EMLSAG00000004433, EMLSAG00000004433-687199 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000004433
Unique NameEMLSAG00000004433-687199
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000004433 vs. C. finmarchicus
Match: gi|592877603|gb|GAXK01080140.1| (TSA: Calanus finmarchicus comp565469_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 5.814e+0
Identity = 16/51 (31.37%), Postives = 26/51 (50.98%), Query Frame = 0
Query:  138 QLPEGF--HKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLS 186
            +   GF  HK    +T+ + +F+EN   I   +  + D   E W+GT L+S
Sbjct: 4979 KFKNGFKKHKLVAPQTVCVTIFDENNGHIMQDVHARNDSPLEKWEGTSLIS 5131          
BLAST of EMLSAG00000004433 vs. C. finmarchicus
Match: gi|592877604|gb|GAXK01080139.1| (TSA: Calanus finmarchicus comp565469_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 5.842e+0
Identity = 16/51 (31.37%), Postives = 26/51 (50.98%), Query Frame = 0
Query:  138 QLPEGF--HKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLS 186
            +   GF  HK    +T+ + +F+EN   I   +  + D   E W+GT L+S
Sbjct: 4979 KFKNGFKKHKLVAPQTVCVTIFDENNGHIMQDVHARNDSPLEKWEGTSLIS 5131          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000004433 (pep:novel supercontig:LSalAtl2s:LSalAtl2s231:31211:32835:1 gene:EMLSAG00000004433 transcript:EMLSAT00000004433 description:"maker-LSalAtl2s231-augustus-gene-0.29")

HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCGTQTSPPEIKHDLTVIKDFDDLLTKSNFIQLPEGFHKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGNVNSGTDETPDSPPSVEECKMEAKESPSE 335
            MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCGTQTSPPEIKHDLTVIKDFDDLLTKSNFIQLPEGFHKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGNVNSGTDETPDSPPSVEECKMEAKESPSE
Sbjct:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCGTQTSPPEIKHDLTVIKDFDDLLTKSNFIQLPEGFHKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGNVNSGTDETPDSPPSVEECKMEAKESPSE 335          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000008076 (pep:novel supercontig:LSalAtl2s:LSalAtl2s47:287231:290661:-1 gene:EMLSAG00000008076 transcript:EMLSAT00000008076 description:"augustus-LSalAtl2s47-processed-gene-3.11")

HSP 1 Score: 110.538 bits (275), Expect = 1.575e-26
Identity = 91/342 (26.61%), Postives = 155/342 (45.32%), Query Frame = 0
Query:    1 MVNTCCFPGCVNS-----RRDRISQSHMXLXAFPTXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADC------GTQTSP--------PEIKHDLTVIKDFD-----DLLTKSNFIQLPEGFHKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGNVNSGTDETPDS 318
            M +TCC P C        + D +    + L   P           AI +K+F+PN+ SRLC  HF+ +DY     D +    RK   +  +  LK +AVP +    P K  +           SP        P +K ++   ++ +     D+  K     LP G H   + + L     E  +P+I  +L I  +L+++L +   +++ +K + I +   + T V  ++N++ +    S   T ++ +E+C  +L   +  E +  R I FI EQL LL K    R++S Q L  CI WE  + + Y+ L+ +D F +P  SYL+ +    + + E P S
Sbjct:    1 MPSTCCAPMCRTGYPGTPKDDDVFFHRLPLKNIPL----LHCWIKAIHRKDFEPNKHSRLCSKHFKQEDYKAIRTDSN--PYRKKPVILIRRNLKIDAVPSIFDRVPAKHPETRQTRRTTASVSPTRFKKEKNPRLKAEVPYFEEKEILSLLDIKKKIKLSHLPSGTHLIKRKDNLLFCFIEGTIPQIHQSLQIFDNLTFKLCNQNTIITQDKYNHICQSEKIET-VSQVQNLIAFAKSLSIDITAKSKLEQCTTVLSTIENEENNFQRKIDFIAEQLDLLSKPERTRQFSIQFLAMCILWESCSPSLYKRLVYEDCFCMPSISYLRNLTGPLNPSTEIPSS 335          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000004011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s214:83119:84574:1 gene:EMLSAG00000004011 transcript:EMLSAT00000004011 description:"snap_masked-LSalAtl2s214-processed-gene-1.9")

