EMLSAG00000003329, EMLSAG00000003329-686095 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003329
Unique NameEMLSAG00000003329-686095
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003329 vs. L. salmonis peptides
Match: EMLSAP00000003329 (pep:novel supercontig:LSalAtl2s:LSalAtl2s182:500711:503774:1 gene:EMLSAG00000003329 transcript:EMLSAT00000003329 description:"maker-LSalAtl2s182-snap-gene-5.35")

HSP 1 Score: 227.639 bits (579), Expect = 7.046e-78
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 
Query:    1 MLITLVLISFLGPFVSSEYVIKSTEHGFIQNEKQNTSDVNIPTLMMNISTTTTQIPITTSRIVIEHEKVDYGDNFVRTEENERYNYFNVPDEERGNRIWGDPNFTNKHRSN 111
            MLITLVLISFLGPFVSSEYVIKSTEHGFIQNEKQNTSDVNIPTLMMNISTTTTQIPITTSRIVIEHEKVDYGDNFVRTEENERYNYFNVPDEERGNRIWGDPNFTNKHRSN
Sbjct:    1 MLITLVLISFLGPFVSSEYVIKSTEHGFIQNEKQNTSDVNIPTLMMNISTTTTQIPITTSRIVIEHEKVDYGDNFVRTEENERYNYFNVPDEERGNRIWGDPNFTNKHRSN 111
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003329 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003329 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003329 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000033297.046e-78100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s182:50071... [more]
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BLAST of EMLSAG00000003329 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003329 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003329 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003329 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s182supercontigLSalAtl2s182:500711..503774 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s182-snap-gene-5.35
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003329 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003329EMLSAT00000003329-699176Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s182:500711..503774+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003329-686095 ID=EMLSAG00000003329-686095|Name=EMLSAG00000003329|organism=Lepeophtheirus salmonis|type=gene|length=3064bp|location=Sequence derived from alignment at LSalAtl2s182:500711..503774+ (Lepeophtheirus salmonis)
GGAATCACTCTTGAACGCTACCAAGAGCTTTATGCTCAATTCATTGGTAA
CGCTGATGAAGCTTGCAACGCCTGCCACCTTTTCGGTCCTCTTGAAGTTC
TTTAAATGAATCTTTAAAAATTCTTCTTGTTTTTTTCTTTTTTTTTTTGA
AAACACAATTTATCAAAAAGTGGTAGGAAACGAAAAAACCCGAATTTATA
ACGCCCGCCCCCCCCCCCCCCGAAAAAAACCAAAAAACTTTATTGTAATA
ATAATTTGTTTTGATTCTTTAACTTGAATTATCTTTTTTTTTATTTATCT
TCAAAAATATCATATATAGAGAAAATAATACGGAATTACTGAGCGACGTT
ATTTTATCAATAGTTTTTAAGGCATATGTAATATAACAATTACTTGTGTA
GATATAAGAAACATTATAGATAGTGGATTTTTTTCTTAAAAAGTATATTA
TTGTTAATGTAATATAAAACATGAATATAACACGAGTTTGAATTTATATT
