EMLSAG00000005253, EMLSAG00000005253-688019 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005253
Unique NameEMLSAG00000005253-688019
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592866341|gb|GAXK01091221.1| (TSA: Calanus finmarchicus comp261078_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 125.176 bits (313), Expect = 4.216e-32
Identity = 70/216 (32.41%), Postives = 120/216 (55.56%), Query Frame = 0 
Query:   17 LFTHPSDASPIVFTMN-EGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGV---SLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKN----------RKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHIN 218
            LF  P D  P+ F M  +G E  R+++++E+ GG++            +R+     ++L +D D FD  Y+LDCVKE+ +  ++ +YR+     S+ E+YDP D+L+G K W D+ + +      +E D+ D     P ++S+           R   S + Q+ I+ ++++H  Y  +K  + W+RM+ GG+C G RT  S+KEHFRK+I+P I+
Sbjct:   57 LFIRP-DGLPMAFMMTYKGVETQRMKQLVEERGGVVFDRPSLAYRDNMVRLLVGGEVSLRRDQDMFDHRYVLDCVKEDMILPNMLDYRINSHLPSILEQYDPVDVLLGYKRWRDIPEAEGERVSDIEEDDCDDGF--PGSDSQYNSRQKLFKSFRMPYSKEDQLEIVNFLVSHSAYKLVKGNSIWQRMEEGGLCKGARTWQSMKEHFRKKIIPQIH 695
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592866340|gb|GAXK01091222.1| (TSA: Calanus finmarchicus comp261078_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 97.4413 bits (241), Expect = 7.737e-23
Identity = 58/196 (29.59%), Postives = 102/196 (52.04%), Query Frame = 0 
Query:   17 LFTHPSDASPIVFTMN-EGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGV---SLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKN----------RKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSG 198
            LF  P D  P+ F M  +G +  R+++++E  GG++            +R+     ++L +D+D FD  Y+LDCVKE+ +  +L +YR+     S+ E+YDP D+L+G K W D+ + +  +   +E D+ D     P ++S+           R   S + Q  I+ ++++H  Y  +K    W RM+ GG+C G
Sbjct:   50 LFIRP-DGLPMAFMMTYKGMQTQRVKQLVEDRGGVVLDQPSLVYRDSMVRLLVGGEVSLRRDLDIFDYRYVLDCVKEDMILPNLLDYRINSHLPSILEQYDPVDVLLGYKRWKDIIEVEGEKVSDIEEDDCDDGF--PGSDSQYNSRQKLFKSFRMPYSKEDQFEIVNFLVSHSAYKVVKGNTIWERMEDGGLCKG 628
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592851079|gb|GAXK01106465.1| (TSA: Calanus finmarchicus comp119958_c6_seq2 transcribed RNA sequence)

HSP 1 Score: 88.1965 bits (217), Expect = 3.899e-18
Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 0 
Query:   22 SDASPIVFTMNE-GPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGV---SLFEEYDPYDILIGEKTWIDLKKRKNIEE-EYMELDNFDKALLTP-SANSKNRKSNSYD----GQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHIN 218
            +D  P+ F M   G E  ++++++E GGG++            IR+  +  I ++KD D FD  YI+DCV ++ L  +L +YR+     S+FE Y+P DIL G   W D+ K+   E    +E D   + +     A  ++ K++        Q  I+ +I+ +  +  +K    W+RM+   V  G R+  SLKEHFRK I+  I+
Sbjct:   70 ADGQPMAFLMGPTGFERQQVKQLVEAGGGVILNQPTLTYRDYVIRLLVRTEIPIKKDQDMFDYKYIIDCVDKDELLPNLKDYRITSHVPSIFENYNPVDILQGILKWSDVPKKPTGERVSDIEDDEVGEDMRRSFEAEYRHHKAHKLPYCKKEQKEIVDWIVKYSAFKLVKGNLVWQRMEEARVGRG-RSWQSLKEHFRKGIIGQIH 687