HSP 1 Score: 81.2629 bits (199), Expect = 8.781e-18
Identity = 75/296 (25.34%), Postives = 133/296 (44.93%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFP-TXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPG-------KLADCGTQTSPPEIKHDLTVIKDFD------------DLLTKSNFIQLPEGFHKFTKSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIR 276
            M NTC  P C                  P   KE       AIP+ N+KP   SRLC  HF  +DY+    + D  K +    ++ +  LK +A+P + T  P        K       +S    K     ++D+             +LL K +   +P G  + +++  +    F+    +I+ +L ++++L  +L+  T+ +    V  I K+ S +T    + ++L YL  S  C +++ ++ K + +LE+    + S+ R + FI+EQLKL +     RRYS+ LL +C++
Sbjct:    1 MPNTCSAPLCRTGYPGEAKDPTTVFHRVPLKNKELMKKWITAIPRANYKPTIHSRLCSNHFVIEDYVSRRNEFDKTKNK----IAKRSILKADAIPSVFTGIPKSCLKRIPKPRSNNASSSARLNKQRKKSMEDYQKFLDSDRVDSIRELLEKFDRRNIPSGIDEISRNNEMMFLSFDWENQEIRFSLKVQENLKIQLYHQTMQIPLSDVRHICKE-SKITATSQVGSLLSYLK-SLTC-SKKLIINKAVELLESVVLDQVSEVRHVDFIIEQLKLAFTTLKQRRYSQGLLTSCLQ 289          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000002611 (pep:novel supercontig:LSalAtl2s:LSalAtl2s151:424347:426407:1 gene:EMLSAG00000002611 transcript:EMLSAT00000002611 description:"augustus-LSalAtl2s151-processed-gene-4.1")

HSP 1 Score: 71.2478 bits (173), Expect = 5.799e-14
Identity = 74/300 (24.67%), Postives = 128/300 (42.67%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPKKN---FKPNRSSRLCGLHFRTKDYI--QADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCGTQ------TSPPEI-KHDLTVIK------------DFDDLLTKSNFIQLPEGFHKFTKSETLHIALFEE---NVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLS------ISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYS 267
            M N CC P C +    + S + + L +FP  K    A   AIP+ +   + P++ SR+C LHF   D++   AD  R         +   K +LKP AVP +  + P  L+   +Q      TS   I K +  +++            DF DL  K    + P   H     +++      E   +  +I+ +++I +DL++ L+   + L    V+ +  +  + +  L ++NIL ++       +    +   N VE  +  L   D       +LI FI EQL L+      ++YS
Sbjct:  138 MPNKCCVPKCTSGYDGKPSIARLSLHSFPLDKSSKGAWLRAIPRDSNGTWAPSKYSRVCSLHFHEDDFVYESADHKRKYRSYGVGDNKLQKRYLKPGAVPSIFPNLPKYLSPVKSQRPTSRATSSARISKENEDIVEAQQSLFLKDSVIDFSDLCLKCGDEKFPTNVHWRRTEDSIQFYCLSELCSDFVEIEFSVMINRDLTFNLYYKNVNLDRSCVNPLTTNRKITSVSL-LQNILSHMKSIPFPPMKDMINHLXNXVESIVENLXPSDIDSHKRKKLI-FIREQLALINSTPKQKQYS 435          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000009597 (pep:novel supercontig:LSalAtl2s:LSalAtl2s617:147807:148969:-1 gene:EMLSAG00000009597 transcript:EMLSAT00000009597 description:"maker-LSalAtl2s617-augustus-gene-1.41")

