EMLSAG00000004166, EMLSAG00000004166-686932 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592861941|gb|GAXK01095621.1| (TSA: Calanus finmarchicus comp201360_c1_seq1 transcribed RNA sequence) HSP 1 Score: 65.4698 bits (158), Expect = 7.378e-13 Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 50 FKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGK-IEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQ 125 F D G+ + E E D++P+++ G+ IEDMEAEF +ID N G QILF E WA KN DIED IDSQ Sbjct: 387 FSVVDTEGDHRISKEEFCNE--DLRPTIEKWTGEEIEDMEAEFAAIDENEGGQILFKEFCNWAFSKNFDIEDDIDSQ 611 HSP 2 Score: 37.7354 bits (86), Expect = 3.600e-3 Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = 0 Query: 41 EDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 E A+RR ++ + NGNKYL LAEVDK + D+ Sbjct: 120 EAHAQRREIWNSMNVNGNKYLSLAEVDKGIIDV 218
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592884998|gb|GAXK01073377.1| (TSA: Calanus finmarchicus comp148446_c0_seq2 transcribed RNA sequence) HSP 1 Score: 61.2326 bits (147), Expect = 2.082e-11 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 50 FKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYID 123 F + D + + E E+ IK +++ +G IE+ME EF+ ID N G QILF+E + WAL++NLDIED +D Sbjct: 334 FDRIDTGDDNRVSKEEFTSEV--IKETIERWVGPIENMEEEFNKIDKNGGGQILFSEFVDWALERNLDIEDDVD 549 HSP 2 Score: 35.039 bits (79), Expect = 3.647e-2 Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 0 Query: 41 EDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 E+K KR+ L++ D NGN Y+ LAE+ K + D+ Sbjct: 67 EEKEKRKQLWRGIDINGNGYVSLAEITKGIRDV 165
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592884999|gb|GAXK01073376.1| (TSA: Calanus finmarchicus comp148446_c0_seq1 transcribed RNA sequence) HSP 1 Score: 61.2326 bits (147), Expect = 2.559e-11 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 50 FKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYID 123 F + D + + E E+ IK +++ +G IE+ME EF+ ID N G QILF+E + WAL++NLDIED +D Sbjct: 334 FDRIDTGDDNRVSKEEFTSEV--IKETIERWVGPIENMEEEFNKIDKNGGGQILFSEFVDWALERNLDIEDDVD 549 HSP 2 Score: 35.039 bits (79), Expect = 3.707e-2 Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 0 Query: 41 EDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 E+K KR+ L++ D NGN Y+ LAE+ K + D+ Sbjct: 67 EEKEKRKQLWRGIDINGNGYVSLAEITKGIRDV 165
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592925126|gb|GAXK01033289.1| (TSA: Calanus finmarchicus comp82710_c0_seq1 transcribed RNA sequence) HSP 1 Score: 58.151 bits (139), Expect = 3.754e-10 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNL 116 +K +++ +G IED+EAEFDSID N G Q+LFNE I WAL K+L Sbjct: 174 LKSAMEKWVGPIEDLEAEFDSIDTNGGGQVLFNEFIDWALAKDL 305 HSP 2 Score: 32.7278 bits (73), Expect = 2.053e-1 Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 0 Query: 41 EDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +D + R+ L++ D NGN YL LAEV K + D+ Sbjct: 537 DDFSARKELWEAMDVNGNGYLSLAEVTKGVRDV 635
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592778918|gb|GAXK01175650.1| (TSA: Calanus finmarchicus comp2564_c0_seq1 transcribed RNA sequence) HSP 1 Score: 58.151 bits (139), Expect = 3.821e-10 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNL 116 I+ S++T +G I+DMEAEF ID N G QILF+E + WAL+KNL Sbjct: 205 IRESIETWVGPIDDMEAEFAKIDTNGGGQILFSEFVDWALEKNL 336
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592883943|gb|GAXK01074432.1| (TSA: Calanus finmarchicus comp501341_c0_seq1 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 2.224e-6 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0 Query: 76 SVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIE 119 +VK G DMEAEFD+ID + + F +L+ WALKKN+ IE Sbjct: 278 TVKKWTGDDLDMEAEFDAIDEDHQGHVFFEDLVKWALKKNMKIE 409
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592831435|gb|GAXK01126109.1| (TSA: Calanus finmarchicus comp3726270_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 3.546e-3 Identity = 12/47 (25.53%), Postives = 29/47 (61.70%), Query Frame = 0 Query: 71 PDIKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLD 117 PD++ ++ +G + + E+D ID + ++ F+ ++ WA K+++D Sbjct: 23 PDVQAEIRIYVGDVSNASEEYDVIDKDGVGEVRFDCIVNWAFKRSMD 163
