EMLSAG00000006167, EMLSAG00000006167-688933 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006167 vs. C. finmarchicus
Match: gi|592832710|gb|GAXK01124834.1| (TSA: Calanus finmarchicus comp24469_c0_seq1 transcribed RNA sequence) HSP 1 Score: 52.7582 bits (125), Expect = 4.395e-6 Identity = 51/140 (36.43%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 643 EELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQAELQENLKSEKKLNSDMVXTXXXXXXXXXXXDRALNVESNTRQLIEKEIETLKKDYKSQLGISKRQ---LDKKDKQIAEKREEINSMKEIQNQILKLSKLHSAKS 779 EEL+ L K +YKD V L E ++++ + Q +L+ LK E + +M TL K+E++LKKK++ L+ E + R+ EKE E L+K S +SKRQ L+KK+K + E + E+ M+ +Q+ I LSK + + Sbjct: 353 EELQGEKVVLIEKYGRYKDQVVRLTEDLKQYKENQEQLELKLKQEMRGREEMAVTLNKREDRLKKKEKQLDEELSAREKAEKENEDLRKQCASLETLSKRQEQALNKKEKLLQESQAEVTEMRRVQDAIFNLSKTRGSAA 772
BLAST of EMLSAG00000006167 vs. L. salmonis peptides
Match: EMLSAP00000006167 (pep:novel supercontig:LSalAtl2s:LSalAtl2s336:634073:637214:-1 gene:EMLSAG00000006167 transcript:EMLSAT00000006167 description:"maker-LSalAtl2s336-augustus-gene-6.41") HSP 1 Score: 1564.28 bits (4049), Expect = 0.000e+0 Identity = 779/779 (100.00%), Postives = 779/779 (100.00%), Query Frame = 0 Query: 1 MVASISDVESFHRSVLDLRRDPGSECNKSAVEKGLSALNPNSLSQSKSLVSDLEWILETFSTSTSLIKTILNFLEKICEHNEEFRIFLRDSSNLMDLSMKFLSKYHSLKALRLIQYLVLGWKVGGPHMPKLEKLVQYVMKYITDGDREMTAPSVFILVCLYQLDFTIDNILIQEDVEYLFIQKQRDPKLQVLIKMLHYSISRSIFIDKALSENEGNYKQDNYVLIMIDAFCTAYADEDILTMRLFTEILKSITRETKNKSNIEGLYTLNLVRRINHIADFGEGSTLISNECMFEFLRRFLMMSWDYNKEAFNLIIKLISQRLESCLKSPLIETILCLQDVLGKDAEAVAISSESQTNGIVSKLLKLISSNKIDRMERLAVLRVLRTISKPDFNWSEYIVSKLPSPINFINSQIELIFDKDRSIPCVSVMLVDLILFCKELNDVNWKKIVEDVLLKNEHVIQSLRNCLNDFXHPSITKDIFLSTSNELLNTVHEEKNDDYTSKPRNLDLYGPVTGIFEDKIDSTVDFIRKSIENNKFGNISSSSVELFELGNFLKDTADHKLEILQHSLEVAEKTIDLENIRIVQVESQVKEFTHALSRMDELYNNKKVEINEIDSELESLESNSFSLKNEMRVALDKKIKEHEELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQAELQENLKSEKKLNSDMVXTLEKQEEKLKKKDRALNVESNTRQLIEKEIETLKKDYKSQLGISKRQLDKKDKQIAEKREEINSMKEIQNQILKLSKLHSAKS 779 MVASISDVESFHRSVLDLRRDPGSECNKSAVEKGLSALNPNSLSQSKSLVSDLEWILETFSTSTSLIKTILNFLEKICEHNEEFRIFLRDSSNLMDLSMKFLSKYHSLKALRLIQYLVLGWKVGGPHMPKLEKLVQYVMKYITDGDREMTAPSVFILVCLYQLDFTIDNILIQEDVEYLFIQKQRDPKLQVLIKMLHYSISRSIFIDKALSENEGNYKQDNYVLIMIDAFCTAYADEDILTMRLFTEILKSITRETKNKSNIEGLYTLNLVRRINHIADFGEGSTLISNECMFEFLRRFLMMSWDYNKEAFNLIIKLISQRLESCLKSPLIETILCLQDVLGKDAEAVAISSESQTNGIVSKLLKLISSNKIDRMERLAVLRVLRTISKPDFNWSEYIVSKLPSPINFINSQIELIFDKDRSIPCVSVMLVDLILFCKELNDVNWKKIVEDVLLKNEHVIQSLRNCLNDFXHPSITKDIFLSTSNELLNTVHEEKNDDYTSKPRNLDLYGPVTGIFEDKIDSTVDFIRKSIENNKFGNISSSSVELFELGNFLKDTADHKLEILQHSLEVAEKTIDLENIRIVQVESQVKEFTHALSRMDELYNNKKVEINEIDSELESLESNSFSLKNEMRVALDKKIKEHEELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQAELQENLKSEKKLNSDMVXTLEKQEEKLKKKDRALNVESNTRQLIEKEIETLKKDYKSQLGISKRQLDKKDKQIAEKREEINSMKEIQNQILKLSKLHSAKS Sbjct: 1 MVASISDVESFHRSVLDLRRDPGSECNKSAVEKGLSALNPNSLSQSKSLVSDLEWILETFSTSTSLIKTILNFLEKICEHNEEFRIFLRDSSNLMDLSMKFLSKYHSLKALRLIQYLVLGWKVGGPHMPKLEKLVQYVMKYITDGDREMTAPSVFILVCLYQLDFTIDNILIQEDVEYLFIQKQRDPKLQVLIKMLHYSISRSIFIDKALSENEGNYKQDNYVLIMIDAFCTAYADEDILTMRLFTEILKSITRETKNKSNIEGLYTLNLVRRINHIADFGEGSTLISNECMFEFLRRFLMMSWDYNKEAFNLIIKLISQRLESCLKSPLIETILCLQDVLGKDAEAVAISSESQTNGIVSKLLKLISSNKIDRMERLAVLRVLRTISKPDFNWSEYIVSKLPSPINFINSQIELIFDKDRSIPCVSVMLVDLILFCKELNDVNWKKIVEDVLLKNEHVIQSLRNCLNDFXHPSITKDIFLSTSNELLNTVHEEKNDDYTSKPRNLDLYGPVTGIFEDKIDSTVDFIRKSIENNKFGNISSSSVELFELGNFLKDTADHKLEILQHSLEVAEKTIDLENIRIVQVESQVKEFTHALSRMDELYNNKKVEINEIDSELESLESNSFSLKNEMRVALDKKIKEHEELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQAELQENLKSEKKLNSDMVXTLEKQEEKLKKKDRALNVESNTRQLIEKEIETLKKDYKSQLGISKRQLDKKDKQIAEKREEINSMKEIQNQILKLSKLHSAKS 779
BLAST of EMLSAG00000006167 vs. L. salmonis peptides
Match: EMLSAP00000000140 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1021:57445:61816:1 gene:EMLSAG00000000140 transcript:EMLSAT00000000140 description:"maker-LSalAtl2s1021-snap-gene-0.38") HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 362/725 (49.93%), Postives = 489/725 (67.45%), Query Frame = 0 Query: 1 MVASISDVESFHRSVLDLRRDPGSECNKSAVEKGLSALNPNSL--SQSKSLVSDLEWILETFSTSTSLIKTILNFLEKICEHNEEFRIFLRDSSNLMDLSMKFLSKYHSLKALRLIQYLVLGWKVGGPHMPKLEKLVQYVMKYITDGD-REMTAPSVFILVCLYQLD-FTIDNILIQEDVEYLFIQKQRDPKLQVLIKMLHYSISRSIFIDKALSE--NEGNYKQDNYVLIMIDAFCTAYADEDILTMRLFTEILKSITRETKNKSNIEGLYTLNLVRRINHIADFGEGSTLISNECMFEFLRRFLMMSWDYNKEAFNLIIKLISQRLESCLKSPLIETILCLQD---VLGKDAEAVAISSES-QTNGIVSKLLKLISSNKIDRMERLAVLRVLRTISKPDFNWSEYIVSKLPSPINFINSQIELIFDKDRSIPCVSVMLVDLILFCKELNDVNWKKIVEDVLLKNEHVIQSLRNCLNDFXHPSITKDI---FLSTSNELLNTVHEEKNDDYTSKPRNLDLYGPVTGIFEDKIDSTVDFIRKSIENNKFGNISSSSVELFELGNFLKDTADHKLEILQHSLEVAEKTIDLENIRIVQVESQVKEFTHALSRMDELYNNKKVEINEIDSELESLESNSFSLKNEMRVALDKKIKEHEELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQ--------AELQENLKSEKKLNSDMVXTLEKQEEK 