EMLSAG00000005344, EMLSAG00000005344-688110 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000005344 vs. GO
Match: - (symbol:tim "timeless" species:7227 "Drosophila melanogaster" [GO:0071482 "cellular response to light stimulus" evidence=IMP] [GO:0007623 "circadian rhythm" evidence=NAS;TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IPI] [GO:0005737 "cytoplasm" evidence=NAS;IDA] [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=NAS;IDA;TAS] [GO:0008134 "transcription factor binding" evidence=IPI] [GO:0046982 "protein heterodimerization activity" evidence=NAS;TAS;IPI] [GO:2000678 "negative regulation of transcription regulatory region DNA binding" evidence=IDA] [GO:0048512 "circadian behavior" evidence=IMP] [GO:0007617 "mating behavior" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;NAS;TAS] [GO:0045475 "locomotor rhythm" evidence=IGI;NAS] [GO:0008062 "eclosion rhythm" evidence=NAS;TAS] [GO:0030431 "sleep" evidence=NAS] [GO:0045187 "regulation of circadian sleep/wake cycle, sleep" evidence=IMP;TAS] [GO:0006606 "protein import into nucleus" evidence=NAS] [GO:0007622 "rhythmic behavior" evidence=TAS] [GO:0007620 "copulation" evidence=IMP] [GO:0009649 "entrainment of circadian clock" evidence=TAS] [GO:0042306 "regulation of protein import into nucleus" evidence=TAS] [GO:0042749 "regulation of circadian sleep/wake cycle" evidence=IMP] [GO:0009648 "photoperiodism" evidence=IMP] [GO:0046957 "negative phototaxis" evidence=IMP] [GO:0060086 "circadian temperature homeostasis" evidence=IMP] GO:GO:0005634 GO:GO:0005737 GO:GO:0048471 GO:GO:0043234 EMBL:AE014134 GO:GO:0045187 GO:GO:0030431 GO:GO:0009649 GO:GO:0007617 GO:GO:0000122 GO:GO:0006606 GO:GO:0046982 GO:GO:0045475 GO:GO:0009648 GO:GO:0042306 GO:GO:0071482 GO:GO:0008062 GO:GO:0007620 GO:GO:2000678 GO:GO:0060086 InterPro:IPR006906 Pfam:PF04821 EMBL:U37018 EMBL:AF032401 EMBL:AF032400 EMBL:Y09930 EMBL:Y09931 EMBL:Y09932 EMBL:Y09933 EMBL:Y09934 EMBL:Y09935 EMBL:AY058278 EMBL:BT001424 EMBL:AF038501 PIR:A57655 RefSeq:NP_001188687.2 RefSeq:NP_722912.3 RefSeq:NP_722913.3 RefSeq:NP_722914.3 UniGene:Dm.2663 ProteinModelPortal:P49021 BioGrid:59781 DIP:DIP-29425N MINT:MINT-344208 GeneID:33571 KEGG:dme:Dmel_CG3234 UCSC:CG3234-RA CTD:107698 FlyBase:FBgn0014396 eggNOG:NOG257888 InParanoid:P49021 KO:K12074 OrthoDB:EOG7SXW2F ChiTaRS:ARHGEF5 GenomeRNAi:33571 NextBio:784249 Bgee:P49021 GO:GO:0046957 Uniprot:P49021) HSP 1 Score: 73.559 bits (179), Expect = 1.431e-13 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 526 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 666
BLAST of EMLSAG00000005344 vs. C. finmarchicus
Match: gi|592759188|gb|GAXK01195225.1| (TSA: Calanus finmarchicus comp88114_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 8.188e-10 Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 109 VSASEKREIQRNKIMKIMYNSIKKRREQSMVD----DEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVEL 205 ++ EK+E R K++K + + R ++MV+ D+D+S LL EFT+ F+ GY L++ L KL K+ + S FLWL+T+F++F LE+ L Sbjct: 2654 LTPVEKKEKHRLKLLK--RSKENRMRVKAMVNHIPTDKDISELLKEFTVDFLHNGYSGLVKELLEKL--SKNDTDITMDKSHFLWLLTYFLKFASQLEIGL 2944
BLAST of EMLSAG00000005344 vs. C. finmarchicus
Match: gi|592919804|gb|GAXK01038571.1| (TSA: Calanus finmarchicus comp4317398_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 3.940e-2 Identity = 19/62 (30.65%), Postives = 31/62 (50.00%), Query Frame = 0 Query: 82 CEVSTGSSSNDNDQSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRREQSMVDDED 143 C + T S DND ++ K GP++ + R +Q N MKI + + KR S+ D++ Sbjct: 69 CCIQTEQESQDNDLNL---KVPGFGPNIKPFKPRSVQHNLNMKIPFYRLFKRFPNSLATDKE 245