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592851080|gb|GAXK01106464.1| (TSA: Calanus finmarchicus comp119958_c6_seq1 transcribed RNA sequence)

HSP 1 Score: 88.1965 bits (217), Expect = 3.908e-18
Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 0 
Query:   22 SDASPIVFTMNE-GPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGV---SLFEEYDPYDILIGEKTWIDLKKRKNIEE-EYMELDNFDKALLTP-SANSKNRKSNSYD----GQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHIN 218
            +D  P+ F M   G E  ++++++E GGG++            IR+  +  I ++KD D FD  YI+DCV ++ L  +L +YR+     S+FE Y+P DIL G   W D+ K+   E    +E D   + +     A  ++ K++        Q  I+ +I+ +  +  +K    W+RM+   V  G R+  SLKEHFRK I+  I+
Sbjct:   70 ADGQPMAFLMGPTGFERQQVKQLVEAGGGVILNQPTLTYRDYVIRLLVRTEIPIKKDQDMFDYKYIIDCVDKDELLPNLKDYRITSHVPSIFENYNPVDILQGILKWSDVPKKPTGERVSDIEDDEVGEDMRRSFEAEYRHHKAHKLPYCKKEQKEIVDWIVKYSAFKLVKGNLVWQRMEEARVGRG-RSWQSLKEHFRKGIIGQIH 687
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592866339|gb|GAXK01091223.1| (TSA: Calanus finmarchicus comp261078_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.937e-3
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0 
Query:  166 VHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHI 217
            + ILKYI  +  +  +     W+R++   V  G RT  S+KEHFRK+I+P I
Sbjct:  279 LDILKYIEDNDMFAEIGGNRLWKRIEEENVIEG-RTWQSMKEHFRKKIIPQI 431
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592866342|gb|GAXK01091220.1| (TSA: Calanus finmarchicus comp261078_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 7.318e-3
Identity = 22/67 (32.84%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:  152 ANSKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHIN 218
             + KN K  +    ++ILK+I  + ++  +K    W+ ++   +  G RT  S+KEHFRK+I+P I+
Sbjct: 1600 GSRKNAKYYTKAEDLNILKFIEENQRFEDVKGNKVWQDIEEKEILEG-RTWQSMKEHFRKKIIPQIH 1797
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592866338|gb|GAXK01091224.1| (TSA: Calanus finmarchicus comp261078_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 2.615e-1
Identity = 27/71 (38.03%), Postives = 38/71 (53.52%), Query Frame = 0 
Query:  166 VHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILRG 236
            + ILKYI  +  +  +     W+R++   V  G RT  S+KE FRK I+    IK Y   S+E +NK  RG
Sbjct:  279 LDILKYIEDNDMFAEIGGNRLWKRIEEENVIEG-RTWQSMKERFRKVIIKR--IKVYG-LSKETVNK-FRG 476
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592827132|gb|GAXK01129389.1| (TSA: Calanus finmarchicus comp236765_c0_seq16 transcribed RNA sequence)

HSP 1 Score: 33.113 bits (74), Expect = 1.569e+0
Identity = 24/82 (29.27%), Postives = 42/82 (51.22%), Query Frame = 0 
Query:  154 SKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILR 235
            S+ R+  S   +  ++ Y + +G Y+       W++M+   +C G RT  SL+E F K I    N+K +   S++ L K+ R
Sbjct:  333 SRYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI--EKNLKQF-GVSKQQLEKVDR 566
