EMLSAG00000005614, EMLSAG00000005614-688380 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005614
Unique NameEMLSAG00000005614-688380
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000005614 vs. GO
Match: - (symbol:mRpL10 "39S ribosomal protein L10, mitochondrial" species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003735 "structural constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] InterPro:IPR001790 Pfam:PF00466 GO:GO:0006412 GO:GO:0042254 GO:GO:0005762 GO:GO:0003735 EMBL:CH379058 KO:K02864 eggNOG:NOG303354 OMA:VFPNQVL OrthoDB:EOG73RBCF RefSeq:XP_001357469.1 ProteinModelPortal:Q29NV5 STRING:7237.FBpp0278898 EnsemblMetazoa:FBtr0280460 GeneID:4817857 KEGG:dpo:Dpse_GA11028 FlyBase:FBgn0071084 InParanoid:Q29NV5 Uniprot:Q29NV5)

HSP 1 Score: 50.8322 bits (120), Expect = 3.746e-7
Identity = 27/117 (23.08%), Postives = 57/117 (48.72%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNL 117
            + LK Y R+     + GT +E  +    S   N  + F  + + +  L+K  ++ P+++L+G +    +L R +++  + +P++Q   +QL   L     Q + +L +  + L Q L
Sbjct:  119 LHLKSYGRKIIDQAVTGTPYEAIMPLFHS---NHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQMPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVL 232
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BLAST of EMLSAG00000005614 vs. GO
Match: - (symbol:mRpL10 "mitochondrial ribosomal protein L10" species:7227 "Drosophila melanogaster" [GO:0003735 "structural constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] InterPro:IPR001790 Pfam:PF00466 EMBL:AE014134 GO:GO:0006412 GO:GO:0042254 GO:GO:0005762 GO:GO:0003735 KO:K02864 CTD:124995 eggNOG:NOG303354 GeneTree:ENSGT00390000000603 OMA:VFPNQVL OrthoDB:EOG73RBCF EMBL:AY060877 EMBL:AY113438 RefSeq:NP_523440.1 UniGene:Dm.242 ProteinModelPortal:Q9VPL3 STRING:7227.FBpp0077783 PaxDb:Q9VPL3 PRIDE:Q9VPL3 EnsemblMetazoa:FBtr0078124 GeneID:33182 KEGG:dme:Dmel_CG11488 FlyBase:FBgn0031231 InParanoid:Q9VPL3 PhylomeDB:Q9VPL3 GenomeRNAi:33182 NextBio:782308 PRO:PR:Q9VPL3 Bgee:Q9VPL3 Uniprot:Q9VPL3)

HSP 1 Score: 45.8246 bits (107), Expect = 1.610e-5
Identity = 25/124 (20.16%), Postives = 56/124 (45.16%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQ 124
            + LK Y  +  +  +  T++E  +    S   N  + F  D E    L++  ++ P+++L+G +  + +L R  ++  + +P +  + +QL   L+      +  L +  +   Q L    K+Q
Sbjct:  119 LHLKSYGSKIIEQAVKNTRYEAIVPLFHS---NHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLHAVQAQLVQTLSQAPGHLIQQLQAHQNSFVQVLDVHAKNQ 239
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BLAST of EMLSAG00000005614 vs. GO
Match: - (symbol:mrpl10 "mitochondrial ribosomal protein L10" species:7955 "Danio rerio" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS] [GO:0003735 "structural constituent of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001790 Pfam:PF00466 ZFIN:ZDB-GENE-050320-19 GO:GO:0006412 GO:GO:0042254 GO:GO:0005762 GO:GO:0003735 KO:K02864 CTD:124995 eggNOG:NOG303354 GeneTree:ENSGT00390000000603 HOGENOM:HOG000231069 HOVERGEN:HBG080095 OMA:VFPNQVL OrthoDB:EOG73RBCF TreeFam:TF321349 EMBL:BC091546 RefSeq:NP_001013476.1 UniGene:Dr.86818 ProteinModelPortal:Q5BJB7 STRING:7955.ENSDARP00000066302 Ensembl:ENSDART00000066303 GeneID:541330 KEGG:dre:541330 InParanoid:Q5BJB7 NextBio:20879149 PRO:PR:Q5BJB7 Bgee:Q5BJB7 Uniprot:Q5BJB7)

