EMLSAG00000003871, EMLSAG00000003871-686637 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003871
Unique NameEMLSAG00000003871-686637
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592833102|gb|GAXK01124442.1| (TSA: Calanus finmarchicus comp24536_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 98.5969 bits (244), Expect = 1.001e-23
Identity = 69/162 (42.59%), Postives = 108/162 (66.67%), Query Frame = 0 
Query:   15 VISSVYGFDPVTLTVGTXAYXXXXXXXXXXXXXXXXXXXXKEKLIISALS-NRGKRDVSA-VQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQ-LCKERYATCTVPSKELLKVVE 173
            +++    F  +TL +   +YVLTA+QTTL +A+LAGLA+AKE LI++ALS +RGKR V    ++  +   N FF  + ++DV+DCGKLLVCE+M+    +L ++E+ I NLFD+       S  +EYQ AAY+G+L Q + +C  RY+ C + ++E++ +V 
Sbjct:  118 ILTPAEAFGSLTLLLAGTSYVLTASQTTLAIASLAGLAVAKEALILAALSRSRGKRSVDEDAEKVSSAQFNDFFDVIAKSDVADCGKLLVCELMS--RVDLDQDEKRIVNLFDDLEHIDPSSGRSEYQLAAYLGSLNQTEAICVRRYSKCPMSTEEVMDIVR 597
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BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592854055|gb|GAXK01103489.1| (TSA: Calanus finmarchicus comp61937_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 62.003 bits (149), Expect = 1.133e-10
Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 0 
Query:   66 RGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQL-CKERYATCTVPSKELLK 170
            R KR  SA   A   D ++ F  V   D+  CGK LVCE+ A   SE   E+ L+ +LF         SA  EY  AA +G   + Q+ C++RY+TC   + E+++
Sbjct:  307 RQKRAASA---ALGPDPDSLFQLVSSMDLYSCGKQLVCELEAKADSERTPEDMLMISLFGKGKSVNPASAKAEYDLAAELGMASKSQIVCRKRYSTCPYTADEMME 615
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BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592935479|gb|GAXK01023074.1| (TSA: Calanus finmarchicus comp114460_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 53.5286 bits (127), Expect = 6.002e-8
Identity = 35/100 (35.00%), Postives = 47/100 (47.00%), Query Frame = 0 
Query:   66 RGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEG-KFTADSATNEYQFAAYVG-TLQQPQLCKERYATCTV 163
            RGKR+VS V+    +D    F  +   DV+DC K  VCE+ ATP   L  ++    ++F     K    SA  EY  A   G T +  + CK  Y  C V
Sbjct:  542 RGKREVSGVK----LDFEHVFQKISAMDVNDCAKRYVCEISATPRDHLSAQDISTLSMFGQHVLKSKTTSAKYEYDMAWARGNTAENAETCKNVYKKCPV 829
[Close]
BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592835767|gb|GAXK01121777.1| (TSA: Calanus finmarchicus comp107205_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 52.373 bits (124), Expect = 1.217e-7
Identity = 27/81 (33.33%), Postives = 41/81 (50.62%), Query Frame = 0 
Query:   93 DVSDCGKLLVCEV--MATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            D  DC K LVCE+  M +   EL   EE++AN F N G+      + E+  AA +G     + C+  Y  C  P  ++L++
Sbjct:   79 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRCETPVSQMLRM 321
[Close]
BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592835768|gb|GAXK01121776.1| (TSA: Calanus finmarchicus comp107205_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 51.9878 bits (123), Expect = 1.550e-7
Identity = 27/81 (33.33%), Postives = 41/81 (50.62%), Query Frame = 0 
Query:   93 DVSDCGKLLVCEV--MATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            D  DC K LVCE+  M +   EL   EE++AN F N G+      + E+  AA +G     + C+  Y  C  P  ++L++
Sbjct:  150 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRCETPVSQMLRM 392