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592827138|gb|GAXK01129386.1| (TSA: Calanus finmarchicus comp236765_c0_seq13 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 1.882e+0
Identity = 24/82 (29.27%), Postives = 42/82 (51.22%), Query Frame = 0 
Query:  154 SKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILR 235
            S+ R+  S   +  ++ Y + +G Y+       W++M+   +C G RT  SL+E F K I    N+K +   S++ L K+ R
Sbjct:  333 SRYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI--EKNLKQF-GVSKQQLEKVDR 566
[Close]
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Match: gi|592827140|gb|GAXK01129385.1| (TSA: Calanus finmarchicus comp236765_c0_seq12 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 1.885e+0
Identity = 24/82 (29.27%), Postives = 42/82 (51.22%), Query Frame = 0 
Query:  154 SKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILR 235
            S+ R+  S   +  ++ Y + +G Y+       W++M+   +C G RT  SL+E F K I    N+K +   S++ L K+ R
Sbjct:  333 SRYRQPYSRGEEEAVVNYFLRNGGYSVRGGNAVWQKMEEDWICPG-RTWQSLRERFDKNI--EKNLKQF-GVSKQQLEKVDR 566
[Close]
BLAST of EMLSAG00000005253 vs. L. salmonis peptides
Match: EMLSAP00000005253 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2800:1463:11742:1 gene:EMLSAG00000005253 transcript:EMLSAT00000005253 description:"maker-LSalAtl2s2800-snap-gene-0.6")

HSP 1 Score: 717.227 bits (1850), Expect = 0.000e+0
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0 
Query:    1 MASKNTLFHDEYAPFSLFTHPSDASPIVFTMNEGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILRGWKGSKTSFNVEVLERSSRLKQNVPCSDDAAMHKQANVKIENSVGPLQKSSRKLINKDKTHFDESFGIINKKEEVTAMPSYKRIKICNLNKLEASSTPIXXXISRSQYSMVIPN 349
            MASKNTLFHDEYAPFSLFTHPSDASPIVFTMNEGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILRGWKGSKTSFNVEVLERSSRLKQNVPCSDDAAMHKQANVKIENSVGPLQKSSRKLINKDKTHFDESFGIINKKEEVTAMPSYKRIKICNLNKLEASSTPIXXXISRSQYSMVIPN
Sbjct:    1 MASKNTLFHDEYAPFSLFTHPSDASPIVFTMNEGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKNRKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILRGWKGSKTSFNVEVLERSSRLKQNVPCSDDAAMHKQANVKIENSVGPLQKSSRKLINKDKTHFDESFGIINKKEEVTAMPSYKRIKICNLNKLEASSTPIXXXISRSQYSMVIPN 349
[Close]
BLAST of EMLSAG00000005253 vs. L. salmonis peptides
Match: EMLSAP00000005371 (pep:novel supercontig:LSalAtl2s:LSalAtl2s28:125235:128394:-1 gene:EMLSAG00000005371 transcript:EMLSAT00000005371 description:"maker-LSalAtl2s28-augustus-gene-1.51")

HSP 1 Score: 511.531 bits (1316), Expect = 6.133e-173
Identity = 252/341 (73.90%), Postives = 285/341 (83.58%), Query Frame = 0 
Query:    1 MASKNTLFHDEYAPFSLFTHPSDASPIVFTMNEGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKNRKSN---SYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILPHINIKTYPQFSEEDLNKILRGWKGSKT----SFNVEVLERSSRLKQNVPCSDDAAMHKQANVKIENSVGPLQKSSRKLINKDKTHFDESFGIINKKEEVTAMPSYKRIKICNLNKLEASSTPI 334