HSP 1 Score: 43.8986 bits (102), Expect = 8.751e-5
Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 0 
Query:   53 KKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            +  P+++L+GA   + +   Q +L  S LP I ++  +L S LT    +T+S L    + LS  L Q++K QS
Sbjct:  165 RHNPQIVLLGACIENTLFSYQGILSYSKLPSIAIIRGELVSGLTMMTSKTVSMLHHHPAHLSALLQQYVKQQS 237
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BLAST of EMLSAG00000005614 vs. C. finmarchicus
Match: gi|592926886|gb|GAXK01031573.1| (TSA: Calanus finmarchicus comp21093_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 83.9593 bits (206), Expect = 2.616e-19
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTN---QYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTXXXXXXXXXXXXQNLSQFLKDQS 125
            MELK +N R  K+ L GTKWE CLHF  S   +   Q + F S+++    L+ +EKK PE  L+GAV + +IL R  V+++ ++PD+     QL ++L + Q + +  LGS    LS NL Q +KD++
Sbjct:  578 MELKRFNIRVGKSGLKGTKWENCLHFFHSFPGDANEQPILFSSELQP-KALLTYEKKVPEFHLLGAVVHGRILSRAGVMELQNIPDLTAQREQLVALLGANQGKLVQLLGSSQQQLSTNLDQLIKDKT 958
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BLAST of EMLSAG00000005614 vs. C. finmarchicus
Match: gi|592765304|gb|GAXK01189264.1| (TSA: Calanus finmarchicus comp857270_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 4.302e+0
Identity = 25/88 (28.41%), Postives = 38/88 (43.18%), Query Frame = 0 
Query:   20 WEKCLHFVESCRTNQYMTFGSD-IETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPD--------IQVLYSQLASILTSP 98
            W+K L F+ +   N+Y+   SD    LP   KF     + I    V   + L R D L + SLP         +++   Q+ S+ T P
Sbjct:  352 WQKLL*FINTFPVNKYLIHHSDCFSQLPERWKFLHCNADCICPLVVKN*QSLDRLDCL*VRSLPSPVLDLKEIVKMFLIQMNSLQTVP 615
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BLAST of EMLSAG00000005614 vs. C. finmarchicus
Match: gi|592765305|gb|GAXK01189263.1| (TSA: Calanus finmarchicus comp857270_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 4.434e+0
Identity = 25/88 (28.41%), Postives = 38/88 (43.18%), Query Frame = 0 
Query:   20 WEKCLHFVESCRTNQYMTFGSD-IETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPD--------IQVLYSQLASILTSP 98
            W+K L F+ +   N+Y+   SD    LP   KF     + I    V   + L R D L + SLP         +++   Q+ S+ T P
Sbjct:  352 WQKLL*FINTFPVNKYLIHHSDCFSQLPERWKFLHCNADCICPLVVKN*QSLDRLDCL*VRSLPSPVLDLKEIVKMFLIQMNSLQTVP 615
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BLAST of EMLSAG00000005614 vs. C. finmarchicus
Match: gi|592817307|gb|GAXK01137261.1| (TSA: Calanus finmarchicus comp165163_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 6.437e+0
Identity = 13/25 (52.00%), Postives = 14/25 (56.00%), Query Frame = 0 
Query:   15 LPGTKWEKCLHFVESCRTNQYMTFG 39
            LPGT    CLHF  SC+T    T G
Sbjct: 2371 LPGTPAPLCLHFSPSCQTLASQTLG 2445
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BLAST of EMLSAG00000005614 vs. L. salmonis peptides
Match: EMLSAP00000005614 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:EMLSAG00000005614 transcript:EMLSAT00000005614 description:"maker-LSalAtl2s3012-augustus-gene-0.6")