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592753558|gb|GAXK01200855.1| (TSA: Calanus finmarchicus comp293997_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 3.542e-2 Identity = 21/49 (42.86%), Postives = 27/49 (55.10%), Query Frame = 0 Query: 74 KPSVKTRLGKIEDMEAEFDSIDANT--GD-QILFNELIIWALKKNLDIE 119 K ++ LG ED EFDSID GD +LF E WAL KN++ + Sbjct: 435 KKVLERWLGPREDWAEEFDSIDMTNKKGDGNVLFREFFDWALNKNIEFQ 581
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592886109|gb|GAXK01072266.1| (TSA: Calanus finmarchicus comp922209_c0_seq7 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 6.311e-2 Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0 Query: 48 ALFKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSI----DANTGDQIL 103 ALFKK+D N + + +E+DK + + S KT + K DM FDS+ DAN GD ++ Sbjct: 161 ALFKKYDLNSDGQIDQSEMDKIVAKMNASGKTTMAK--DMRERFDSMLTNFDAN-GDGMI 331
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Match: gi|592886112|gb|GAXK01072263.1| (TSA: Calanus finmarchicus comp922209_c0_seq4 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 8.786e-2 Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0 Query: 48 ALFKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSI----DANTGDQIL 103 ALFKK+D N + + +E+DK + + S KT + K DM FDS+ DAN GD ++ Sbjct: 161 ALFKKYDLNSDGQIDQSEMDKIVAKMNASGKTTMAK--DMRERFDSMLTNFDAN-GDGMI 331
BLAST of EMLSAG00000004166 vs. L. salmonis peptides
Match: EMLSAP00000004166 (pep:novel supercontig:LSalAtl2s:LSalAtl2s220:103638:120864:1 gene:EMLSAG00000004166 transcript:EMLSAT00000004166 description:"snap_masked-LSalAtl2s220-processed-gene-1.2") HSP 1 Score: 253.832 bits (647), Expect = 1.006e-87 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MVIYIRIKDQQLLINKENKLEIELQTSLYVAPQSIALKNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 MVIYIRIKDQQLLINKENKLEIELQTSLYVAPQSIALKNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE Sbjct: 1 MVIYIRIKDQQLLINKENKLEIELQTSLYVAPQSIALKNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDIKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127
BLAST of EMLSAG00000004166 vs. L. salmonis peptides
Match: EMLSAP00000001205 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:1132930:1137762:1 gene:EMLSAG00000001205 transcript:EMLSAT00000001205 description:"maker-LSalAtl2s11-snap-gene-11.21") HSP 1 Score: 103.219 bits (256), Expect = 2.260e-28 Identity = 70/151 (46.36%), Postives = 76/151 (50.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYL--------------------CLAEV--------------DKEMPD---------------------------IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 +N E KAKRR LFKKFDPNGNKYL C A V DK P+ IK SV+T +GKI+DMEAEF SIDAN G QILFNE +IWALKKNLDIED IDSQDE Sbjct: 18 RNPEAKAKRRELFKKFDPNGNKYLSLAEVDKGMRDVLNIDELFDCKAAVNRAFHSAKNASQKDDKYGPEYLEFREFRLIDTGDDNRVSKEEFCSDKIKASVETWVGKIDDMEAEFASIDANGGGQILFNEFVIWALKKNLDIEDDIDSQDE 168
BLAST of EMLSAG00000004166 vs. nr
Match: gi|225712234|gb|ACO11963.1| (Flagellar calcium-binding protein [Lepeophtheirus salmonis] >gi|225713488|gb|ACO12590.1| Flagellar calcium-binding protein [Lepeophtheirus salmonis]) HSP 1 Score: 88.9669 bits (219), Expect = 1.113e-19 Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 IK SV+T +GKI+DMEAEF SIDAN G QILFNE +IWALKKNLDIED IDSQDE Sbjct: 131 IKASVETWVGKIDDMEAEFSSIDANGGGQILFNEFVIWALKKNLDIEDDIDSQDE 185 HSP 2 Score: 58.9214 bits (141), Expect = 3.305e-8 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +N E KAKRR LFKKFDPNGNKYL LAEVDK M D+ Sbjct: 18 RNPEAKAKRRELFKKFDPNGNKYLSLAEVDKGMRDV 53
BLAST of EMLSAG00000004166 vs. nr
Match: gi|290462151|gb|ADD24123.1| (Flagellar calcium-binding protein [Lepeophtheirus salmonis]) HSP 1 Score: 88.5817 bits (218), Expect = 1.441e-19 Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 IK SV+T +GKI+DMEAEF SIDAN G QILFNE +IWALKKNLDIED IDSQDE Sbjct: 131 IKASVETWVGKIDDMEAEFTSIDANGGGQILFNEFVIWALKKNLDIEDDIDSQDE 185 HSP 2 Score: 58.9214 bits (141), Expect = 3.203e-8 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +N E KAKRR LFKKFDPNGNKYL LAEVDK M D+ Sbjct: 18 RNPEAKAKRRELFKKFDPNGNKYLSLAEVDKGMRDV 53