[Close]
BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592858052|gb|GAXK01099510.1| (TSA: Calanus finmarchicus comp446632_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 51.6026 bits (122), Expect = 2.190e-7
Identity = 26/83 (31.33%), Postives = 44/83 (53.01%), Query Frame = 0 
Query:   93 DVSDCGKLLVCEV--MATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVE 173
            D  DC K LVCE+  M +    L + EE++AN F N G+      + E+  AA +G     + C+  Y  C  P +++L++++
Sbjct:  437 DQDDCSKRLVCELNAMRSNGQVLSQHEEVLANAFGNSGELDVGKNSLEFDIAAVLGREVGMRRCELSYRRCETPVQQMLRMID 685
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BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592774534|gb|GAXK01180034.1| (TSA: Calanus finmarchicus comp1833751_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 9.743e-7
Identity = 32/101 (31.68%), Postives = 51/101 (50.50%), Query Frame = 0 
Query:   66 RGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEG--KFTADSATNEYQFAAYVGTL-QQPQLCKERYATCTV 163
            RGKR+V    E+   D+   F  + + DV+DC K  VCE+ A  +  L R++     LF   G  K  ++ A  EY  A  +G + +  + C++RY  C +
Sbjct:  314 RGKREV----ESDTADIEQIFQEISELDVADCAKRYVCEISARQSQLLNRQDISTLGLF-KRGVLKNKSNFALMEYDKARTLGKVYKDTKKCRQRYDKCPI 601
[Close]
BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592926123|gb|GAXK01032308.1| (TSA: Calanus finmarchicus comp21077_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 3.219e-6
Identity = 30/119 (25.21%), Postives = 57/119 (47.90%), Query Frame = 0 
Query:   65 NRGKRDVSAVQE----AKNVDLNAF-----FWAVGQADVSDCGKLLVCEVMATPTS--ELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVV 172
            +RGKR    ++E     +++D N F     +  + + D   CGK L+CE+ +   S   +  +E+LIA  F +  +      T E+  AA +G       C + Y  C   +++++K++
Sbjct:  147 HRGKRSADQLEELHRMKRDIDENGFNMNDWYRDMTEMDQDSCGKKLICELRSKEASGVSMSADEKLIAEKFGSGKQVDVSDITVEFDLAAQIGLNMGEARCGQLYNRCDTSTEDMVKMI 503
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BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592774535|gb|GAXK01180033.1| (TSA: Calanus finmarchicus comp1833751_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 47.3654 bits (111), Expect = 4.513e-6
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:   66 RGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEG--KFTADSATNEYQFAAYVGTL-QQPQLCKERYATCTVPSKELL 169
            RGKR+V +       +L+  F  + + DV+DC K  VCE+ A  +  L R++     LF   G  K  ++ A  EY  A  +G + +  + C++RY  C + + + L
Sbjct:  315 RGKREVGS----DTANLDQIFQEISELDVADCAKRYVCEISARQSQLLNRQDISTLGLF-KRGVLKNKSNFALMEYDKARTLGKVYKDTKKCRQRYDKCPIQNLDSL 620
[Close]
BLAST of EMLSAG00000003871 vs. C. finmarchicus
Match: gi|592830700|gb|GAXK01126844.1| (TSA: Calanus finmarchicus comp47414_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 5.556e-4
Identity = 23/82 (28.05%), Postives = 38/82 (46.34%), Query Frame = 0 
Query:   93 DVSDCGKLLVCEVMATPTSE--LKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVV 172
            D  DC K L+CE+ A       L   E +IAN F    +    + T E+  AA +G     + C+  +  C  P  +++K++
Sbjct:   19 DQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKMI 264
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000003871 (pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516:891122:-1 gene:EMLSAG00000003871 transcript:EMLSAT00000003871 description:"maker-LSalAtl2s20-augustus-gene-8.8")

