCCATTGTGATTTATTTATAACTGTAAGTACAC
TTTATTACTAATTCACATAACATCCTGGATTATATATACATATACAGGTT
GACCAATAAGTTTGGTRATAATTTAMCAGCCAATACATTCCAAAATAATT
TATTTCTCGGAACATCTTTTTACACCATTGCAATCAGCGTGAAATTTCCT
TTAAAATAAGTTCAGGTCATTCCACATGGTCACTATTTGCGGCAACTATA
GCTCACAGACGCTTCAAAGCTGGTTTACACGCTGTACAGATGGTCTCCTC
GGACAAGTTGTCCCGTGAGTACCCAATGGCGGCCTCCAAGTTGTCGATGC
TGCTGTAGGAAATCACATTAATCTCCTTCTCTAGAATGAACTATATTATG
GAGAATTCTATAACGTTTATGACTTGGGAAGAAGGGTACAACATAATCTT
GCTCCAAAAGTACTTGAAAGTTTTTGGCAATACCCTTGCACATACTTTAC
ATTATTTGAATGTACTCCGTCCTGATGGAAGCTGTATAACCCTGCCCAGT
GATGTTCCTTGATCCAGAGAAGTATTTGGGGGATGTAACATGTCCAGATA
GACAAGTTGATTCCCCTTTACGCCCTGGATAATAAAGATCAAAGGCGTCT
TCATTCTGCAGGTGGTGACACCCCACCAAGACCATCTCTGAAGCCGATTT
TTGTCCCTGAATACACTGCACTCGTTCAAGGGAATGTCAAAAAGCTCCGA
CCCAGTACTAAGTTGCTGTGGTTATTGTAAATTTCTATGAATTTAAGTAA
TATGAGAGGGTGAATCTTTGGTGATGTAAGTTAACAAACACGTTCTTTAT
TCCTCTTGTTGAATTCGTTAAATTATCGATAAATTACCTTTATCAATATC
TTAAACTAAATATAATAGGCCGCCTAAATAACACTCAAAGGCTAATCCAT
CCTTAATTAGATGTCTGATACAGAGGAGGAGAAACCCCACTGTCTTTATC
CTCGATCTTTGCAACATCTCAAATCATATTATATCGAAAAATAACGATTC
CCCCTACGACCAAAAAAGTTCTTGAGGTCATTCAATTTCATATATACGGA
AATCCTCCTTATAGTCCTTATTTAAACTACAAATAAATTATTTAGACACC
AGTACTTCAAAGAAGAATGTTTTCCTGAATTACGACGTAGTTGAAGTAAC
CATCAATAACCTTGGAGTMCCTGTCTATCCATATAAGTACTGAATTTGAA
CCCAGTCGTTTTAATTGTAGGCACAAAAACACCTGTTAATATCCTATAAA
AATTATCAAATCTAACTCTTCTCATGGACTACGAGCCAAAGTCATCAGGA
TTTAAATTTAATATCGATGTAATAGGCTTACAGTCTTCTTTTGTAAAAAT
GACAAGTCGCTCATTCAAAATCCAAGCTCTACTATACATTTACAAATCAT
CAGAGGCCAAATTAGTTTCAAAATTTAATCTCTTTACTGAAAAAGTATCC
GTGATTGGACCTGTGAGATCAATGACAATGTCAAATAAAAATTTAGAAAT
GATCCATTTATATAAAAATCCATTTATATTTCTTTGGCAAAGTATTCTTT
TCTCTTTGTATTATTCCTTAATATAAAATATTAAGAGTTCATTGTTATCC
TTCAACATCAACTCTATATCTTCCTACGCTAGAGCCTCTAAGGCTCTCAA
TTATTTGAGGATAATTGGTTTTCCTGACGTAGTAGGTCTTGTGGACACTT
GCCTGAAGGATTTCAATTAAGTTGCCTACTTTTTCCCCTTATCATATTGG
TTATACTCTGTTCATTCTACTTTCAAATTATCACAACCCGCCAGAGAAGG
TTCTCTTGAGATGAAGAAAAATCTATATCCCAAACTAATTTAGTCTGTCA
CAGAAGGCAGAGATCGAAATAAGTTTTTTGCTAGGCAAAACATGGAAATA
ACATCTTAGGAATCATCCAAGAGTACAAAACTAAAAGTAGGGATGTTTGT
CTTTTGTGATCATTAAGGGTAACATTTTGTCCATGGTTTTTGTGTTAAGG
GATCAATTGACATCACAATGAAATAGGTAAAAGTAGTTTGTCATCCWCCT
ATTGCTCTTCGTTTTAAACTTACATTTCCCTGAGTTTCATTAATTATAGG
TGAGGCAAAATGATGGCAAGACTTCACCTTGAGGGGTTGAAAATAGAGAG
TGAATTATTGCTGAAGGAGTGGACGCGGCTGKAGACTGAAACTTATATTT
GAAACTTTCAAATCCGAATGGTTGTATGTTTTTGCCCCTAAATTTCGATG
GAGGTTGTTTGTAGAACAACCTTTAATAAATAACATGGGATTGCAAATTG
TGCAAACAGAAGAAGTGACTGAAAAGGCATTAAATTTGGGGCATATTGCA
CTTTTTTTCCACAAGAGATGGATTTATAATACACTTAAGTCAAGTCGAAA
TATTCTAATAACTAATGAAGAATGATTTAGGTACATTTTACTTAATATAT
AACTATTTTATAAGAAAAAAACACTTTAAAGGAAGATATGCTTAATCTTT
TATAAGATTATTTACTCGTTCAAAAAAGTAATTGTCTACTCAGCTCTGAG
TTTACTTAATTTGATTATTTTCAGGTAAAAGTGCTATTCCATCTAAAAAT
TATGAAATTTAGATATTTCAAGGGCTATGCGCTATCTCAAAATATGGAAA
ATAACTCTTTTTAAAAACAAAAACACATTTGAGAACCAGTCTTATACAAA
ACTGTTGCTTAAAATTGTCAGGCATCCATTCTTTCATTATTTATGCGAAA
TAATATGAATACATTCTAATGATAATTATTTATATTTTCATAATTCTATA
ATATTGATCCGCACAATTACTAAGCTGAATCTCTAAACAACTCACAAATC
CATTCTATAATGAAAATTATACATATATCTGATTTAAAATAAGTTAATTA
ATACCATTGTCAATTTCAGACAATGTTAGAGCATCGAGTTCCAAAAAGAA
AGAATACTCAAGACAGAAAATCTAGAATAAATCGAATGGTGTTACTAATG
GTTCTATGTTTTCAAGTCTGTTGGTTTCCATATGCTTTCGTTTCAATGTA
CAGAGTATTTATAGGAGATGTTCCAGTTATTTATACAGTGTTTCCAGTCC
AATTTGCAAAGTCTGGAGTATGTTGGAATCCATTTATTTATATAATAATG
AACAAGGAGGTATTATATTTTTTCGTATCTCTTTTTTCAAATCTTACTTA
TATAAATGTAATTGTTATAGTTTAAAAAAGAAATGGTTCTTGATCAAATT
GGAATACCCATGCAAAAGACGTTCCCCAATGCTAGTGATCCAACAATGAA
TGAAAATATGGAATCGCAACAAAGCATAGAACTGTAA

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