EMLSAG00000003722, EMLSAG00000003722-686488 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592839509|gb|GAXK01118035.1| (TSA: Calanus finmarchicus comp125090_c0_seq2 transcribed RNA sequence) HSP 1 Score: 125.176 bits (313), Expect = 6.789e-33 Identity = 69/189 (36.51%), Postives = 107/189 (56.61%), Query Frame = 0 Query: 1 MNVIYKVIQEQFKNAEXXDGNYPSSPSNTVLGALTXXXX----XXXXXXXXXXMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIIL--------------------LNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWG 165 M+ I+ V+ ++ + + SSP T+LG+L K + + EM +H + + + PH IE++PFRRQD+R LNA+K+R +D+KLI+ L DYK + +V+GPVL G + ++ S+EVC+RL R KRE DP++D + N H +KHW+ P++IPFGWG Sbjct: 40 MSFIHHVLAKKKREEKIEKAEEDSSPVRTILGSLAGDKSPHPSRKSSMATTREMVSHTRRKEDRRPHRIEEVPFRRQDQRTLNAKKRRDMDKKLILFIVSCGFFLIFLGSILLVFYSLYQADYKDIRPAIVIGPVLLAGGVMTLLCSVEVCLRLYRETKRETDPDLDNLTNPHEVKHWMDPKIIPFGWG 606
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592839510|gb|GAXK01118034.1| (TSA: Calanus finmarchicus comp125090_c0_seq1 transcribed RNA sequence) HSP 1 Score: 125.561 bits (314), Expect = 1.663e-32 Identity = 69/189 (36.51%), Postives = 107/189 (56.61%), Query Frame = 0 Query: 1 MNVIYKVIQEQFKNAEXXDGNYPSSPSNTVLGALTXXXX----XXXXXXXXXXMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIIL--------------------LNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWG 165 M+ I+ V+ ++ + + SSP T+LG+L K + + EM +H + + + PH IE++PFRRQD+R LNA+K+R +D+KLI+ L DYK + +V+GPVL G + ++ S+EVC+RL R KRE DP++D + N H +KHW+ P++IPFGWG Sbjct: 40 MSFIHHVLAKKKREEKIEKAEEDSSPVRTILGSLAGDKSPHPSRKSSMATTREMVSHTRRKEDRRPHRIEEVPFRRQDQRTLNAKKRRDMDKKLILFIVSCGFFLIFLGSILLVFYSLYQADYKDIRPAIVIGPVLLAGGVMTLLCSVEVCLRLYRETKRETDPDLDNLTNPHEVKHWMDPKIIPFGWG 606
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592898364|gb|GAXK01060011.1| (TSA: Calanus finmarchicus comp756233_c0_seq1 transcribed RNA sequence) HSP 1 Score: 124.405 bits (311), Expect = 2.017e-32 Identity = 67/173 (38.73%), Postives = 98/173 (56.65%), Query Frame = 0 Query: 13 KNAEXXDGNYPSSPSNTVLGALTXXXXXXXXXXXXXXMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVM--------------------DYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWG 165 + E N SSP TVLG+L + + S+ + + K P IE++PFRRQD+RILNAR +R++DRKLI+ L + + +V+GPVL GF+ +MFS+E+CVRL R+ KR +DP++D + N H +KHW+ P+LIP+GWG Sbjct: 373 RRKESDSLNPDSSPVKTVLGSLNTVTHTMMVTNKN---SSDSNSLASKRPKTIEEVPFRRQDRRILNARNRRMMDRKLILFLVSCGLLLLLSGFCLLLLYVLYQQENHYIRPVIVVGPVLIGAGFMTIMFSVEICVRLYRAKKRVQDPDLDNLINPHEVKHWMDPKLIPYGWG 882
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592877033|gb|GAXK01080678.1| (TSA: Calanus finmarchicus comp381243_c0_seq2 transcribed RNA sequence) HSP 1 Score: 121.709 bits (304), Expect = 3.979e-31 Identity = 70/188 (37.23%), Postives = 105/188 (55.85%), Query Frame = 0 Query: 1 MNVIYKVIQEQFKNAEXXDG-NYPSSPSNTVLGALTXXXXXXXXXXXXXXMSTH--NKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIIL--------------------LNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWG 165 M+++++ + E G + +SP TVLG+L +I TH + K P IED+PFRRQD+RILNAR +R++D+KLII L ++K + F+V+GPVL G + ++ S+EVCVRL ++ KR +DPE+D + N H +KHW+ P++IPFGWG Sbjct: 60 MSMLHQARARRKAGQEAEAGQDVETSPVKTVLGSLAVNTIHTTVTN-----KTHVDKDDLASKKPVRIEDVPFRRQDRRILNARYRRLMDKKLIIFIVSVGFLLICIGSVFIGLYSLYQEEFKHMRPFIVIGPVLIGGGLITLLCSVEVCVRLYKAKKRVQDPELDNLINPHEVKHWMDPKIIPFGWG 608
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592839507|gb|GAXK01118037.1| (TSA: Calanus finmarchicus comp125090_c0_seq4 transcribed RNA sequence) HSP 1 Score: 116.701 bits (291), Expect = 1.014e-30 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 0 Query: 60 KIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVM--------------------DYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWG 165 KIP IE++PFRRQD+R LNAR +R++D KLII + + ++K + +V+GPVL G V ++ S+EVCVRL RS KR +DP++D ++N H +KHWV P +IP+GWG Sbjct: 48 KIPTRIEEVPFRRQDRRTLNARNRRLMDAKLIIFIVMTGLGLVGLGSGMLVVYIFYQEEFKHIRPVIVIGPVLIGGGVVTILCSVEVCVRLYRSKKRVQDPDLDSLDNPHEVKHWVEPAIIPYGWG 425