            M S  TLFH+ YAPF+LFTHPSDASPIVF MNEGPEY+R+++MIE GGG+LEKA KFD THKRIRIHDKKMI LEK+VD FDMTYILDCVKENNLR DL NYRLG+SLFEEYDPYDILIGEKTW+D+KK  +I EE  +LDNFDKA+LTPSA+SKNRK N   S+D QV ILK+II+HGK+N LKDINTWR M+  GVCSGLR A SLKEHFRKQILP I++KTYPQFSEEDLNKILRGWKGSK     SF VEVLERSS  K++VPC++DAA H+ ANVK ENSV  L+KS RKLI+ DKT  DESF   NK+EE    PS KRIK+C+LNK +ASSTPI
Sbjct:    1 MTSMETLFHEGYAPFTLFTHPSDASPIVFCMNEGPEYFRIRKMIESGGGVLEKARKFDGTHKRIRIHDKKMIALEKEVDIFDMTYILDCVKENNLRTDLGNYRLGISLFEEYDPYDILIGEKTWMDIKKLNDIGEECSQLDNFDKAVLTPSASSKNRKINRPYSHDEQVDILKFIISHGKHNKLKDINTWREMEADGVCSGLRXATSLKEHFRKQILPRIHVKTYPQFSEEDLNKILRGWKGSKAFVPPSFKVEVLERSSTPKKSVPCNNDAANHRXANVKSENSVRALRKSPRKLIHSDKTRIDESFDTNNKEEEEPTNPSNKRIKLCSLNKPKASSTPI 341
[Close]
BLAST of EMLSAG00000005253 vs. L. salmonis peptides
Match: EMLSAP00000000138 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:425:1572:-1 gene:EMLSAG00000000138 transcript:EMLSAT00000000138 description:"maker-LSalAtl2s1021-snap-gene-0.40")

HSP 1 Score: 185.267 bits (469), Expect = 5.280e-57
Identity = 90/102 (88.24%), Postives = 95/102 (93.14%), Query Frame = 0 
Query:   71 MINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMELDNFDKALLTPSANSKNRKSNS--YDGQVHILK 170
            MINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYME+DNFDKALLTPSANSKNRK+ +  +  Q  +LK
Sbjct:    1 MINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIGEKTWIDLKKRKNIEEEYMEIDNFDKALLTPSANSKNRKNCNTLWLSQTDVLK 102
[Close]
BLAST of EMLSAG00000005253 vs. nr
Match: gi|1067073071|ref|XP_018020006.1| (PREDICTED: uncharacterized protein LOC108676446 [Hyalella azteca])

HSP 1 Score: 64.3142 bits (155), Expect = 1.280e-7
Identity = 55/210 (26.19%), Postives = 93/210 (44.29%), Query Frame = 0 
Query:   26 PIVFTMNEGPEYYRLQEMIEKGGGLLEKASKFDETHKRIRIHDKKMINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYD------ILIGEKTWID-------LKKRKNIEEEYMELDNFDKALLTPSANSKN-------RKSNSYDGQVHILKYIITHGKYNSLKDINTWRRMKVGGVCSGLRTAISLKEHFRKQILP 215
            P  F+M + PE  R++ +IE  GG++   S +      + I D+  I+       F   YI DCV  ++  N L +YR+     ++  PYD      +++GE TW +       +       +      +      +   NSK        R+  S + + +I+K+I+ +    ++     W  M    VC G RT  SLKEHF+K+I+P
Sbjct:   19 PFAFSMYDCPEKPRIKALIEGHGGVM-MPSPYGPHTIHLGIPDRITISQRP---TFSSRYIEDCVAIDDFLN-LKDYRI-----DQGPPYDAQKMLRVMLGEMTWEEVIPIQCCIPPPPPRPDRSSSSSSSSDDESSSVNNSKQVKVVFSKRRDYSNEDRENIVKFILHNDLAEAVHGRKMWENMAAAKVCRGRRTWHSLKEHFKKKIIP 218
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005253 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000005253 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592866341|gb|GAXK01091221.1|4.216e-3232.41TSA: Calanus finmarchicus comp261078_c2_seq2 trans... [more]
gi|592866340|gb|GAXK01091222.1|7.737e-2329.59TSA: Calanus finmarchicus comp261078_c2_seq3 trans... [more]
gi|592851079|gb|GAXK01106465.1|3.899e-1830.92TSA: Calanus finmarchicus comp119958_c6_seq2 trans... [more]
gi|592851080|gb|GAXK01106464.1|3.908e-1830.92TSA: Calanus finmarchicus comp119958_c6_seq1 trans... [more]
gi|592866339|gb|GAXK01091223.1|1.937e-340.38TSA: Calanus finmarchicus comp261078_c2_seq4 trans... [more]