BLAST of EMLSAG00000005344 vs. C. finmarchicus
Match: gi|592863079|gb|GAXK01094483.1| (TSA: Calanus finmarchicus comp48018_c2_seq2 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.334e+0 Identity = 18/54 (33.33%), Postives = 28/54 (51.85%), Query Frame = 0 Query: 144 VSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRF 197 V L EF + F++ Y L+ +R L QK+ + + +LW I FFM+F Sbjct: 4215 VRIFLKEFCVEFLLSAYNQLMGVVRDALNRQKAQQ---NDETYYLWCIRFFMQF 4367
BLAST of EMLSAG00000005344 vs. C. finmarchicus
Match: gi|592863080|gb|GAXK01094482.1| (TSA: Calanus finmarchicus comp48018_c2_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.339e+0 Identity = 18/54 (33.33%), Postives = 28/54 (51.85%), Query Frame = 0 Query: 144 VSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRF 197 V L EF + F++ Y L+ +R L QK+ + + +LW I FFM+F Sbjct: 4215 VRIFLKEFCVEFLLSAYNQLMGVVRDALNRQKAQQ---NDETYYLWCIRFFMQF 4367
BLAST of EMLSAG00000005344 vs. C. finmarchicus
Match: gi|592804299|gb|GAXK01150269.1| (TSA: Calanus finmarchicus comp8271824_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 1.372e+0 Identity = 18/39 (46.15%), Postives = 23/39 (58.97%), Query Frame = 0 Query: 84 VSTGSSSNDNDQSVPTNKRKTIGPDVSASEKREIQRNKI 122 STGSS + QS PT+ + G VSAS KRE R ++ Sbjct: 28 ASTGSSCSAPTQSRPTSASRLKG-AVSASRKREAMRRRM 141
BLAST of EMLSAG00000005344 vs. L. salmonis peptides
Match: EMLSAP00000005344 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2880:441:1295:1 gene:EMLSAG00000005344 transcript:EMLSAT00000005344 description:"maker-LSalAtl2s2880-augustus-gene-0.4") HSP 1 Score: 433.335 bits (1113), Expect = 8.589e-156 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 Query: 1 MNYFNYIYSKLDAKNPKNYNDDAMACQSSXSDLKEPLFKKMCGHNKPSNSMNKTSSVQLEETVKEMVNYWISALPGDTKIDCEVSTGSSSNDNDQSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIEY 210 MNYFNYIYSKLDAKNPKNYNDDAMACQSSXSDLKEPLFKKMCGHNKPSNSMNKTSSVQLEETVKEMVNYWISALPGDTKIDCEVSTGSSSNDNDQSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIEY Sbjct: 1 MNYFNYIYSKLDAKNPKNYNDDAMACQSSXSDLKEPLFKKMCGHNKPSNSMNKTSSVQLEETVKEMVNYWISALPGDTKIDCEVSTGSSSNDNDQSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIEY 210
BLAST of EMLSAG00000005344 vs. L. salmonis peptides
Match: EMLSAP00000009504 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6125:34:2816:-1 gene:EMLSAG00000009504 transcript:EMLSAT00000009504 description:"maker-LSalAtl2s6125-augustus-gene-0.2") HSP 1 Score: 273.863 bits (699), Expect = 2.218e-90 Identity = 134/172 (77.91%), Postives = 150/172 (87.21%), Query Frame = 0 Query: 40 KMCGHNKPSNSMNKTSSVQLEETVKEMVNYWISALPGDTKIDCEVSTGSSSNDNDQ--SVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 KMCGHNK S S+NKTSS +LEETVKEMVNYWI+ LPGDTK+D EVST SSSNDNDQ SVP NKR IGPDVSASEKREI+R KI+K++ + +KKRREQS VDDE VSRLLTEFTICFIMRGYGN+I NLRLKLMT+ +STF +M+SRFLWLITFFM FV+ LEVELPVIE Sbjct: 93 KMCGHNKHSTSINKTSSAELEETVKEMVNYWITTLPGDTKMDTEVSTESSSNDNDQCTSVPQNKRIPIGPDVSASEKREIRRKKILKMVNDLMKKRREQSTVDDEGVSRLLTEFTICFIMRGYGNIIGNLRLKLMTEPPTSTFTNMHSRFLWLITFFMSFVEDLEVELPVIE 264
BLAST of EMLSAG00000005344 vs. L. salmonis peptides
Match: EMLSAP00000007866 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4623:1701:4826:-1 gene:EMLSAG00000007866 transcript:EMLSAT00000007866 description:"maker-LSalAtl2s4623-augustus-gene-0.5") HSP 1 Score: 264.233 bits (674), Expect = 2.246e-84 Identity = 131/159 (82.39%), Postives = 142/159 (89.31%), Query Frame = 0 Query: 51 MNKTSSVQLEETVKEMVNYWISALPGDTKIDCEVSTGSSSNDNDQSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 MNKTSS +LEETVKEMVN WI+ LPGDTK+D EVST SSSNDNDQS + R IGP VSASEKREI+RNKI+KI+YNS+KKR EQS VDD+DVSRLLTEFTICFIMRGYGNLI NLRLKLMT+K SSTFA+MNSRFLWLITFFMRFVD LEVELPVIE Sbjct: 1 MNKTSSTELEETVKEMVNNWITTLPGDTKMDPEVSTXSSSNDNDQSTSVSIRIPIGPHVSASEKREIRRNKILKIVYNSMKKRGEQSTVDDDDVSRLLTEFTICFIMRGYGNLIGNLRLKLMTEKPSSTFANMNSRFLWLITFFMRFVDSLEVELPVIE 159