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592839508|gb|GAXK01118036.1| (TSA: Calanus finmarchicus comp125090_c0_seq3 transcribed RNA sequence) HSP 1 Score: 115.546 bits (288), Expect = 7.600e-30 Identity = 59/135 (43.70%), Postives = 85/135 (62.96%), Query Frame = 0 Query: 60 KIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVM--------------------DYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGW---GHRDSII 171 KIP IE++PFRRQD+R LNAR +R++D KLII + + ++K + +V+GPVL G V ++ S+EVCVRL RS KR +DP++D ++N H +KHW+ P++IPFGW G +D II Sbjct: 48 KIPTRIEEVPFRRQDRRTLNARNRRLMDAKLIIFIVMTGLGLVGLGSGMLVVYIFYQEEFKHIRPVIVIGPVLIGGGVVTILCSVEVCVRLYRSKKRVQDPDLDSLDNPHEVKHWMDPKIIPFGWGLFGEQDEII 452
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592877034|gb|GAXK01080677.1| (TSA: Calanus finmarchicus comp381243_c0_seq1 transcribed RNA sequence) HSP 1 Score: 117.857 bits (294), Expect = 8.956e-30 Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 0 Query: 62 PHHIEDIPFRRQDKRILNARKKRIVDRKLIIL--------------------LNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWG 165 P IEDIP+RRQD+RILNAR +R++D+KLII L ++K + F+V+GPVL G + ++ S+EVCVRL ++ KR +DPE+D + N H +KHW+ P++IPFGWG Sbjct: 288 PTRIEDIPWRRQDRRILNARYRRLMDKKLIIFIVSVGFLLICIGSVFIGLYSLYQEEFKHMRPFIVIGPVLIGGGLITLLCSVEVCVRLYKAKKRVQDPELDNLINPHEVKHWMDPKIIPFGWG 659
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592872446|gb|GAXK01085116.1| (TSA: Calanus finmarchicus comp4034326_c0_seq1 transcribed RNA sequence) HSP 1 Score: 97.8265 bits (242), Expect = 1.021e-23 Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 19 DGNYPSSPSNTVLGALTXXXXXXXXXXXXXXMSTHNK------GIKIK--------IPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVMD--------------------YKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPE 158 D ++ SP TVLG+L + S++ + + N G K K IP IE++PFRRQD+R LNA+ +R +DRKLII + YK + +V+GPVL G + +M S+EVC RL + KRE+DP++D ++N H IKHW+ P+ Sbjct: 2 DKDHELSPVKTVLGSLVTDNTSQQEMKVVDRKTDKNTQGGTAGGFKKKFYSRTKHRIPVRIEEVPFRRQDRRTLNAKIRREMDRKLIIFICSCGMLLILLGSVLLVLNSFYSDHYKHIRPAIVIGPVLLAGGVMTIMCSLEVCFRLYKETKREQDPDLDNLKNPHEIKHWMDPK 523
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592813524|gb|GAXK01141044.1| (TSA: Calanus finmarchicus comp4727043_c0_seq1 transcribed RNA sequence) HSP 1 Score: 89.3521 bits (220), Expect = 2.186e-20 Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 0 Query: 61 IPHHIEDIPFRRQDKRILNARKKRIVDRKLIIL--------------------LNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWGH 166 +P +E+ P RR D+R LNA +KR DR +I + D+ F++LGP+L G V++ S+E+ +RL + IKR DP + + +N H +KHWV PELI FGWG Sbjct: 7 VPTTLEEAPLRRMDRRALNALRKRRADRHMIAFLVLSGILLILLGLAAVGSWKMFRQDHHYVGPFIILGPILGLTGVVLVASSMELIIRLRKQIKRVMDPNLLKTDNFHEVKHWVEPELIYFGWGQ 384
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Match: gi|592750087|gb|GAXK01204326.1| (TSA: Calanus finmarchicus comp1894311_c0_seq1 transcribed RNA sequence) HSP 1 Score: 88.9669 bits (219), Expect = 4.698e-20 Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 0 Query: 61 IPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVM--------------------DYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWGHRDSIIESSFNEGEEL 181 +P +E+ P RR D+R LNA +KR DR +I L + D + ++LGP+L G +++ S+E+ +RL + IKR DP + + N H +KHWV PELI FGWG D E+ + +L Sbjct: 179 VPTTLEEAPLRRMDRRALNALRKRRADRHMIAFLIIAGIILMILGAGAIVTWVMYRSDTRHVGPLIILGPILVLAGVGLVVCSLELVMRLRKQIKRVMDPNLLKTNNFHEVKHWVEPELISFGWGQFDMDEEAKLLDQNQL 601
BLAST of EMLSAG00000003722 vs. L. salmonis peptides