gi|592866342|gb|GAXK01091220.1|7.318e-332.84TSA: Calanus finmarchicus comp261078_c2_seq1 trans... [more]
gi|592866338|gb|GAXK01091224.1|2.615e-138.03TSA: Calanus finmarchicus comp261078_c2_seq5 trans... [more]
gi|592827132|gb|GAXK01129389.1|1.569e+029.27TSA: Calanus finmarchicus comp236765_c0_seq16 tran... [more]
gi|592827138|gb|GAXK01129386.1|1.882e+029.27TSA: Calanus finmarchicus comp236765_c0_seq13 tran... [more]
gi|592827140|gb|GAXK01129385.1|1.885e+029.27TSA: Calanus finmarchicus comp236765_c0_seq12 tran... [more]

Pages

back to top
BLAST of EMLSAG00000005253 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000052530.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s2800:1463... [more]
EMLSAP000000053716.133e-17373.90pep:novel supercontig:LSalAtl2s:LSalAtl2s28:125235... [more]
EMLSAP000000001385.280e-5788.24pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:425:... [more]
back to top
BLAST of EMLSAG00000005253 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000005253 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000005253 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|1067073071|ref|XP_018020006.1|1.280e-726.19PREDICTED: uncharacterized protein LOC108676446 [H... [more]
back to top
BLAST of EMLSAG00000005253 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2800supercontigLSalAtl2s2800:1463..11742 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s2800-snap-gene-0.6
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005253 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005253EMLSAT00000005253-701100Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s2800:1463..11742+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005253-688019 ID=EMLSAG00000005253-688019|Name=EMLSAG00000005253|organism=Lepeophtheirus salmonis|type=gene|length=10280bp|location=Sequence derived from alignment at LSalAtl2s2800:1463..11742+ (Lepeophtheirus salmonis)
CAGGTATCACTGAAATCAATAGAAAAAGCTACATCAAATTAAGGTAATTA
TCTCCTTCAAATCTAAATTTTTGAAATCCTTTAACATACCTAATAGCATA
GGCTCTGACTTCAATACGCTCCCATATACTTTAATTAAAGGGCTCAGGCA
AGGATGAAGGCAAAAAGTGTTTCAGTCATTATATAGCATTNGATAAAAAA
ATACATAGCTGAATTCACCAGCAACGTCCTTCATCCAAGAAATGTGTTTA
TTCTTAAGTAAATCATTGTATAAGGCCCATTTCTTGATATATAAAACTGA
GTTTTGTTCCTCAAAACGACAATATTATAGACCAGATATACTGACGTCGT
GGATCCCCAAGGTCCTCTCATTTCATGAGACGGTGCATTATTCAATATCC
TAGTTTACCGGGATACATTGAATTTTTTACAAATTTCGAACATTTTGGCA
TTGGCGTCCACAGCATATCTGAGATCTAATTGTGGATTTCGTTTGGCATC
TAAAAAATGAGTTTATATAATATTTGAAAACTTTTTTTTTGTTGGGTAAA
CTCTGAAAAATAAAAGCCAAATATTAAATAATAATATTAATTTAGGGAAT
CTCTAAAAAATCATTGATAAAAGTGTGTCATAATTAAATTTACACCCGNN
NNNNNNNNNNNNNNNNNNNNTCTAAATCTTTCCTTTTGTTAATTAAGGCA
GGAGCGATATGCCTACGTTTCGAATGAATTATTTGAGTTATTTGAAACTC
TGGTCTGACGAAGGGGACTACTACTCCAAAAATATTCATAAAACCCAACT
TCCTTACGTTCCCATTCCTGAACCTCTTCCACCTGACCATGAAATCCTCA
ATCAGAGAAGACAAGTGATCGCAAAGAGATTAATTGAAATCAATGCCCGT
AAATGAGAGGAAAAAGTATAAGTTATAACTAGCCAATATATCCAGCTTTG
ACCTACTTAGACAATATTTCTTTCAATGAAATCTTGCTCATCGAAGATAA