HSP 1 Score: 257.684 bits (657), Expect = 2.819e-89
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS
Sbjct:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
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BLAST of EMLSAG00000005614 vs. SwissProt
Match: gi|121995499|sp|Q29NV5.1|RM10_DROPS (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 50.8322 bits (120), Expect = 2.410e-7
Identity = 27/117 (23.08%), Postives = 57/117 (48.72%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNL 117
            + LK Y R+     + GT +E  +    S   N  + F  + + +  L+K  ++ P+++L+G +    +L R +++  + +P++Q   +QL   L     Q + +L +  + L Q L
Sbjct:  119 LHLKSYGRKIIDQAVTGTPYEAIMPLFHS---NHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQMPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVL 232
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BLAST of EMLSAG00000005614 vs. Select Arthropod Genomes
Match: EAA13853.5 (AGAP009988-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 48.521 bits (114), Expect = 6.192e-7
Identity = 28/125 (22.40%), Postives = 62/125 (49.60%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            + +K Y +   +  +  T++E  L   E+      + F  +++ +  ++   KKTP+L+L+G +   ++L + + +  +++PDI  + +Q A++L S   + +  L    S L   L  + K  S
Sbjct:  115 VSVKVYGKSIMRKAVADTRFEAILPLFEA---KTAIIFSPEVQKIKQVLSVLKKTPQLVLMGGIVEGRLLSKNEFMAYATMPDITTVRAQFAAVLDSVGGKIVGDLQCHQSQLVNLLDAYAKTDS 236
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BLAST of EMLSAG00000005614 vs. nr
Match: gi|290563044|gb|ADD38916.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 258.07 bits (658), Expect = 1.487e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS
Sbjct:  114 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|225713836|gb|ACO12764.1| (39S ribosomal protein L10, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 256.144 bits (653), Expect = 9.358e-85
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFG DIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS
Sbjct:  114 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGPDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|290462671|gb|ADD24383.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 255.758 bits (652), Expect = 1.140e-84
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFG DIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS
Sbjct:  114 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGPDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|290561395|gb|ADD38098.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 253.062 bits (645), Expect = 1.309e-83
Identity = 122/125 (97.60%), Postives = 124/125 (99.20%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            MELKDYN+RSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDI VLYSQLASILTSPQRQTLSYLG+GASGLSQNLSQFLKDQS
Sbjct:  114 MELKDYNQRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIHVLYSQLASILTSPQRQTLSYLGNGASGLSQNLSQFLKDQS 238
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|1005967645|ref|XP_015791676.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial-like [Tetranychus urticae])

HSP 1 Score: 60.8474 bits (146), Expect = 1.057e-8
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 0 
Query:    6 YNRRSCKAVLPGTKWEKCLHFV-ESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILT---SPQRQTLSYLGSGASGL 113
            Y        L  TK++  L F   SC+T   M FG ++   P L+K EK  P LIL+  V  D++LR+ ++++IS+LP++  L++QL   L    +    TL Y G+  S L
Sbjct:  132 YQNNIADLALKSTKYDPLLKFFSRSCKT--VMVFGDNLNVKP-LLKIEKTAPFLILMFGVYQDRVLRKDELIEISNLPNLSTLHAQLYHTLNTFGTSLTSTLDYHGNTLSNL 240
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|357611642|gb|EHJ67579.1| (putative mitochondrial ribosomal protein, L10 [Danaus plexippus])

HSP 1 Score: 58.5362 bits (140), Expect = 8.092e-8
Identity = 35/125 (28.00%), Postives = 63/125 (50.40%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            M L+ Y ++       GT++E   H   +C  N  + FG   E    + K  KKTP+++++  +  DK+L + +++Q S LP ++V  SQL S+L S     +  L      L  +L + ++ Q+
Sbjct:  120 MNLRTYGKKIVSMATKGTRYEAVNHLF-TCHQN--IIFGQP-ENAAKMFKILKKTPQMVVMAGIINDKLLSKNELVQFSKLPSLEVARSQLCSVLQSAASCLVGQLNQNQQVLVSHLEKHIEVQN 240
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|195433106|ref|XP_002064556.1| (uncharacterized protein Dwil_GK23913 [Drosophila willistoni] >gi|194160641|gb|EDW75542.1| uncharacterized protein Dwil_GK23913 [Drosophila willistoni])

HSP 1 Score: 57.3806 bits (137), Expect = 2.137e-7
Identity = 30/113 (26.55%), Postives = 54/113 (47.79%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGL 113
            M LK Y R+     + GT +E  +    S   N  + F  D + L  L++  +K P+++LIG +    +L R +++  + +P +QV  +QL   L     Q + +L +    L
Sbjct:  119 MHLKSYGRKIIGQAVAGTPYEAIMPLFHS---NHCIVFSPDQKRLSTLLRLTRKVPQMVLIGGIVEQTLLSRNELVAYAQMPSLQVAQAQLVQTLNQAAGQLVQHLQAHQGNL 228
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|1131317333|gb|JAV09026.1| (putative mitochondrial ribosomal protein l10, partial [Nyssomyia neivai])