Match: EMLSAP00000003722 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1:354157:366452:-1 gene:EMLSAG00000003722 transcript:EMLSAT00000003722 description:"augustus_masked-LSalAtl2s1-processed-gene-3.5") HSP 1 Score: 493.426 bits (1269), Expect = 3.069e-178 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MNVIYKVIQEQFKNAEXXDGNYPSSPSNTVLGALTPKSISKEPIISKIEMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWGHRDSIIESSFNEGEELGYTFKPKECSLSKAIVEISTDNKPVCHSGINPPELTIVPSSPAQDSRVNLEESSSSLLKKKPXPIAAV 249 MNVIYKVIQEQFKNAEXXDGNYPSSPSNTVLGALTPKSISKEPIISKIEMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWGHRDSIIESSFNEGEELGYTFKPKECSLSKAIVEISTDNKPVCHSGINPPELTIVPSSPAQDSRVNLEESSSSLLKKKPXPIAAV Sbjct: 1 MNVIYKVIQEQFKNAEXXDGNYPSSPSNTVLGALTPKSISKEPIISKIEMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVMDYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWGHRDSIIESSFNEGEELGYTFKPKECSLSKAIVEISTDNKPVCHSGINPPELTIVPSSPAQDSRVNLEESSSSLLKKKPXPIAAV 249
BLAST of EMLSAG00000003722 vs. L. salmonis peptides
Match: EMLSAP00000002421 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:843963:845296:-1 gene:EMLSAG00000002421 transcript:EMLSAT00000002421 description:"maker-LSalAtl2s145-augustus-gene-9.6") HSP 1 Score: 192.2 bits (487), Expect = 5.739e-61 Identity = 100/177 (56.50%), Postives = 127/177 (71.75%), Query Frame = 0 Query: 3 VIYKVIQEQFKNAEXXD--GNYPSSPSNTVLGALTPKSISKEPIISKIEMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLIILLNVM--------------------DYKRTKIFLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHP 157 ++YK Q++ + + D + SSP+ T+LGALTP+S+S++PII K M TH + K IP HIE+IPFRRQDKRIL ARKKR+VDRKLIILLN + + KRT+IF+VLGPVLA +G VVMMFSIEVC+RL R+ KREKDPEID++EN+HHIKHW+HP Sbjct: 1 MMYKAFQDRVGDDQNLDIHNKFTSSPTKTILGALTPRSVSRDPIIPKKNM-THIQTYKTSIPEHIEEIPFRRQDKRILYARKKRVVDRKLIILLNAIGLFILIMGLVFFVLYFVFNRENKRTRIFVVLGPVLAVIGIVVMMFSIEVCMRLWRNKKREKDPEIDDVENIHHIKHWIHP 176
BLAST of EMLSAG00000003722 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold541_size141817-snap-gene-0.26 (protein:Tk05600 transcript:maker-scaffold541_size141817-snap-gene-0.26-mRNA-1 annotation:"membrane protein") HSP 1 Score: 125.561 bits (314), Expect = 1.073e-34 Identity = 68/187 (36.36%), Postives = 110/187 (58.82%), Query Frame = 0 Query: 1 MNVIYKVIQEQF-KNAEXXDGNYPSSPSNTVLGALTPKSISKEPIISKIEMSTHNKGIKIKIPHHIEDIPFRRQDKRILNARKKRIVDRKLI----------ILLNV------MDYKRTKI----FLVLGPVLAXLGFVVMMFSIEVCVRLIRSIKREKDPEIDEIENVHHIKHWVHPELIPFGWGH 166 M+++ + + +F K + + SP TV+GALTP+ +PI + S + P IED+PFRRQD+RI+NARK+R +DR+LI +L V YK + F+++G + G ++++ +IEVC++L +++KR +DPEID ++++H IKHW+ PELIP+GWG Sbjct: 1 MSLVQALARAKFMKRNDDRENEGRGSPVKTVMGALTPRPKFPDPIRGGKKSSK----LTPVAPTKIEDVPFRRQDRRIVNARKRRTMDRQLIKCLCFFGIVAVLAGVAFIVMWFQYKEQERLVDPFVIIGTCVVIFGLILILCTIEVCIKLQKNVKRVRDPEIDNVKSLHLIKHWIQPELIPYGWGQ 183 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003722 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000003722 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 13
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BLAST of EMLSAG00000003722 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000003722 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000003722 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000003722 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000003722 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1:354157..366452- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003722-686488 ID=EMLSAG00000003722-686488|Name=EMLSAG00000003722|organism=Lepeophtheirus salmonis|type=gene|length=12296bp|location=Sequence derived from alignment at LSalAtl2s1:354157..366452- (Lepeophtheirus salmonis)back to top Add to Basket
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