BLAST of EMLSAG00000004166 vs. nr
Match: gi|290562313|gb|ADD38553.1| (Flagellar calcium-binding protein [Lepeophtheirus salmonis]) HSP 1 Score: 88.1965 bits (217), Expect = 1.845e-19 Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 IK SV+T +GKI+DMEAEF SIDAN G QILFNE +IWALKKNLDIED IDSQDE Sbjct: 131 IKASVETWVGKIDDMEAEFASIDANGGGQILFNEFVIWALKKNLDIEDDIDSQDE 185 HSP 2 Score: 58.9214 bits (141), Expect = 3.410e-8 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +N E KAKRR LFKKFDPNGNKYL LAEVDK M D+ Sbjct: 18 RNPEAKAKRRELFKKFDPNGNKYLSLAEVDKGMRDV 53
BLAST of EMLSAG00000004166 vs. nr
Match: gi|225718592|gb|ACO15142.1| (Flagellar calcium-binding protein [Caligus clemensi]) HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-17 Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 IK S++T +GKI+DMEAEFD ID N G QILF+E + WALKKNLDIED IDSQDE Sbjct: 131 IKSSIETWVGKIDDMEAEFDKIDTNGGGQILFDEFVTWALKKNLDIEDDIDSQDE 185 HSP 2 Score: 56.6102 bits (135), Expect = 2.106e-7 Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +N E KA+RR LFK+FDPNGNKYL LAEVDK M D+ Sbjct: 18 RNPEAKAQRRELFKRFDPNGNKYLSLAEVDKGMRDV 53
BLAST of EMLSAG00000004166 vs. nr
Match: gi|225710094|gb|ACO10893.1| (Flagellar calcium-binding protein [Caligus rogercresseyi] >gi|225711428|gb|ACO11560.1| Flagellar calcium-binding protein [Caligus rogercresseyi]) HSP 1 Score: 80.4925 bits (197), Expect = 1.704e-16 Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 IK +++T +GKI+DM AEFD ID N G QILFNE + WALKKNLDIED IDSQDE Sbjct: 131 IKATIETWVGKIDDMGAEFDKIDTNGGGQILFNEFVDWALKKNLDIEDDIDSQDE 185 HSP 2 Score: 58.151 bits (139), Expect = 6.048e-8 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +N E KAKRR LFK+FDPNGNKYL LAEVDK M D+ Sbjct: 18 RNPEAKAKRRELFKRFDPNGNKYLSLAEVDKGMQDV 53
BLAST of EMLSAG00000004166 vs. nr
Match: gi|225710402|gb|ACO11047.1| (Flagellar calcium-binding protein [Caligus rogercresseyi]) HSP 1 Score: 78.5666 bits (192), Expect = 9.721e-16 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYIDSQDE 127 IK +++T +GKI+D+ AEFD ID N G QILFNE + WALKKNLDIED IDSQDE Sbjct: 131 IKATIETWVGKIDDVGAEFDKIDTNGGGQILFNEFVDWALKKNLDIEDDIDSQDE 185 HSP 2 Score: 58.151 bits (139), Expect = 5.985e-8 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 38 KNLEDKAKRRALFKKFDPNGNKYLCLAEVDKEMPDI 73 +N E KAKRR LFK+FDPNGNKYL LAEVDK M D+ Sbjct: 18 RNPEAKAKRRELFKRFDPNGNKYLSLAEVDKGMQDV 53
BLAST of EMLSAG00000004166 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold84_size396325-snap-gene-1.14 (protein:Tk09679 transcript:maker-scaffold84_size396325-snap-gene-1.14-mRNA-1 annotation:"flagellar calcium-binding protein") HSP 1 Score: 67.3958 bits (163), Expect = 3.643e-15 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0 Query: 73 IKPSVKTRLGKIEDMEAEFDSIDANTGDQILFNELIIWALKKNLDIEDYID 123 IK S++ +G++EDM AEFD ID N G QILFNE + WAL KNLD+ED +D Sbjct: 151 IKASIEKWVGEVEDMGAEFDKIDVNGGGQILFNEFVDWALAKNLDLEDDVD 201 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004166 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000004166 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 18
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BLAST of EMLSAG00000004166 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000004166 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004166 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004166 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 6
BLAST of EMLSAG00000004166 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s220:103638..120864+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004166-686932 ID=EMLSAG00000004166-686932|Name=EMLSAG00000004166|organism=Lepeophtheirus salmonis|type=gene|length=17227bp|location=Sequence derived from alignment at LSalAtl2s220:103638..120864+ (Lepeophtheirus salmonis)back to top Add to Basket
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