HSP 1 Score: 56.9954 bits (136), Expect = 2.374e-7
Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTS 97
            M LK Y +++    L G K+E+ L   ++   N  + F  D      ++K  KK P+LILIGA+A D+IL +   +  ++LP I ++ +QL  +L S
Sbjct:   97 MHLKVYPKKALSLGLSGGKYEEILPLFDA---NCAVVFSPD-GNPSRMLKITKKVPQLILIGAIAEDRILSKNQFVDYAALPGIDIVRAQLVGVLNS 189
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|1036880626|ref|XP_016979377.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Drosophila rhopaloa])

HSP 1 Score: 56.9954 bits (136), Expect = 3.781e-7
Identity = 27/95 (28.42%), Postives = 51/95 (53.68%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASIL 95
            + LK Y R+     +  T++E  L    S   N  + F  D +T+ +L++  +K P+++L+G V  D +L R +++  + LP +Q + +QL   L
Sbjct:  164 LHLKSYGRKIISQAVAATRYEAILPLFHS---NHCIVFSPDQQTIGSLLRITRKVPQMVLLGGVVEDTLLSRNELMAYAQLPGLQAVQAQLVQTL 255
[Close]
BLAST of EMLSAG00000005614 vs. nr
Match: gi|524875655|ref|XP_005094552.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial-like [Aplysia californica] >gi|524875657|ref|XP_005094553.1| PREDICTED: 39S ribosomal protein L10, mitochondrial-like [Aplysia californica])

HSP 1 Score: 56.9954 bits (136), Expect = 4.289e-7
Identity = 37/120 (30.83%), Postives = 57/120 (47.50%), Query Frame = 0 
Query:   11 CKAVLPGTKWEKCLHFVESCRTNQYMTFG-----SDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
             +  +  TKW         C    Y T       S+   +P LIK  KKTPEL L+G +   +IL R+ +L ++ LP +  L  +L +IL++   +T  +L      LS NL+Q +   S
Sbjct:  146 ARKAVENTKW---------CNLEPYFTSSTAYVVSEQSKVPELIKLLKKTPELQLLGGLVEGRILSREVMLNVAKLPPLDTLRGELCTILSASASKTSRFLTRHQQDLSTNLTQLVAQGS 256
[Close]
BLAST of EMLSAG00000005614 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold170_size291898-snap-gene-1.44 (protein:Tk03011 transcript:maker-scaffold170_size291898-snap-gene-1.44-mRNA-1 annotation:"39s ribosomal protein mitochondrial")

HSP 1 Score: 113.235 bits (282), Expect = 3.705e-32
Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 0 
Query:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
            +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:  133 LELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005614 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 3
Match NameE-valueIdentityDescription
-3.746e-723.08symbol:mRpL10 "39S ribosomal protein L10, mitochon... [more]
-1.610e-520.16symbol:mRpL10 "mitochondrial ribosomal protein L10... [more]
-8.751e-532.88symbol:mrpl10 "mitochondrial ribosomal protein L10... [more]
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BLAST of EMLSAG00000005614 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592926886|gb|GAXK01031573.1|2.616e-1939.84TSA: Calanus finmarchicus comp21093_c0_seq1 transc... [more]
gi|592765304|gb|GAXK01189264.1|4.302e+028.41TSA: Calanus finmarchicus comp857270_c1_seq2 trans... [more]
gi|592765305|gb|GAXK01189263.1|4.434e+028.41TSA: Calanus finmarchicus comp857270_c1_seq1 trans... [more]
gi|592817307|gb|GAXK01137261.1|6.437e+052.00TSA: Calanus finmarchicus comp165163_c0_seq1 trans... [more]
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BLAST of EMLSAG00000005614 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000056142.819e-89100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s3012:1:11... [more]
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BLAST of EMLSAG00000005614 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
gi|121995499|sp|Q29NV5.1|RM10_DROPS2.410e-723.08RecName: Full=39S ribosomal protein L10, mitochond... [more]
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BLAST of EMLSAG00000005614 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
EAA13853.56.192e-722.40AGAP009988-PA, partial [Anopheles gambiae str. PES... [more]
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BLAST of EMLSAG00000005614 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 12
Match NameE-valueIdentityDescription
gi|290563044|gb|ADD38916.1|1.487e-85100.0039S ribosomal protein L10, mitochondrial [Lepeopht... [more]
gi|225713836|gb|ACO12764.1|9.358e-8599.2039S ribosomal protein L10, mitochondrial precursor... [more]
gi|290462671|gb|ADD24383.1|1.140e-8499.2039S ribosomal protein L10, mitochondrial [Lepeopht... [more]
gi|290561395|gb|ADD38098.1|1.309e-8397.6039S ribosomal protein L10, mitochondrial [Lepeopht... [more]
gi|1005967645|ref|XP_015791676.1|1.057e-834.82PREDICTED: 39S ribosomal protein L10, mitochondria... [more]
gi|357611642|gb|EHJ67579.1|8.092e-828.00putative mitochondrial ribosomal protein, L10 [Dan... [more]
gi|195433106|ref|XP_002064556.1|2.137e-726.55uncharacterized protein Dwil_GK23913 [Drosophila w... [more]
gi|1131317333|gb|JAV09026.1|2.374e-734.02putative mitochondrial ribosomal protein l10, part... [more]
gi|1036880626|ref|XP_016979377.1|3.781e-728.42PREDICTED: 39S ribosomal protein L10, mitochondria... [more]
gi|524875655|ref|XP_005094552.1|4.289e-730.83PREDICTED: 39S ribosomal protein L10, mitochondria... [more]