HSP 1 Score: 66.6254 bits (161), Expect = 1.901e-12
Identity = 78/343 (22.74%), Postives = 148/343 (43.15%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSH------MXLXAFPTXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGK---LADCGTQTSPPEIKHDLTV---------------IKDFDDLLTKSNFIQLPEGFHKFTKSETLH---IALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEEN--MVEKCINILEA--QDYTEESDARLILFIVEQLKLL---YKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGNVN 309
            MVN C   GC +    + +++H      +    FP  +   +     + +KN+ P+  S LC  HF  +D+ Q    ++  K+    ++ C   LK  +VP    + P +   L    ++ +    +H   +               I+  DDL  K     LP       +   L+   I + +    ++  +L I +DLS+        L   +   I+K  +    + ++ N++ +L  S++CD E+   ++ K   I+E+   D+ +E + + + F+ EQL L    YK +  RRYS  L+     W++ +   YR  +++D   LP   YLK++ + N
Sbjct:    1 MVNKCVVIGCRSGYNLKKNETHSEVKEDISFHRFPKDQILREKWIRNLSRKNYTPSSHSVLCSKHFDVQDFEQQYLYQNP-KELNSKNIKCSNKLKQGSVPSKFPNLPKETKMLTPSRSERATSSARHQRQLERLNTQAKEFYQKNNIQSLDDLEKKLGKATLPSQVSMIKQEGKLYLITIGMSKFGTQELSFSLEINEDLSFTACVNGFKLKKNRFGHILK-TNTFEHLFEVINLVAFLK-STDCDVEDKSKVLGKACKIIESVIPDF-KEKEKKSLSFLNEQLSLCVIPYKQS--RRYSSSLISIASNWKETSPKLYRKFLQEDLLSLPCERYLKQLNSNN 337          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000005190 (pep:novel supercontig:LSalAtl2s:LSalAtl2s273:488071:489570:-1 gene:EMLSAG00000005190 transcript:EMLSAT00000005190 description:"augustus-LSalAtl2s273-processed-gene-4.12")

HSP 1 Score: 62.7734 bits (151), Expect = 3.014e-11
Identity = 64/243 (26.34%), Postives = 107/243 (44.03%), Query Frame = 0
Query:   44 KKNFKPNRSSRLCGLHFRTKDY------------IQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCGT---------QTSPPEIKHDLTVIKD--FDDLLTKSNFIQ---LPEGFHKFTKSETLHIALFE-ENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDT--EENMVEKCINILEAQDYTEESDARLILFIVEQLKLL 257
            +K+ +PN +SR+C  HF   DY            I  +  R LLK     D    +F +  ++  M  S P  +    +             P +K ++   K+  F  LL   N I    LP G H   K ++L     + E +P+I  +L I  +L+++L+    +++ +KV  I K    +  V  IEN+L ++    E D    ++ +EKCI IL   +  +    + I FI +QL L+
Sbjct:  102 RKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKN----DAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKS-EKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLV 339          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000012721 (pep:novel supercontig:LSalAtl2s:LSalAtl2s965:308987:310501:-1 gene:EMLSAG00000012721 transcript:EMLSAT00000012721 description:"augustus-LSalAtl2s965-processed-gene-3.12")

HSP 1 Score: 60.8474 bits (146), Expect = 1.755e-10
Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 0
Query:  167 TLIIKKDLSYELWDGTILLSNEKV----SDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIG 306
            T+I+K DLS+EL+   I + N  V    S+ +K +S +  VL   N    L +    +   N ++  I+   A +  + +  +L  FI++QL++L    S RRY+ +LL T + W   +   Y+ L ED    LP   +L ++ 
Sbjct:  318 TVIVKLDLSFELYSKEIFIDNNAVNHLTSNKIKSVSSLLKVLAYMNSFKSLELEKSVNEAINTLKVVIDKQHATNQQKLTRKKLN-FIIQQLEILEVKPSRRRYTPELLATAMIWNNISPVLYKKLQEDQVLTLPLQKHLSKLA 460          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000009178 (pep:novel supercontig:LSalAtl2s:LSalAtl2s580:19682:21505:-1 gene:EMLSAG00000009178 transcript:EMLSAT00000009178 description:"snap-LSalAtl2s580-processed-gene-0.14")