704 M S S +E+FHR++L LR+DP SE NK +EKGL +NP+S +Q K+++ +LEWIL+T S+STSL+K IL+FLE IC +EE RIFLRDSSNL L +KFLS+ HSL+ALRLI++LVLGW++G + +LE+LVQY+MK+I D D +EM A SVFI+VCL + D IL Q+++EYLF KQ D KLQ LIKML+Y +S+S D++LSE NE N K ++Y++I+IDAFC+AY +D+L MRL TEIL+SIT+E K K E L TL+L + I I DFG+ S +SNE + FLR L +S D NK AF++I L SQRL+S L+SP++ET+LC+QD +LG DAE +A S+E + I+S+ L+ + SNKI+ M+RL+VL LR+ISK DFN SE IVS+L PI FINSQIELIF+K S+ CV+ +LV+LILFCKE ND+ WKK +EDV LKNE V+ SL CL HP+I K I + E EEK +D + L++Y P+T F N+SS+ +LFE GNF K +AD K E +Q L AE+TI + +VQ+ES+VK H +S M + K + +EL+S++SN+ SLKNEM+ AL +K++E+ ELE+NYEKLS KALKYK+D++ALQ+TIQEHF+ Q AE E L S K++ + + +KQ EK Sbjct: 1 MSLSTSGMETFHRTLLLLRKDPLSESNKLNLEKGLKTINPSSFVSTQGKTILCNLEWILQTHSSSTSLVKAILSFLENICILHEELRIFLRDSSNLFGLCLKFLSEIHSLRALRLIEHLVLGWRLGDSDVARLERLVQYLMKFIVDCDNKEMRASSVFIIVCLCHWNTCAADFILSQKEIEYLFNSKQTDLKLQALIKMLNYFMSQSRITDESLSEDPNEMN-KIESYIVILIDAFCSAYVCDDLLMMRLLTEILESITKERKTKRTTESLDTLSLAKGIILITDFGDESNQMSNEYILGFLRHLLKISSD-NKGAFDIISLLASQRLKSNLRSPILETMLCIQDGISLLGDDAEIIAKSNEGYMMDYIISQSLQTLLSNKINHMDRLSVLETLRSISKVDFNLSEMIVSRLQCPIQFINSQIELIFEKKNSLTCVAPVLVELILFCKEFNDIKWKKAIEDVFLKNERVVCSLITCLGSLCHPNILKCINETLIPLLKETSCVSREEKYEDCIPELTQLEMYRPLTS---------------------FENVSSA--DLFEFGNFQKYSADRKAEKIQQYLNAAEETIAKKKKYVVQLESKVKWLYHVMSLMVLRDDQIKFVLPRKRNELQSVQSNNLSLKNEMKSALHEKMRENGELEENYEKLSLKALKYKEDIDALQKTIQEHFQRQLDKKDKQLAEYSEELNSMKEIQNQIFNLSKKQAEK 700
BLAST of EMLSAG00000006167 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold262_size232883-processed-gene-1.8 (protein:Tk12541 transcript:snap_masked-scaffold262_size232883-processed-gene-1.8-mRNA-1 annotation:"protein cip2a") HSP 1 Score: 139.428 bits (350), Expect = 2.961e-34 Identity = 194/782 (24.81%), Postives = 363/782 (46.42%), Query Frame = 0 Query: 53 LEWILETFSTSTSL--IKTILNFLEKICEHNEEFRIFLRDS----SNLMDLSMKFLSKYH--SLKALRLIQYLVLGWKVGGPHMPKLEKLVQYVMKYITDGDREMTAPSVFILVCLYQLDFTIDNILI----QEDVEYLFIQKQRDPKLQVLIKMLHYSISRSIFIDKALSENEGNYKQDNYVLIMIDAFCTAYADEDILTMRLFTEILKSITR---------ETKNKSNIEGLYT-LNLVRRINHIADFGEGSTLISNECMFEFLRRFLMMSWDYNKE-----AFNLIIKLISQRLESCLKSP-----------LIETILCLQDVLGKDAEAVAISSESQTNGIVSKLLKLISSNKIDRMERL--AVLRVLRTISKPDFNWSEYIVSKLPSP--INFINSQIELIFDKDRSIPCVSVMLVDLILFCKEL--NDVNWKKIVEDVLLKNEHVIQSLRNCLNDFXHPSITKDIFLSTSNELLNTVHEE--------KNDDYTSKPRNLDLYGPVTGIFEDKI---DSTVDFIRKSIENNKFGN----ISSSSVELFELGNFLKDTADHKLEILQHSLEVAEKTIDLENIRIVQVESQVKEFTHALSRMDELYNNKKVEINEIDSELESLESNSFSLKNEMRVALDKKIKEHEELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQAELQENLKSEKKLNSDMVXTLEKQEEKLKKKDRALNVESNTRQLIEKEIETLKKDYKSQLGISKRQ---LDKKDKQIAEKREEINSMKEIQNQILKLS 