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BLAST of EMLSAG00000005614 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold170_size291898-snap-gene-1.443.705e-3244.80protein:Tk03011 transcript:maker-scaffold170_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3012supercontigLSalAtl2s3012:1..1104 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s3012-augustus-gene-0.6
Biotypeprotein_coding
EvidenceIEA
Note39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005614 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005614EMLSAT00000005614-701461Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s3012:1..1104+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005614-688380 ID=EMLSAG00000005614-688380|Name=EMLSAG00000005614|organism=Lepeophtheirus salmonis|type=gene|length=1104bp|location=Sequence derived from alignment at LSalAtl2s3012:1..1104+ (Lepeophtheirus salmonis)
AATTACCTTTCTTATGATAATAAACTAATTGTAAATTCATTTTGATTCAG
AGTTCAATCCCTCTCTAATTTCTTACTTACGTCTAGAATTGGCAAAACGC
GCGTCGCCTTGATATGGAGCTCAAGGACTATAATCGACGATCCTGCAAAG
CTGTTCTCCCCGGTACGAAATGGGAAAAATGTCTTCATTTTGTGGAGTCT
TGTAGAACGAATCAGTACATGACCTTCGGCTCAGACATCGAAACCCTTCC
CAATTTAATCAAGTTTGAAAAGAAAACTCCGGAGCTTATTTTGATAGGTA
AATTGTCCATTACAATTCATTCACTCCCTGTGCATTTGAATCCTATAATT
GTTGTTGCGTTCAAGTTAGGGTTTTGTATGTTGTAAATCATTTATGAATT
GACTACTATTTGAATGCTTACATCATATTTATTTAATTTTCAGGAGCTGT
TGCATACGACAAGATCTTGAGGCGACAAGATGTTCTACAAATATCAAGTT
TACCTGATATTCAGGTTCTATACAGTCAATTAGCATCCATTCTTACTTCT
CCACAACGGCAAACTCTATCTTATTTGGGAAGTGGGGCTAGTGGTCTATC
GCAAAATCTATCTCAATTCTTAAAGGATCAATCCTAATAACAATTTAATA
TTATACATCACAAATTTTGAATAAACTTTATCTGTATTACAAATGAGCTA
TCATTCAATATCTTCCAGTGGTTTTATGTATCTAGAGAAACTGTGGACTC
ACAAAAAATACAATTTATTATTAAATGTGTGATTGTGTATGTTCAATTTA
ATTGTTCCACAATAATATTTGGTTATATTAATGGATCTATAGAGTGTGAC
AGGGAATTTTCCGCAATCAAGAAGCAAAACCAAAATGAAAAATGTTATTG
AAAAAACTTTTAGCAATCAATCTTAGCAAGCATTATTCCATTTTGACCGC
CGAGGATTTTTTTATGCAAGGATAATTATATACTAAAACGTTTATTTATA
TAATTTTTTATTTCATCCTTCTTCCTTCATTGACCAATTTCTTATGTCAT
TTGTTCATATAAAATTTTTATTGCTTTATTACCTAATTAATCGCTAAATA
AAAA
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