BLAST of EMLSAG00000005344 vs. L. salmonis peptides
Match: EMLSAP00000000186 (pep:novel supercontig:LSalAtl2s:LSalAtl2s10297:87:1441:1 gene:EMLSAG00000000186 transcript:EMLSAT00000000186 description:"maker-LSalAtl2s10297-snap-gene-0.4") HSP 1 Score: 129.413 bits (324), Expect = 2.062e-35 Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 0 Query: 126 MYNSIKKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 MYNS KK REQSMVDDEDVS LLTEFTI F++ GYGNLIQNLRLKLMT+K STF ++SRFLWLITFFM FV+ LEVEL IE Sbjct: 1 MYNSRKKHREQSMVDDEDVSXLLTEFTISFVICGYGNLIQNLRLKLMTEKPPSTFTVLHSRFLWLITFFMSFVEDLEVELREIE 84
BLAST of EMLSAG00000005344 vs. L. salmonis peptides
Match: EMLSAP00000003041 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1729:42835:43410:1 gene:EMLSAG00000003041 transcript:EMLSAT00000003041 description:"maker-LSalAtl2s1729-augustus-gene-0.6") HSP 1 Score: 90.1225 bits (222), Expect = 6.890e-23 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 0 Query: 41 MCGHNKPSNSMNKTSSVQLEETVKEMVNYWISALPGDTKIDCEV--STGSSSNDNDQSVPTNKRKTIGPDV-SASEKREIQRNKIMKIMYNSIKKRREQ 136 MC KPS SMNKT+ L+ TV+++V YW++A G+TK D EV + S +D SVP NK + IGPD SASE +EI++ KI+KIMYNS KK REQ Sbjct: 1 MCDDCKPSTSMNKTTRTNLKNTVRDIVTYWVAAPSGNTKKDSEVSTESSSDDDDQSTSVPQNKNQPIGPDASSASEIKEIRKKKILKIMYNSRKKHREQ 99
BLAST of EMLSAG00000005344 vs. SwissProt
Match: gi|635377428|sp|P49021.3|TIM_DROME (RecName: Full=Protein timeless) HSP 1 Score: 73.559 bits (179), Expect = 4.861e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 643
BLAST of EMLSAG00000005344 vs. SwissProt
Match: gi|6094484|sp|O44431.1|TIM_DROHY (RecName: Full=Protein timeless, partial [Drosophila hydei]) HSP 1 Score: 68.5514 bits (166), Expect = 1.880e-12 Identity = 46/147 (31.29%), Postives = 82/147 (55.78%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ S +SSND+D + P NK++T+ +S +K+E++R K++K +S+ K Q + D+S LL EFT+ F+++GY L++ L +L+T S+ D S F WL+TFF++ LE+++ I+ Sbjct: 341 TQVENPESISTSSNDDDGPQGKPQHQKPPCNTKPRNKQRTL---MSPQDKKELRRKKLVKRSKSSLINMKGLVQHTPTNYDISNLLKEFTVDFLLKGYNYLVEELLKQLLT--SAKVLID-TSHFFWLVTFFLKLAAQLELDMEHID 481
BLAST of EMLSAG00000005344 vs. SwissProt
Match: gi|6175064|sp|O17482.1|TIM_DROVI (RecName: Full=Protein timeless) HSP 1 Score: 62.3882 bits (150), Expect = 2.675e-10 Identity = 41/146 (28.08%), Postives = 79/146 (54.11%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDNDQSVPTNKRKTIGPDVSASEK------------REIQRNKIMKIMYNSIKKRREQSM--VDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ S +SSND+D P K + P S+ + ++++R K++K +S+ + + +D+D+S LL EFT+ F+++GY L++ L +L+ S++ S F WL+TFF++F LE+++ I+ Sbjct: 470 TQMENPESISTSSNDDDG--PQGKPQHQKPPCSSKHRSKQRIFAVPQDTKDLRRKKLVKRSKSSLINMKGLVLHTPNDDDISNLLKEFTVDFLLKGYNYLVEELHSQLL---SNAKMPIDTSHFFWLVTFFLKFAAQLELDMEHID 610
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: API64979.1 (timeless, isoform T [Drosophila melanogaster]) HSP 1 Score: 73.559 bits (179), Expect = 2.294e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 526 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 666
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: ACL82988.2 (timeless, isoform O [Drosophila melanogaster]) HSP 1 Score: 73.559 bits (179), Expect = 2.295e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 643