772 + W L+ L I TI+ L K + R +L S L DL + + H +K L L++++ + L+ LV +++ I + D E+ + S++IL L + I L+ +E + L IQ D K++VL + L++ ++R A + ++++ + DA CTAY++E +L M F E L+ I + + + + + Y+ L ++++I + +F EGS +NE +F+FLR L++ W+ +++ + I+ L+ + + L + L+E + L G ++ Q I + L + +NK +R A L ++ TIS+ +W + + + LP N + S+ + L +I K L +D +W K L + +++ + DI SN + V E+ +D + L+ + E +I ++T++ + K + G+ I S E+ +LG++ + K++ L SL A+ I +N I +E+++ + L + + +N ++++ ++ + ESL+ + +++ + K E +E+E K+++KA+KYK+ E LQ I+EH + + EL++ LK+E K NSD+ LEK+EEKLKKK+R L E R + E+ETLKK+ S ++KRQ L KKDK +A++ +E++ ++ IQ QI LS Sbjct: 1 MAWYLQQHHKEYKLSSIWTIIKLLTKWSSQSHPIRTYLAGSMAMAPYLTDLYLLLPATSHERGVKVLALLRHVTAHLVLRRCETFVLD-LVPKLVELIENPDMELRSHSLYILTSLCRGSRVISKYLLSQLSEEQQKGLVIQDDEDAKVKVLTRHLNFCLTRLNLSFNAFEL----FGSESHLATISDALCTAYSEEQVLLMERFAEFLQDILQVQSVNPCPNQIQRGGDQDSQYSILPMMQQILLVVEFSEGSNPYANEAVFKFLR--LLLRWEPSRQPPSDNSLGAIMDLVLKSVSLLLDTSGSNIRAQEAIHLLEETIQLFHSQGNPDSTERLNVRLQMEPIFTNLCPRMEANKPKTSDRTLEATLSLMCTISELGESWDDLVRNNLPLTKFRNLVQSETN------------PMCLTKMIRLAKILAHDDKDWTKFHMSCLSHDRMTKMLIKHLQSTLCSAMERSDILHVMSNGTIARVSEDGRTLDLEFATEDMVENGSSSPLFCSNPFLKESQILHLENTLNAVNKIAQAAGGGDAKKAIGSVVPEILDLGDYRLISQQRKIDSLVSSLRSADARILHQNEHISTLEAELTKTFSMLRLVLQKSHNLELDLEDVRLQFESLQEEAGDFRSKANQTIASKELEIKEMETERSKITTKAIKYKEQNETLQIAIKEHMQAEEELKQKLKNEAKSNSDLTAALEKREEKLKKKERQLEDEIGQRDHLAGELETLKKECASLQTLTKRQEQALAKKDKLLADQHDELHEVRRIQEQIFNLS 763 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006167 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006167 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000006167 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000006167 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006167 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006167 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006167 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s336:634073..637214- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006167-688933 ID=EMLSAG00000006167-688933|Name=EMLSAG00000006167|organism=Lepeophtheirus salmonis|type=gene|length=3142bp|location=Sequence derived from alignment at LSalAtl2s336:634073..637214- (Lepeophtheirus salmonis)back to top Add to Basket
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