AAACATCTTGAAGTATCTTGTCACTGCCACCAACTTTTTGTATCTGCCTC
GGAAGTGAAGGCTCCTAGGATCAAAATAAGNATAAGAGTATGGACAGGTG
ATAAAAAAATACATAGTTGGATTCACCGGCAACCTCCTTCATCCAAGAAA
TGTGTTTATTCTAAAGTAAATCGTTGTATAAGGCCCATTGCTTGATATAT
AAAACTGTGTTTTGTTCCTCAAAACGACAATATTATAGACCAGATATACT
GACGTCGTGGATCCCCAAGATCCTCTCATTTCATGAGACGGTGCATTATT
CAATATCCTAGTTTACCAGGATACATTGAATTTTTACAAATTTCGAACAT
TTTGGCATTGGCGTCCACAGCATATCTGAGATCTAATTGTGGATTTCGTT
TGGCATCTAAAAAATGAGTTTATATAATATTTGAAAACTTTTTTTTTGTT
GGGTAAACTCTGAAAAATAACAGCCGAATATTAAATTATAATATTAATTT
AGGGAATCTCTAAAAAATAATTGATAAAAGTGTGTCATAATTAAATTTAC
ACCCGGTATTGATAAAATTCGTACATATACTTTTTCTAAATCTTTCCTTT
TGTTAATTAGGGCAGGAGCGATATGCCTACGTTTCGAATGAATTATTTGA
GTTATTTGAAACTCTTGTCTGACGAAAGGGACTACTACTCCAAAAATGTT
CATAAAATCCAACTTCCTTGCGTTCCCATTCCTGAACCTCTTCCACCTGA
CCCTGAAATCCTCAATCAGAGAAGACAAGTGATCGCAAAGAGATTAATTG
AAATCAATGCCCGTAAATGAGAGGAAAAAGTATAAGTTATAACTAGCCAA
TATATCCAGCTTTGACCTACTTACACAATATTTCTTTCAATGAAATCTTG
CTCATCGAAGATAAAAACATATTGAAGTATCTTGTCACTATCACCAACTT
TTTGTATCTGCCTCTGAAGTGAAGGCTCCTACGATCAAAATAAGAAGTAT
GATAGAGCGTGCAAAGATAGCAAAAAATAAAACTTTAAAGGAAGATGAGA
ACTGTGAGGAATTGCTGGACCCCTGCTGCTCCGAGCTCAAAAACAGAAGA
GGAGATATGTGCGAGACTGAGAAACCCGAGCTTGATGCTTGGTTGGGTGA
TATCAAGCAAAAAAGGTTTGATAGTTCACAAAAATTATTAATTACCACTA
CAAAGGTACAATTTTAGAAAGGGAATCCTTGATAAAAGAGGCGCAAGGCA
ACTGCGAAAACAGCAGCTAGCAAAATGAAGAACAGTGCATGATATTGACG
TCTCAGTTGGCCAACTCCTCCAAGAAGGATGATAACTTTGGYATGCTATG
AAGATTTAGACGTCTATAAAAAAATAACAAAGTAAANTACCATTTATGAA
TTTAGAAGGAATTTTGTCCCTTAATTAATAATTATTCCTCCTTCTATTTG
TCTTAGGACATTGTGGACTCTGATAGTGATGAAGAACAAGAGAAACTTGT
GGAATACGAATAGGTTTTAAGAGAACATAGCCCTCACTTTAGTATACCAG
AGGAGCAGGAAATAACAATTGACTCCATGGAGTGGTATCAATTACACTAA
TCCACTAATCGAGTTTGCACACCAGAAATCCTTTTCCATGTCATTAATAT
ATTGAGTAACATCTATGATTTGTAAGTTAAAAATAAATTGAAACAAAAAA
TAAACTATATTTAAACAATTTACATAATTATCCAAACATACTGTTATTAC
AGGCCTCAATTATTGGAAATGAACCAGGAGGTATCTCTGAGAGTCTGGAG
TTCATTCAGAGCAAATTTGGTCCAAAGTTACAAGACAAAWTAGTGAACAA
NTATTTTTGTAACTGGCTCTTTAGTACTCCTTCCTTGAAAAAGGAATTGA
TTATTTTAAGGAGTATTCTCTATCAAATTACATTGTACAAAGGCCACCCA
GGCCGTGGAGAAAAATGACGATACGACGACGGCACGTGATCAATAAAGAC
ATAAGATGAATGATATAGCACATTTTGTCATTTGATTTTGGCCATTTTGG
GGACCTAAACAACCAAGTTTTATAACTATAAAACTCTTTTTGCATTAATA
TTAAGAAAATAGTAAACTATTGATTATCAAAATGGGATCAACTCGTGATA
GATTTGTGATTACAACTGTTCATAAAAAAAATATCTCTCTATTATCTAGT
TTTATAACATATCAGTGATATCAGATATATTAATTAGTTTTTTTAGAAAT
CTAGCTTTTTTAGGAATTTTCATACCGAGTTGTTCATTTATGACTGAACA
CTTTGAATATTAAACTTCAGCAAGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTACAAGATGTATTCTTCAATCAWGGCGTCCCAGTGTAGGCTGACA
GTGGATATGAAGGCATCTGCGTTTAAATGACGGACACMGCAGGCCTTCCC
TTCGATATGCACCCMAATGGTGTAGTCGAGGGAGTTGGCATCAAGGTTGT
AGGGGGGGGGGAGGGGGCAAAAGTGACCTCTCCACCCTCACAAGGTTCTT
TCCTTTTCMACTTGTACGTAAGCTAAAGAGCTKAATTAAATTAATTACAT
CCTTCTTAATTCATGAATTGGGGATATGAGTAAGCGATACAGTCTTTATT
AAGTATCCTATGCCTTTATGTTCGGGAACTAACATATAAATACATAATGA
TCGTTATGAATTAATTACATTATTATTCAATGATTAATGGAGGATATATG
TTATATTATTTGAATGAAACTTACCACGCAATCTTTTTACAAACCCGKTC
TTTATTTTAAAAGGGAAAATTCANGGCAAACTGCCTAACACCCGCTGCGG
ATGTATTCTTCAATCAAGTATCCTATGCATTTATGTTCGGGAACTAACAT