HSP 1 Score: 364.385 bits (934), Expect = 1.415e-129
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 
Query:    1 MKQFTVSALFLTATVISSVYGFDPVTLTVGTXAYVLTAAQTTLGVAALAGLAIAKEKLIISALSNRGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVEAHTGAQV 180
            MKQFTVSALFLTATVISSVYGFDPVTLTVGTXAYVLTAAQTTLGVAALAGLAIAKEKLIISALSNRGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVEAHTGAQV
Sbjct:    1 MKQFTVSALFLTATVISSVYGFDPVTLTVGTXAYVLTAAQTTLGVAALAGLAIAKEKLIISALSNRGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVEAHTGAQV 180
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000000512 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:493556:498566:1 gene:EMLSAG00000000512 transcript:EMLSAT00000000512 description:"maker-LSalAtl2s107-snap-gene-5.72")

HSP 1 Score: 64.3142 bits (155), Expect = 2.130e-13
Identity = 59/174 (33.91%), Postives = 80/174 (45.98%), Query Frame = 0 
Query:    8 ALFLTATVISSVYG-FDPVTLTVGTXAYVL----------TAAQTTLGVAALAGLAIAKEKLIISALSNRGKRDVSAVQEAKNVD-LNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVG-TLQQPQLCKERYATCTVPSKEL 168
            A    + +++SVYG FDP+++T                  T A   LG A L G A  K  +I S L NR  RD  A +    +  L+++F A+   DV DCGK  VCE+     S+   EE +IA LF  +      S   EY  AAY+G T +    C  RY  C V  K +
Sbjct:   13 AFVFASCMVASVYGIFDPISITGLATGGAAXALGTSTVFATPAGIALGAAGLLGAAAVKGAIIGSLLRNR--RD--AEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLF-GDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTI 181
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000012083 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1 gene:EMLSAG00000012083 transcript:EMLSAT00000012083 description:"maker-LSalAtl2s864-augustus-gene-0.14")

HSP 1 Score: 59.3066 bits (142), Expect = 1.258e-11
Identity = 37/114 (32.46%), Postives = 53/114 (46.49%), Query Frame = 0 
Query:   58 LIISALSNRGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            L+  A+  RGKR          +DL +   +  Q D SDC K LVCEV     +E++ E  +IA LF N        AT E+  AA +G     + C   Y  C    ++L+K+
Sbjct:   75 LVAGAIIGRGKRSA--------IDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALF-NADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKI 179
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000012084 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1 gene:EMLSAG00000012084 transcript:EMLSAT00000012084 description:"augustus_masked-LSalAtl2s864-processed-gene-0.1")

HSP 1 Score: 55.8398 bits (133), Expect = 2.305e-10
Identity = 32/89 (35.96%), Postives = 41/89 (46.07%), Query Frame = 0 
Query:   91 QADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVEAHTGAQ 179
            Q D SDC K LVCEV  TP     +EE +IA LF N         T E+  AA +G     + C   Y  C    K+L+++    T  Q
Sbjct:  101 QNDASDCAKRLVCEVNGTPLENFSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQ 188
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000007339 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gene:EMLSAG00000007339 transcript:EMLSAT00000007339 description:"snap_masked-LSalAtl2s414-processed-gene-0.6")

HSP 1 Score: 54.6842 bits (130), Expect = 8.441e-10
Identity = 33/105 (31.43%), Postives = 45/105 (42.86%), Query Frame = 0 
Query:   67 GKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            GKR +         D  +   +  Q D SDC K LVCEV      ++  EE +IA LF N        AT E+  AA +G     Q C   Y  C    ++L+ +
Sbjct:  113 GKRSID--------DFESVLLSASQHDASDCAKKLVCEVSGLTLEDINSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKHVGIQQCSIIYQRCPHSRRKLIDI 208
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000012085 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1 gene:EMLSAG00000012085 transcript:EMLSAT00000012085 description:"maker-LSalAtl2s864-augustus-gene-0.15")

HSP 1 Score: 53.5286 bits (127), Expect = 1.116e-9
Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0 
Query:   67 GKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            GKR   ++ E ++V L+A      Q D SDC K LVCEV      ++  EE +IA LF N        AT E+  AA +G     Q C   Y  C    ++L+ +
Sbjct:   72 GKR---SIDEFESVLLSA-----SQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDI 167
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000007336 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 gene:EMLSAG00000007336 transcript:EMLSAT00000007336 description:"maker-LSalAtl2s414-augustus-gene-0.14")

HSP 1 Score: 53.5286 bits (127), Expect = 4.299e-9
Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = 0 
Query:   66 RGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            RGKR   A+ E + + L+A      Q D +DC K LVCE+ + P + +  EE  IA+ F N        AT E++ AA +G     + C   Y  C  P  +L+++
Sbjct:   94 RGKR---AINEYEEILLSA-----SQEDQNDCAKRLVCEISSLPPTAMSLEEVQIASAF-NSNYLDISKATVEFELAAQIGKRVGLEQCSVIYKRCPFPRAKLMEI 190