HSP 1 Score: 58.5362 bits (140), Expect = 3.227e-10
Identity = 64/255 (25.10%), Postives = 109/255 (42.75%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPK--KNFKPNRSSR----LCGLHFRTKDYIQADWDRDLLKKR---KDADVSCKLFLKPEAVPFMETSEPGKLADCGTQTSPPEIKHDLTVIKDFDDLLTKSNFIQLPEGFHKFT----KSETLHIALFEENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEES 242
            M N C  PGC   +  +I   H+ +  FP    +      AI K   N+    SS+    LC LHF+  D+     D +  +K+    D  V  K  LK +AVP + ++ P  +                       + L K   I LP GF+       K + L     E  +P ++  + I +D S++ +    ++  ++   +VK+  ++T  L I+NIL  L  S E D +E+ +++ +  L  Q+  EE+
Sbjct:    1 MPNGCVAPGCTVGQPRKIKPPHVTIHRFPNNPTRRLKWIAAIKKVRNNWDYPESSKTIVVLCSLHFQPGDFTYESKDSNPSRKKMKINDGKVK-KRRLKEDAVPSIYSNLPSSM-------------------NSLKNSLLKEGSIFLPSGFNVLQINEDKIDVLKFCEGETGLPVVERGITIHEDQSFKAFLHGYIVPADRFKHLVKNDGILTETLQIQNILSLLD-SIETDEDESSIKEALYNL--QEKVEEA 232          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000010466 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6961:2223:3262:-1 gene:EMLSAG00000010466 transcript:EMLSAT00000010466 description:"augustus-LSalAtl2s6961-processed-gene-0.0")

HSP 1 Score: 53.1434 bits (126), Expect = 3.806e-8
Identity = 80/314 (25.48%), Postives = 131/314 (41.72%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPK--KNFKPNRSSR----LCGLHFRTKDYIQADWDRDLLKKR---KDADVSCKLFLKPEAVPFMETSEPGK---------LADCGTQTSPPEIKHDLTVIKD----------------FDDLLTKSNFIQLPEGFHKF-TKSETLHIALF---EENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQ----DYTEESDARLILFIVEQLKLLYKGNSHR-RYSKQLL 271
            M   C  PGCV  +  R    ++    FPT   +      AI K   N+  +  S+    LC LHF+  D+     D +  +++   KD  V  K  LK EA P   ++ P           + +     SP  ++  LT+++                 F  LL + N I LP GF  F  K + + I  F   +  +P ++  + I +DLS++ +  + ++       +VK   ++   L I  IL  L    E D EE ++++ + ILE +       EE  A+L  F +EQ  L  +   +   + KQLL
Sbjct:    1 MPYACAAPGCVVGQPWRKISPNVSTHRFPTDPTRRRKWIDAIKKVRDNWDFDEYSKKVGGLCSLHFQPGDFTYESRDSNSSRRKKEIKDGKVK-KPRLKREAXPSFSSNLPTSSSTATSTYFIKESKRVESPKGLRDPLTLLESPNKTKVEAKKIPSFATFSSLLKEGN-ISLPNGFKVFQMKPKIIDILKFCESQTGLPVVERGITINEDLSFKAFLHSSIVPPHPFKHLVKKDGILEETLQIPCILSLLQ-DIEMDKEECLIKEALYILEKKVKEAVLPEEKKAKL-KFAIEQGNLALRDIKYSPGFHKQLL 310          
BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Match: EMLSAP00000012741 (pep:novel supercontig:LSalAtl2s:LSalAtl2s967:28852:32667:-1 gene:EMLSAG00000012741 transcript:EMLSAT00000012741 description:"snap-LSalAtl2s967-processed-gene-0.100")