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: AAN10371.3 (timeless, isoform P [Drosophila melanogaster]) HSP 1 Score: 73.559 bits (179), Expect = 2.356e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 643
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: AAF51098.4 (timeless, isoform B [Drosophila melanogaster]) HSP 1 Score: 73.559 bits (179), Expect = 2.356e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 643
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: ACL82987.2 (timeless, isoform R [Drosophila melanogaster]) HSP 1 Score: 73.559 bits (179), Expect = 2.395e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 471 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 611
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: ABC65862.2 (timeless, isoform M [Drosophila melanogaster]) HSP 1 Score: 73.1738 bits (178), Expect = 2.749e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 643
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: AAN10372.3 (timeless, isoform L [Drosophila melanogaster]) HSP 1 Score: 73.1738 bits (178), Expect = 2.876e-14 Identity = 46/147 (31.29%), Postives = 83/147 (56.46%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S+ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL----SNAVPIDTSHFFWLVTYFLKFAAQLELDMEHID 642
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: ADV36936.2 (timeless, isoform N [Drosophila melanogaster]) HSP 1 Score: 73.1738 bits (178), Expect = 3.023e-14 Identity = 46/147 (31.29%), Postives = 83/147 (56.46%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S+ S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL----SNAVPIDTSHFFWLVTYFLKFAAQLELDMEHID 642
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: AAX52649.2 (timeless, isoform S [Drosophila melanogaster]) HSP 1 Score: 73.1738 bits (178), Expect = 3.158e-14 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 471 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 611
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Match: EDO63569.1 (AGAP008288-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 68.9366 bits (167), Expect = 9.082e-13 Identity = 43/137 (31.39%), Postives = 74/137 (54.01%), Query Frame = 0 Query: 85 STGSSSNDND--------QSVPTNKRKTIGP------DVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVEL 205 S +SSN++D Q P+N+++ VS EK+E++R K++K ++I K + D+D+S +L EFT+ F+++GYG L+ L +L+ S S F WL+T+F++F LE++L Sbjct: 477 SISTSSNEDDSPHQKPVHQKPPSNQKQRFNAANKQRNPVSVQEKKELRRKKLVKRGKSNIINMKGLMHHVPTDDDISHILKEFTVDFLLKGYGYLVHELHTQLL---SDLQVQIDTSHFFWLVTYFLKFATQLELDL 610
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1036932078|ref|XP_016982814.1| (PREDICTED: protein timeless isoform X2 [Drosophila rhopaloa] >gi|1036932096|ref|XP_016982815.1| PREDICTED: protein timeless isoform X2 [Drosophila rhopaloa]) HSP 1 Score: 77.0258 bits (188), Expect = 7.369e-13 Identity = 47/147 (31.97%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L++ S D S F WL+T+F++F LE+++ I+ Sbjct: 494 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYNYLVEELHMQLLSNASKKVPID-TSHFFWLVTYFLKFAAQLELDMEHID 636
BLAST of EMLSAG00000005344 vs. nr
Match: gi|668454390|gb|KFB42853.1| (AGAP008288-PA-like protein [Anopheles sinensis]) HSP 1 Score: 76.6406 bits (187), Expect = 1.080e-12 Identity = 45/137 (32.85%), Postives = 78/137 (56.93%), Query Frame = 0 Query: 85 STGSSSNDND--------QSVPTNKRKTIGP------DVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVEL 205 S +SSN++D Q PTN+++ VSA EK+E++R K++K ++I K + D+D+S +L EFT+ F+++GYG+L++ L ++L+ S S F WL+T+F++F LE++L Sbjct: 516 SISTSSNEDDCPHHKPVHQKPPTNQKQRFNAANKQRNPVSAQEKKELRRKKLVKRAKSNIITMKGLMHHVPSDDDISHILKEFTVDFLLKGYGHLVEELHMQLL---SDLQIQIDTSHFFWLVTYFLKFATQLELDL 649