ATAAATACATAATGATCGTTATGAATTAATTACATTATTATTCAATGATT
AATGGAGGATATATGTTATATTATTTGAATGAAACTTACCACGCAATCTT
TTTACAAACCCGATCTTTATTTTAAAAGGGAAAATTRATCATTTTAAATG
ATTAGTTTAATTATTGATTCTTTTAAAGTTTACTTTATAAAGCCTTGTAA
CATGTATCAAGGTCTACATACTTTAATTTTGAGTTCCATAAATTAAGTCA
ATCTATCATTTTATTGCTCAAAAACAATGTTTTAGGATTTCAAATATTAT
CCCAAAGTGAAAGAGTTGCTTAAAATGNCCCCATGATGTTAATATAAAAT
TACAACTACGTCAAATAATATATCTTTATAACGGTACAAAGTTCATATGA
GTTTACCAACTCCAATTTATCATTAAAAAAGATTGGCTCTGGTGTCGCAT
TCCCTTCATTTGTTASTCGCCGATATCTACAGTTGTTTAACAGGATTTAA
TAGAGTTTTTTACGTTACGTCACAATTTTAATTTTGTCCCTTTTGGGGCC
TAAAAATTGAAAAATCCATGGCCTAAACAACCAAGTTTTGTGAGAATGAA
AACCTTTTTTCATTAATATTAAAGAAAATTGTTAACTTTGGGATGTCAAA
ATAGGACGAACAGATTGAAGCACTTAAACCTTACATTCTATGAAAAATAC
ATCCCTCTATGGTCTAGTTTTATTAGATATCTGACCCTTAAATGTATTAA
AAATTAACTTTTAATGAAAAGAATAAGATATTTTTCTCCAACTATTCAAC
TTTTCTCGTCCTTAGTCGATCCAAAAGCAACAAAAAAAAAGTACAAATCT
AGATATTTGTAGGGATTTTTAGTACATATTAGTATAATTCAAARATAACT
GTTTANTATGAATGAGAAATCCATGCTGTTTATCATTGGCATCAAGTAAT
ATTCAATGTAAGTGAATAACGCCATTTAATGGAGTTCCAATAAGATTGAT
TGGGAATTTGTCCATTTTATCATATGTAGTAAAAATATCAACTTCGATCC
CCCAAGTTGGCGTCTCCTTCAATTATGATGCAATTTATGAAGTCAGTAAA
AATACACTAATGGATTTCTATAAATTCAAAATATTAATATTATGACGAAT
ATCATTGTCAATGATTCATTGATCAACGTTCATAATAGAGTATTTTCACT
TAAATCATAGATTGCATCATAATTTCTAGAGATGCAATTTTTGAAGGCTT
AAAGTTGACATTTTTATCACATAATATGAACAAATTTCTAATAAATCTTC
ATGAAACTTCTATAAAAGACTTTAAGAACTTAAAACTATAAAGACTTATC
TGGATTAAATACTTCTTGAAGCTAATGATTAAACACTGATAGGTATTTGA
ATATATTCAAAGTAATATTTACTGAAAGTCCTTAAAAATGTATATTTTTG
AAAATCTGTCTAGGACAAGAAAAGTAGGATAGTAAGAGAAAAATATCGTA
ATATTTCCATTATAGTTGTTAATTTTTATCTGGTATATGGAATTAAGATT
GTGTAATTATGTAATAACATACTTTTAATATAAATTAGGATCCGATATAT
AATAAAACTAAACATTGAAGGTATATATATTTCATATTCGATAGACASAA
AGGTTTAAGTRCTMTTATTTTTGGTCCCATTTTGACATCCAATAGTTCAA
TATTTTTTTTTNCATGAATGAGAAATCCATGCTGTTTATCATTGGCATCA
AGTAATATTCAATGTAAGTGAATAAAMCCATTTAATGGAGTTCCAATAAG
ATTGATTGGGAATTTGTCCATTTTATCATATGTAGTAAAAATATCAACTT
CGATCCCCCAAGTTGGCGTCTCCTTCAATTATGATGCAATTTATGACGTC
AGTAAAAATACACTAATGGATTTCTATAAATTCAAAATATTAATATTATG
ACAAATATCATACGTTCAACGTTCATAATAGAGTATTTTCACTTAAATCA
TAGATTGCATCATAATTTCTAGAGATGCAATTTTGGAAGGCTTAAAGTTG
ACATTTTTATCACATAATATGAACAAATTTCTAATAAATCTTCATGAAAC
TTCTATAAAAGACTTTAAGAACTTAAAACTATAAAGACTTATCTGGATTA
AATACTACTTGAAGCTAATGATTAAACACTGATAGGTATTTGAACATATT
CAAAGTAATATTTACTGAAAGTCCTTAAAAATGTATATTTTTTTAAATCT
GTCTAGGACAAGAAAAGTAGGATAATAAGAGAAAAATATCGTAATATTTC
CATTATAATTGTTAATTTTTATCTGGTATATGGAATTAAGATTGTGTAAT
TATGTAATAACATACTTTTAATATAAATTAGGATCCGATATATAATAAAA
CTAAACATTGAAGGCATATATATTTCATATTCGATAGACAGAAAGGTTTA
AGTCCTTTTATTATTGGTCCCATTTTGACATCCAATAGTTCAATATTTTT
TRTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNATTATATTATATGATATAATTTATATCATGATTC
ATGAATGATCCCTCAAAAATTGATCACTTTGACCTTCTTTCTTTTTTTTG
GGGGGGGGGGGAATGTTCATTTATTTTTCTAATATGGTATGAAATAAATA
TAGAAAATTTGGGTTCTAGTTAGGTTACACTAGAGCTTTTGATGATTATT
TGAAGATATTTTTTTGAGGGAAAATCTACCTGCCAAAATCCTTATCCATT
AGGCTCTCTCTATGGAGGTAAAATATATATATGATGAAATTGGAAAAAAA
TGGAAAAATTAATTTTTTGGATTTTAAAAAAAAAAATCCATACCAATTCT