HSP 2 Score: 51.9878 bits (123), Expect = 1.388e-8
Identity = 34/106 (32.08%), Postives = 54/106 (50.94%), Query Frame = 0 
Query:   66 RGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
            RGKR   A+ E + + L++      Q D +DC K LVCE+ + P + +  EE  IA++F N        AT E++ AA +G     + C   Y  C  P  +L+++
Sbjct:  293 RGKR---AINEYEEILLSS-----SQEDQNDCTKRLVCEISSLPPTAMSPEEIQIASVF-NSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPYPRAKLMEI 389
[Close]
BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Match: EMLSAP00000007148 (pep:novel supercontig:LSalAtl2s:LSalAtl2s402:845514:849311:1 gene:EMLSAG00000007148 transcript:EMLSAT00000007148 description:"maker-LSalAtl2s402-snap-gene-8.10")

HSP 1 Score: 48.9062 bits (115), Expect = 1.771e-7
Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 0 
Query:   67 GKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLF---DNEGKFTADSATNEYQFAAYVGTLQQPQ-LCKERYATCTVPSKELLKVVE 173
            GKR  + +  A   D  A F  V   DV  CGK L+CE+ A  ++EL+ +E L+ +LF   + + K+   S   EY  AA +G + + Q LC+ RY  C   ++EL+  + 
Sbjct:  348 GKR-XAELPRAIVPDPEAIFSLVASLDVHSCGKQLICELEAKNSTELEEDELLMLSLFGKNNKKMKYNPKSHKAEYDLAAELGLISKSQALCRSRYTDCPYTAEELMSALR 457
[Close]
BLAST of EMLSAG00000003871 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold197_size267318-snap-gene-1.35 (protein:Tk09461 transcript:maker-scaffold197_size267318-snap-gene-1.35-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 67.0106 bits (162), Expect = 4.182e-14
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 0 
Query:   68 KRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGK--FTADSATNEYQFAAYVGTLQQPQ-LCKERYATCTVPSKELLKVVE 173
            +R  SA   A N D  A F  +   D   CGK LVCE+ A    +L+ +E LI +LF ++ K      SA  EY+ AA +G + + Q +C++RY TC     E++K + 
Sbjct:  119 RRRRSADIAAPNPD--ALFALISSMDTHGCGKQLVCELEAKDARQLQGDESLILSLFGDKQKKGLNVASAKAEYELAAQLGQITKSQVMCRQRYTTCPYTGTEMMKALR 225
[Close]
BLAST of EMLSAG00000003871 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold39_size501901-snap-gene-2.7 (protein:Tk00983 transcript:maker-scaffold39_size501901-snap-gene-2.7-mRNA-1 annotation:"glutamate ionotropic kainate 2")

HSP 1 Score: 60.077 bits (144), Expect = 3.556e-11
Identity = 48/179 (26.82%), Postives = 74/179 (41.34%), Query Frame = 0 
Query:    2 KQFTVSALFLTATVISSVYGFD------PVTLTVGTXAYVLTAAQTTLGVAALAGLAIAKEKLIISALSNRGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVEA 174
            K F + AL + ++ ++    FD      PV L V     +  A    LGV   AG      +        R  R VS+++++        F      D  DC K+LVC + + P  +L  EEE+IA +F    +     ++ E+  AA VG       CK  YA C    K L+  + +
Sbjct:    3 KSFAIVALLVASSCLTEAI-FDGGIVSIPVGLAVAGIIGLKIAGGIGLGVGFAAGRGGRGGRGGRGGHGGRFGRSVSSIEDS--------FLQASLVDADDCAKMLVCLINSAPAEDLSEEEEIIAEMFGQNDEINVSKSSVEFDLAALVGRKAGASQCKSLYARCPHNQKYLIDTLRS 172
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003871 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003871 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 22
Match NameE-valueIdentityDescription
gi|592833102|gb|GAXK01124442.1|1.001e-2342.59TSA: Calanus finmarchicus comp24536_c0_seq1 transc... [more]
gi|592854055|gb|GAXK01103489.1|1.133e-1035.85TSA: Calanus finmarchicus comp61937_c0_seq1 transc... [more]
gi|592935479|gb|GAXK01023074.1|6.002e-835.00TSA: Calanus finmarchicus comp114460_c1_seq1 trans... [more]
gi|592835767|gb|GAXK01121777.1|1.217e-733.33TSA: Calanus finmarchicus comp107205_c3_seq2 trans... [more]
gi|592835768|gb|GAXK01121776.1|1.550e-733.33TSA: Calanus finmarchicus comp107205_c3_seq1 trans... [more]
gi|592858052|gb|GAXK01099510.1|2.190e-731.33TSA: Calanus finmarchicus comp446632_c0_seq1 trans... [more]
gi|592774534|gb|GAXK01180034.1|9.743e-731.68TSA: Calanus finmarchicus comp1833751_c0_seq2 tran... [more]
gi|592926123|gb|GAXK01032308.1|3.219e-625.21TSA: Calanus finmarchicus comp21077_c1_seq1 transc... [more]
gi|592774535|gb|GAXK01180033.1|4.513e-629.91TSA: Calanus finmarchicus comp1833751_c0_seq1 tran... [more]
gi|592830700|gb|GAXK01126844.1|5.556e-428.05TSA: Calanus finmarchicus comp47414_c0_seq3 transc... [more]