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1013899764|ref|XP_016023297.1| (tim, isoform D [Drosophila simulans] >gi|1013899766|ref|XP_016023298.1| tim, isoform E [Drosophila simulans] >gi|1013899768|ref|XP_016023299.1| tim, isoform F [Drosophila simulans] >gi|900885211|gb|KMY87904.1| tim, isoform D [Drosophila simulans] >gi|900885212|gb|KMY87905.1| tim, isoform E [Drosophila simulans] >gi|900885213|gb|KMY87906.1| tim, isoform F [Drosophila simulans]) HSP 1 Score: 75.8702 bits (185), Expect = 2.004e-12 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L++ + D S F WL+T+F++F LE+++ I+ Sbjct: 503 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLLSNANKKVPID-TSHFFWLVTYFLKFAAQLELDMEHID 645
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1036038257|ref|XP_016942705.1| (PREDICTED: protein timeless isoform X1 [Drosophila suzukii]) HSP 1 Score: 75.485 bits (184), Expect = 2.045e-12 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L++ + D S F WL+T+F++F LE+++ I+ Sbjct: 405 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLLSNANKKVPID-TSHFFWLVTYFLKFAAQLELDMEHID 547
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1036890169|ref|XP_017047586.1| (PREDICTED: protein timeless isoform X1 [Drosophila ficusphila] >gi|1036890186|ref|XP_017047587.1| PREDICTED: protein timeless isoform X1 [Drosophila ficusphila] >gi|1036890205|ref|XP_017047588.1| PREDICTED: protein timeless isoform X1 [Drosophila ficusphila] >gi|1036890224|ref|XP_017047589.1| PREDICTED: protein timeless isoform X1 [Drosophila ficusphila]) HSP 1 Score: 75.485 bits (184), Expect = 2.666e-12 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L++ + D S F WL+T+F++F LE+++ I+ Sbjct: 507 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYNYLVEELHMQLLSNANKKVPID-TSHFFWLVTYFLKFAAQLELDMEHID 649
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1092917138|gb|AOZ21499.1| (timeless, partial [Zaprionus indianus]) HSP 1 Score: 75.0998 bits (183), Expect = 2.954e-12 Identity = 46/147 (31.29%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK++T+ +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++LM S++ S F WL+T+F++F LE+++ I+ Sbjct: 532 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKQRTL---MSPQDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYNYLVEELHMQLM---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 672
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1036890262|ref|XP_017047591.1| (PREDICTED: protein timeless isoform X3 [Drosophila ficusphila]) HSP 1 Score: 75.0998 bits (183), Expect = 3.488e-12 Identity = 46/147 (31.29%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK +TI +S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L++ + D S F WL+T+F++F LE+++ I+ Sbjct: 507 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTI---MSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYNYLVEELHMQLLSNANKKVPID-TSHFFWLVTYFLKFAAQLELDMEHID 649
BLAST of EMLSAG00000005344 vs. nr
Match: gi|1036961350|ref|XP_017097932.1| (PREDICTED: protein timeless isoform X1 [Drosophila bipectinata] >gi|1036961366|ref|XP_017097933.1| PREDICTED: protein timeless isoform X1 [Drosophila bipectinata] >gi|1036961384|ref|XP_017097934.1| PREDICTED: protein timeless isoform X1 [Drosophila bipectinata]) HSP 1 Score: 75.0998 bits (183), Expect = 3.511e-12 Identity = 47/147 (31.97%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND-------------QSVPTNKRKTIGPDVSASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D + P NK++TI +S +K+E++R K++K +S+ K Q DED+S LL EFT+ F+++GY L++ L +L+ S++ S F WL+T+F++F LE+++ I+ Sbjct: 511 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKQRTI---MSPQDKKELRRKKLVKRSKSSLINMKGLVQHTPTDEDISNLLKEFTVDFLLKGYNYLVEELHQQLL---SNAKVPIDTSHFFWLVTYFLKFAAQLELDMEHID 651