CAAAGAATTAATTTTTTTGGAAAAATTAATTCAAAATCCCCAGCTGTTCA
GAAAAAATTTTTAGATATTAAATTTTCTATTAAAAAGCAAAAATYCCTTA
ATTTGGGGGTGGGCGAAAGCCGCTCGAGCCCACCTCCTGCGGACTCCCCT
GTTAAGTGTCGGTTTAAAGACAAATTTTACATCAATAATATAGAAGATAA
CTTTAAAAGAAATCCTTAGTGTTACTCTCCGTTTTTGATGAGAACACTCC
CACGCAAGTACTCAATACTTATATTAATTCATGTGTTCTCCCCTCAAGAA
TGAAATAATAATAATAAGGGATAGACAAAAAATAAATAAATGATTGTATG
AACTGATGAGTACTTAGTCTCCAGAGTGCGCACTAACAAAAACCAATTAT
GCTACATACAAATTACRTGCGWGAGTTAATTTCTTTTTACATAACAATCC
CTATATTTTATTGAAATCTTAACATATACTGTCAATCCAAATTAATTATG
ATATATGATATACATCAGAGAAAAATTACAAAGCAAACAAAAACCCCTTG
TATACATGCATACGATTACATTGTTATTTATTGGCAAAAATATGTATATC
ATATACKTCAGGGAGCACTATATATAGTGGGGGGGGGGTATACCCCCTAT
TTYCAAACACTGCAATATTTTGTTAATAAGANNGATATACATCAGAGAAA
AATTACAAAGCAAACAAAAACCCCTTGTATACATGCATACGATTACATTG
TTATTTATTGGCTAAAATATGTTCTTCATATACATCAAGGACGCTATATA
TAGTGGGGGGGGGTATACCCCCTATTTGCAAACACTGCAATATTTTGTTA
ATAAGACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAA
TTTGAGTTTTGATKACTGAATAATATTGGGAATTCAGAATTCTAAATTAA
CATTTGATAAACTCTGACTTAAGTGTTTAATTATTATAATTAGTTGACGT
ATTCCATGTTGATAAGGAGATATTAATAGAATAGAAGTTATTAATAGTTC
ATACTAGAGAGAAGATTGAAAATGGCGTCAAAAAATACGTTGTTTCACGA
TGAGTACGCGCCGTTCTCCTTGTTCACTCACCCCTCCGATGCGTCTCCCA
TCGTMTTTACAATGAATGAAGGTCCAGAATACTACCGATTGCAAGAAATG
ATCGAAAAAGGTGGAGGCCTCTTGGAAAAAGCTAGTAAATTTGACGAAAC
CCATAAAAGGATCCGGATCCATGATAAGAAAATGATTAACCTTGAAAAAG
AYGTGGATAATTTTGACATGACTTACATCCTGGACTGTGTCAAGGGTAAG
TTCCGAACTCCACTTGCATTTTTGTCCTCAATCCTGGAGTTATATAACTT
AATTATTAATGAATACATGTCTGATTTCTATCATTTTTTACAGAGAACAA
TCTACGCAACGATCTCTGCAATTATCGACTTGGAGTCTCTCTTTTCGAGG
AATACGACCCTTACGACATTCTAATTGGCGAAAAGACTTGGATTGATCTT
AAGAAACGAAAAAATATCGAAGAGGAATACATGGAATTAGATAACTTTGA
CAAAGCTCTCCTCACTCCCTCTGCTAATTCCAAAAATCGTAAAAGTAATT
CTTATGATGGACAAGTTCATATACTCAAATACATCATAACTCATGGAAAA
TACAATTCACTTAAAGATATCAACACTTGGAGAAGAATGAAAGTTGGTGG
AGTATGTTCAGGATTGAGAACAGCCATTTCTTTAAAAGAGCATTTTAGAA
AACAAATCCTCCCTCACATCAATATTAAAACATACCCCCAATTTAGTGAA
GAGGATTTGAATAAAATTCTTAGAGGTTGGAAAGGCTCTAAGACTTCGTT
TAATGTTGAGGTTTTAGAAAGAAGTTCTAGGCTTAAACAAAACGTTCCTT
GTTCTGATGATGCTGCAATGCATAAACAGGCCAATGTGAAAATCGAAAAC
TCTGTTGGACCTCTTCAAAAAAGTTCTCGAAAGCTGATTAACAAGGATAA
AACTCACTTTGATGAATCGTTTGGAATAATCAACAAAAAAGAAGAAGTAA
CTGCTATGCCATCATATAAGCGGATAAAGATATGTAATTTGAATAAACTT
GAAGCTTCATCCACTCCTATACANNNNNNAATCTCAAGATCGCAATACTC
TATGGTTATCCCAAACTGATGCTTTGAAATCAAAGGAGCACGAAGCCTTT
AGTAAAACTTGTATGTTGCAGAGTCTTAATTATTCGTCTCAAACAAAGTT
TTTAGCTACATGGAACCCCAGACAAAAAGATGGTAGTAAAGAACCCGAAA
AAAAAGAGCGTTCTTCAGACAGTTATTCTTTATCTAAATGTAATAATTCC
TGGTATACGAATGATCCAAGTAACAAAAAGGGGGGCAATTCAAGGAATGG
TGGAAATACGGTACCCCCTAAATCTTTAACAAAAAATGAAAGTAAATTAT
TGAAGAGCTTTCCAAATAGTCCAAATTTAATGATAAATAACRTCAAATAC
TCAAGTTTGGTAAATTTTCTGGAACACAATGGGAGAATGAATAAAGTTCA
AAATGAATCAGAAGGAAGGTCTCAAATTTTCATAATGAAACATTAAAGTT
CTATGATCTGGAATGCCAATGAATGATAGTTTTGTAGAAAGATTGCTAAA
ATTGATGTTTTATGAAATAGTTTATTAAGCAGTGACTCTTAACTTTTTTT
TATTGTACTCAACTTCAGAATAGCAATGTTGGAAATATATGTTAACTTAT
TGTACAATACCTTCTTTGTATCTGGTTTTC
back to top
Add to Basket