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BLAST of EMLSAG00000003871 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 8
Match NameE-valueIdentityDescription
EMLSAP000000038711.415e-129100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516... [more]
EMLSAP000000005122.130e-1333.91pep:novel supercontig:LSalAtl2s:LSalAtl2s107:49355... [more]
EMLSAP000000120831.258e-1132.46pep:novel supercontig:LSalAtl2s:LSalAtl2s864:10512... [more]
EMLSAP000000120842.305e-1035.96pep:novel supercontig:LSalAtl2s:LSalAtl2s864:14109... [more]
EMLSAP000000073398.441e-1031.43pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:... [more]
EMLSAP000000120851.116e-934.29pep:novel supercontig:LSalAtl2s:LSalAtl2s864:16517... [more]
EMLSAP000000073364.299e-933.02pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152... [more]
EMLSAP000000071481.771e-734.23pep:novel supercontig:LSalAtl2s:LSalAtl2s402:84551... [more]
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BLAST of EMLSAG00000003871 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003871 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003871 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003871 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold197_size267318-snap-gene-1.354.182e-1435.78protein:Tk09461 transcript:maker-scaffold197_size2... [more]
maker-scaffold39_size501901-snap-gene-2.73.556e-1126.82protein:Tk00983 transcript:maker-scaffold39_size50... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s20supercontigLSalAtl2s20:890516..891122 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s20-augustus-gene-8.8
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003871 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003871EMLSAT00000003871-699718Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s20:890516..891122-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003871-686637 ID=EMLSAG00000003871-686637|Name=EMLSAG00000003871|organism=Lepeophtheirus salmonis|type=gene|length=607bp|location=Sequence derived from alignment at LSalAtl2s20:890516..891122- (Lepeophtheirus salmonis)
ATGAAGCAATTTACCGTCTCAGCTCTTTTCCTTACCGCTACTGTCATCTC
CAGCGTTTATGGATTTGATCCCGTTACCTTAACCGTTGGAACAKCTGCCT
ACGTCCTCACTGCTGCTCAAACCACTCTCGGAGTGGCTGCTCTCGCTGGT
TTGGCAATTGCAAAGGAAAAGCTTATAATTTCTGCCCTTAGGTAAGGCCT
GAGTCATTTCAAATATATTTCTTTCCAAATCTCGCATGACAAATCTCTTT
TTTAGCAACCGTGGAAAGCGAGACGTAAGTGCTGTTCAAGAAGCCAAGAA
CGTCGACTTGAACGCCTTTTTCTGGGCTGTTGGACAAGCTGATGTCTCAG
ACTGCGGAAAACTCCTTGTCTGTGAAGTCATGGCTACCCCTACATCTGAA
TTGAAAAGAGAAGAAGAGTTGATCGCCAATTTGTTTGACAATGAGGGCAA
ATTCACTGCTGATTCTGCCACCAATGAATATCAATTTGCTGCCTATGTTG
GAACCCTTCAACAACCCCAACTTTGTAAAGAAAGATATGCTACCTGCACT
GTCCCATCCAAGGAATTGCTCAAAGTTGTCGAAGCACACACTGGTGCTCA
AGTTTAA
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