BLAST of EMLSAG00000005344 vs. nr
Match: gi|952513591|gb|KRT80145.1| (hypothetical protein AMK59_8236, partial [Oryctes borbonicus]) HSP 1 Score: 74.7146 bits (182), Expect = 4.048e-12 Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDNDQSVPTNKRKTIGPDV--------------SASEKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVEL----PVIEY 210 T+++ + S +SSND+DQ P+ K P +A EK+E++R K++K +I K DED+S +L EFT+ F+++GYG+L+ +L +L+ S+ S F WL+T+F++F LE++L PV+ Y Sbjct: 89 TQVENQESISTSSNDDDQ--PSQKPVHQKPHTFQKSRYNTQKNRATTALEKKELRRKKLVKRSKTNIINMKGLMHHTPTDEDISNILKEFTVDFLLKGYGSLVHDLHSQLL---SNIHLKIDTSHFFWLVTYFLKFATQLELDLEHISPVLSY 236
BLAST of EMLSAG00000005344 vs. nr
Match: gi|969515613|ref|XP_002087836.2| (LOW QUALITY PROTEIN: tim [Drosophila yakuba] >gi|948550892|gb|EDW87548.2| LOW QUALITY PROTEIN: tim [Drosophila yakuba]) HSP 1 Score: 74.7146 bits (182), Expect = 4.466e-12 Identity = 45/144 (31.25%), Postives = 82/144 (56.94%), Query Frame = 0 Query: 78 TKIDCEVSTGSSSNDND--------QSVPTNKRKTIGPDVSAS--EKREIQRNKIMKIMYNSI--KKRREQSMVDDEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMNSRFLWLITFFMRFVDYLEVELPVIE 209 T+++ + S +SSND+D Q P N + P + S +K+E++R K++K +S+ K Q D+D+S LL EFT+ F+++GY L++ L ++L++ + D S F WL+T+F++F LE+++ I+ Sbjct: 526 TQVENQESISTSSNDDDGPQGKPQHQKPPCNTKPRNKPRTTMSPMDKKELRRKKLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLLSNANKKVPID-TSHFFWLVTYFLKFAAQLELDMEHID 668
BLAST of EMLSAG00000005344 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold744_size103476-snap-gene-0.11 (protein:Tk08089 transcript:maker-scaffold744_size103476-snap-gene-0.11-mRNA-1 annotation:"AGAP008288-PA") HSP 1 Score: 74.3294 bits (181), Expect = 1.009e-15 Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 0 Query: 83 EVSTGSSSNDNDQS------VPTN--KRKTIGPDVSASEKREIQRNKIMKIMYNSIKKRR--EQSMVD----DEDVSRLLTEFTICFIMRGYGNLIQNLRLKLMTQKSSSTFADMN-SRFLWLITFFMRFVDYLEVELPVI 208 E + +SSND+DQ TN K + P+ S +EKRE++R K++ N K R +S+V ++DV+ LL EFT+ F+++GY +L+ LR +L+ + A M+ S FLWL+T+F++F LEV + VI Sbjct: 174 ENGSSTSSNDDDQERKRKVKPHTNLQKPRPQKPNFSPAEKRELRRQKLI----NRAKSERMKVKSLVHHIPTEDDVADLLKEFTVDFLLKGYSSLVDELRKQLLNDFN----AQMDKSHFLWLVTYFLKFASQLEVGMEVI 306 The following BLAST results are available for this feature:
BLAST of EMLSAG00000005344 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000005344 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 5
BLAST of EMLSAG00000005344 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000005344 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 3
BLAST of EMLSAG00000005344 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 14
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BLAST of EMLSAG00000005344 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000005344 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s2880:441..1295+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000005344-688110 ID=EMLSAG00000005344-688110|Name=EMLSAG00000005344|organism=Lepeophtheirus salmonis|type=gene|length=855bp|location=Sequence derived from alignment at LSalAtl2s2880:441..1295+ (Lepeophtheirus salmonis)back to top Add to Basket
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