HSP 1 Score: 51.6026 bits (122), Expect = 9.196e-8
Identity = 48/187 (25.67%), Postives = 87/187 (46.52%), Query Frame = 0
Query:  124 IKDFDDLLTKSNFIQLPEGFHKFTKSETLHIALF--EENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENMVEKCINILEAQDYTEESDARLIL-FIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGN 307
            + D    L+KSN   LP+G ++ +  + + ++    ++ VP I   L +  DL+Y ++   + L   ++  I     L +   D+  IL YL   S+   + + ++  I +LE   Y ++  ++  L F++EQL L       RRYS + L     W   + A Y  + E     +P  S ++RI N
Sbjct:   95 LTDIKKKLSKSN---LPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHL-SRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITN 277          
BLAST of EMLSAG00000004433 vs. Select Arthropod Genomes
Match: gb|KFM60107.1| (Transposable element P transposase, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.3806 bits (137), Expect = 4.067e-8
Identity = 82/340 (24.12%), Postives = 148/340 (43.53%), Query Frame = 0
Query:    1 MVNTCCFPGCVNSRRDRISQSHMXLXAFPTXKEKCDAXXXAIPKKNFKPNRSSRLCGLHFRTKDYIQAD--WDRD--LLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCG----TQTSPPEIKHDLTVIKDF---DDLLTKSNFIQLPE----GFHKFTKSETL----HIALFEENV---PKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDTEENM----------VEKCINILEAQDYTEESDARLILFIVEQLKLLYKGNSHRRYSKQLLETCIRWEKRNTAFYRMLIEDDYFILPRTSYLKRIGNV 308
            M + CC PGC  S  D+ + +++ +  FP   EK       IP++N+ P+  S +C  HF   D I+ D   DRD  +LK  +         LK  A P +  + P  L +      T  S    K D   ++ F   D + + S+F +  +     F+  +K   +    H+ L   N+   P++ +++ I  D+S  ++ G I +       I+ +   +    ++ENIL ++    + D  E +           +KCI+    +D  +        FI+EQ+ L  K    RRYS +LL        ++++ Y +L +     +P T +L +I ++
Sbjct:    1 MPDRCCVPGC-QSNYDK-AGTYVSVFKFPKDVEKKSIWCKKIPRRNWSPSARSVVCEKHFIQSDIIRIDEISDRDGTILKVPRKCPK-----LKENAYPSIFPNCPKYLTENKPTPRTSRSEKLAKSDEIALQQFLDKDRIKSFSDFCEQLDLRVNSFNLISKPIVIKNSDHVFLINLNLLSAPRVLSSIKINNDMSLNVFFGDISVPVSHFKIILNNPDHLLRWSELENILSFIKNMQKDDLNEVLPSEKEKSVYHWKKCIS--PDEDMYDNKK-----FILEQMNLCDKSKMARRYSSELLIFAYSLYMKSSSCYSLLYDSGLLSVPSTDHLGKITSI 326          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000004433 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004433 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 2
Match NameE-valueIdentityDescription
gi|592877603|gb|GAXK01080140.1|5.814e+031.37TSA: Calanus finmarchicus comp565469_c1_seq2 trans... [more]
gi|592877604|gb|GAXK01080139.1|5.842e+031.37TSA: Calanus finmarchicus comp565469_c1_seq1 trans... [more]
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BLAST of EMLSAG00000004433 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 11
Match NameE-valueIdentityDescription
EMLSAP000000044330.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s231:31211... [more]
EMLSAP000000080761.575e-2626.61pep:novel supercontig:LSalAtl2s:LSalAtl2s47:287231... [more]
EMLSAP000000040118.781e-1825.34pep:novel supercontig:LSalAtl2s:LSalAtl2s214:83119... [more]
EMLSAP000000026115.799e-1424.67pep:novel supercontig:LSalAtl2s:LSalAtl2s151:42434... [more]
EMLSAP000000095971.901e-1222.74pep:novel supercontig:LSalAtl2s:LSalAtl2s617:14780... [more]
EMLSAP000000051903.014e-1126.34pep:novel supercontig:LSalAtl2s:LSalAtl2s273:48807... [more]
EMLSAP000000127211.755e-1029.17pep:novel supercontig:LSalAtl2s:LSalAtl2s965:30898... [more]
EMLSAP000000091783.227e-1025.10pep:novel supercontig:LSalAtl2s:LSalAtl2s580:19682... [more]
EMLSAP000000104663.806e-825.48pep:novel supercontig:LSalAtl2s:LSalAtl2s6961:2223... [more]
EMLSAP000000127419.196e-825.67pep:novel supercontig:LSalAtl2s:LSalAtl2s967:28852... [more]