TCAAAAAATCATAATTCTGAGCTGTTATTCTTCTAGTAATATCATACTCA
TTCACCTTGACGATCAAGTTTTCTTAAGGACACATACCATAGGTAGAAAT
CCTTTCTTACCTGGGATATCCTTTTTTAGTTCATTTAAAATGTTGATCAC
ATTAGTATTAATATCTTTTCTTGGACCCTTTGTTTCATCTGAGTATGTGA
TTAAAAGTACAGAGCATGGATTTATTCAGAATGAAAAACAGGTTGGATAT
TTTATTTAATAATATGGGGAACTAATTACCATCAGCTTAATTTCAATATA
TTATGCGACTTAACTTCATCCTCAGAATACATCAGACGTCAATATTCCTA
CTCTCATGATGAATATCTCAACAACTACAACCCAAATCCCTATTACAACC
TCCAGAATTGTTATTGAACACGAGAAAGTGGACTATGGGGACAATTTTGT
TCGAACAGAAGAAAATGAGAGATACAACTATTTTAATGTTCCGGTAAAAA
GACAAATGTGTTTAAACCAGAGATTGACAATCTTTTTCATACAATAGCAT
AATTTAATAGCACACAAGCTAAAATGCCCCTTAAAATCTTTATCTAGATC
TATACATAAAAAGTACAGTAATACTTTATGATACGAGTGCCCCCAAGGGA
CGAGCTAGAATCCAATATAAAAATTTACTTTGACGTCGGAGGATTTTCTT
AGATACGAGCTGATCAAGAGTTGGCGATGGGGCGCAAGAACCGCTTTAAG
TGCAAATTTTTTTTTTATTTCTTAATTGCTTTGGCTCACGAGTTTTTCAC
TCGTTTATAGGCATAATTAACGTAGCTGTAATGCACCACTCCTAATCAAG
CAATGGGCTACAGGTTGTTAAGCATACTCCTGACTTAAACTCTCAAAATG
ATATCCTTACTAACAAATGAAACTATACATCAACAAAATGTTGAACCGAT
CAGTTATGATGTTGTTGTTTTTTTAATATTATTCATAAACCTCTTAGCAC
GTTGATTGCGATGCATCTTTTTATGCCATTGGTAGCTGACAAAAATTTAA
ACCTGCGTCTTTGAACTTAATTTGATATTTTAGGCATTTTTAGTTAGGGG
GGGGGGGGGGTTGGTGCCACATACGGTGCACATCTCGATCAATGTGTGAT
AAGTCTATAAATCACATTGAACATAATTAGTATATGCACCAGATACATAT
TCCTCAAATCTAGTATTCGCCGAACAGTGTTTATTAAATTTAAGGAAATA
GTAAATTATTTATGGAATAATTCAATTGCTTTTATTATAAATTTCCAGTT
GATTAATTATAATTAGTTATTAGTCGTACAAAATGATAATACACCATTAT
GTTAATTTAAGGATGAAGAAAGAGGCAACAGAATATGGGGAGATCCGAAC
TTTACAAACAAGCATAGAAGCAATTAGGAACGACTCAGACAACCTATTTA
ATTACTCAATCATATCAAATAATTATATGTTTGTATTTAAATGAGAAAAA
TAACTATTACATTCATTAAATAATATTTAACTTCGTTGCAATGACAATTC
TTATTTTTTTATCAAATGCTGTACAAACTGCAAGACCAAGTTTGTCTTTG
GACCAATCCAGAGCATTCACAGGCTGATCAGATATAGTCGTTTCTTGAAG
TTCCACAATGGTTCCAGGAACTCCTTGAGGAACATTATTATTGTCTAAGT
CAGAGCGCTTATCTGGATATTGATACTGGTAGAGTCCTAAACTTCCGGAA
CCAGATATGACTCCAAATATGTCTCTATTTTGTGGAAGATGTCTTACACC
CCACAAAGTTGTATGATTAGATCCAGTAAATTTCTCAAAGGTTTGTGCAT
AACCCTTCTTTGGATGAAGAGTTCGTAGATCAAAAGCATGAATTTTTCCT
TGAAGGCACGTAGCAATAAGTTTATTTGCTGGCTCTGTTTCAGAACGATC
AAATTCAACAGAACAAACTCCATTATTTAAGTGAGGCTCCGAGAGAACAC
TCATAGCTATTAAAAGTTATTATTTTTATGATATTATATGAATAAACAAC
GTATCATTAATAAGAAATATKCCTTTCAGATCGAATATTTTTATGTCGCC
ATTATCGTAGCCAGCAGCAATGAGGGATCCATCTTGTCCAAAAGAGGCAG
TCCAACAATCTCTTTTATACTCAGTTTCTCTGGGAATCATAKCAGCCACT
GGCTTTTCACGCACTCTAACATCCCAAACCTTAACACTTCCATCTCTCGA
AGCAGTTAGAATTTCTCCTGATCTCTGAGATCCATCAATTGAATTGATAA
GATCGGAATGGGCAGACTTAAAAGAATCTTTCGGCGTAGAGAGATTTTCC
AAATCCCAAATGTGAATGTTTCCTAGATATAATAAATTTAATAGAATAAG
AATGTGATGCTTGTTATTAATTAAATATAGGTAATTATAAATCATGTACC
TTTAAAATCCCCTGTTGTTAGATTTCTGTTACTGAGATCTGAAGATTTGA
ATGTTCCACATTTATAAGAAAAGGTGTCATCCCCGTCATTCTTGGAAGAG
AGCTTCAATTCCCT
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