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BLAST of EMLSAG00000004433 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004433 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|KFM60107.1|4.067e-824.12Transposable element P transposase, partial [Stego... [more]
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BLAST of EMLSAG00000004433 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004433 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s231supercontigLSalAtl2s231:31211..32835 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s231-augustus-gene-0.29
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000004433 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000004433EMLSAT00000004433-700280Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s231:31211..32835+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000004433-687199 ID=EMLSAG00000004433-687199|Name=EMLSAG00000004433|organism=Lepeophtheirus salmonis|type=gene|length=1625bp|location=Sequence derived from alignment at LSalAtl2s231:31211..32835+ (Lepeophtheirus salmonis)
GTAGACGTAATTACTACTAAAAWGTTWAGTAAAAAAAKAAACTTACAAAA ACTAGGAGACGAGTTCGGAGTTGTAAGTAAGATTGACTAACTAAGGAATG AATTGTGGAGTAATTAATGATTATTATTATGAGGAAGTTTTAAGTGTGTA GGTTTGTTTGTGACTCGCAATTATAATAGATAAAGTAGTAGTTGTTACGA GAACGTTAGTTTCTTGAATCCTTTTTTGGCGTTGGAACATGGTGAATACG TGTTGTTTCCCAGGATGCGTGAATTCCAGACGAGATCGGATATCTCAGTC TCACATGYCCCTTCMCGCCTTTCCCACAGAMAAAGAAAAGTGTGATGCAK GGAKGSGAGCCATTCCTAAAAAGAATTTTAAGCCTAATCGATCCAGTCGA CTCTGTGGTCTTCATTTCAGAACAAAGGACTATATCCAAGCAGACTGGGA TCGAGATTTACTCAAGAAACGAAAAGATGCGGATGTGTCCTGTAAATTGT TTTTAAAGCCTGAAGCCGTTCCTTTTATGGAGACGAGTGAGCCTGGGAAA TTAGCAGACTGCGGGTAGATTATTTATTAGACCAATCCTTATCTCTCTCT AATAGTAATGTATCTGTTTCCTTTCAGGACTCAAACCTCTCCTCCAGAGA TCAAGCACGATCTCACAGTCATTAAGGACTTTGATGATCTCCTCACTAAA TCGAATTTTATACAACTCCCAGAAGGATTTCACAAGTTCACAAAGAGTGA GACACTTCACATTGCATTATTTGAAGAAAACGTTCCTAAAATCAAAAATA CTCTCATTATCAAAAAGGACTTGAGTTATGAACTCTGGGACGGGACCATC CTACTCTCAAACGAGAAGGTCTCTGACATTGTTAAGGATATTTCTCTCGT TACTTGTGTTCTAGACATTGAGAATATTCTTTTATATCTAAGCATTTCCT CAGAGTGTGACACGGAGGAGAACATGGTAGAGAAGTGTATCAATATCCTT GAGGCTCAGGATTATACAGAAGAGAGTGATGCTAGACTTATTTTATTCAT TGTTGAACAGCTTAAGCTTCTCTATAAGGGTAATTCCCATCGACGCTACT CCAAGCAGCTTCTCGAGACCTGCATTCGATGGGAAAAGAGGAATACTGCT TTTTATCGAATGTTAATAGAAGATGACTATTTTATACTTCCTAGAACTTC TTACTTAAAAAGAATTGGAAATGTCAATAGTGGTACGGATGAAACACCCG ACTCACCTCCCTCCGTGGAAGAATGTAAAATGGAAGCCAAAGAATCTCCC TCAGAGTGAAAATTTATGATTAATTGTATATATATACAAATTGATAATCG TATCGATATTAGTTATCATTATATTATTGTGTATGTACTTTAACTCATTG ACACCCTAATTTTATTCTTTCAATATTTTGTGTGTGAAATCGTCCACATC ATTTTAATTTATTCATAAGTTATTATGTCATATAACCCAATAAATTAAGT GTAATAGAATTACATTGGGGTGTTTTGGTTTGAATTGAGTCAAGATTTGA CGGATTTTATTACATAAATTGCCTGTGATATACGCGAGTGATGTATTGAT TAGACTAATATAAAGGGATAATAGA
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