EMLSAG00000006190, EMLSAG00000006190-688956 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006190 vs. C. finmarchicus
Match: gi|592760155|gb|GAXK01194258.1| (TSA: Calanus finmarchicus comp1815872_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 1.994e+0 Identity = 13/41 (31.71%), Postives = 23/41 (56.10%), Query Frame = 0 Query: 57 DDRGKSAKPTK----RNQNNIDLVGNYICSNRRVKIEGIAI 93 +D K+ K TK +N + GN+ICS +K+ G+++ Sbjct: 781 EDNSKTVKCTKCEIEETKNQCENCGNFICSKCEIKVHGVSV 903
BLAST of EMLSAG00000006190 vs. L. salmonis peptides
Match: EMLSAP00000006190 (pep:novel supercontig:LSalAtl2s:LSalAtl2s338:124263:141354:-1 gene:EMLSAG00000006190 transcript:EMLSAT00000006190 description:"snap_masked-LSalAtl2s338-processed-gene-1.8") HSP 1 Score: 186.808 bits (473), Expect = 2.097e-62 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 Query: 1 MLIESSSKHSCLINRGGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKPTKRNQNNIDLVGNYICSNRRVKIEGIAI 93 MLIESSSKHSCLINRGGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKPTKRNQNNIDLVGNYICSNRRVKIEGIAI Sbjct: 1 MLIESSSKHSCLINRGGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKPTKRNQNNIDLVGNYICSNRRVKIEGIAI 93
BLAST of EMLSAG00000006190 vs. SwissProt
Match: gi|121943108|sp|Q3ZCU0.1|YK006_HUMAN (RecName: Full=Putative uncharacterized protein FLJ37770) HSP 1 Score: 65.4698 bits (158), Expect = 4.033e-13 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YG+ ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|281353132|gb|EFB28716.1| (hypothetical protein PANDA_003316, partial [Ailuropoda melanoleuca]) HSP 1 Score: 66.2402 bits (160), Expect = 6.185e-12 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0 Query: 17 GKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YG+ ++SR+RVF HK F GRE + DD +S +P T R NI V + +CSNRR+ + +A Sbjct: 19 NKSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDENIQKVKDLVCSNRRLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|928165301|ref|XP_013978032.1| (PREDICTED: putative uncharacterized protein FLJ37770 [Canis lupus familiaris]) HSP 1 Score: 67.0106 bits (162), Expect = 1.157e-11 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YG+ ++SR+RVF HK F GRE + DD +S +P T R NI V + +CSNRR+ + IA Sbjct: 20 KSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDENIQKVKDLVCSNRRLTVRMIA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|544488570|ref|XP_005579188.1| (PREDICTED: putative uncharacterized protein FLJ37770 isoform X2 [Macaca fascicularis]) HSP 1 Score: 66.2402 bits (160), Expect = 1.351e-11 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YGE ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGEEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|1104519505|ref|XP_019061795.1| (PREDICTED: LOW QUALITY PROTEIN: putative uncharacterized protein FLJ37770 [Fukomys damarensis]) HSP 1 Score: 67.0106 bits (162), Expect = 1.373e-11 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0 Query: 17 GKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YG+ ++SR+R+F HK F +GRE + DD +S +P T R NI V N +CSNR++ + +A Sbjct: 19 SKSASETHHLLKEAYGDEVMSRARIFDWHKRFKDGREDVRDD-ARSGRPVTHRTDENIQKVKNLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|1059101701|ref|XP_017724128.1| (PREDICTED: putative uncharacterized protein FLJ37770 isoform X3 [Rhinopithecus bieti]) HSP 1 Score: 66.2402 bits (160), Expect = 1.519e-11 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YGE ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGEEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|795075691|ref|XP_011844753.1| (PREDICTED: putative uncharacterized protein FLJ37770 isoform X3 [Mandrillus leucophaeus]) HSP 1 Score: 65.855 bits (159), Expect = 1.667e-11 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YGE ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGEEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|675695846|ref|XP_008958510.1| (PREDICTED: putative uncharacterized protein FLJ37770 isoform X4 [Pan paniscus]) HSP 1 Score: 65.0846 bits (157), Expect = 1.930e-11 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YG+ ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|1126246706|ref|XP_019650918.1| (PREDICTED: putative uncharacterized protein FLJ37770 [Ailuropoda melanoleuca]) HSP 1 Score: 66.6254 bits (161), Expect = 1.934e-11 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0 Query: 17 GKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YG+ ++SR+RVF HK F GRE + DD +S +P T R NI V + +CSNRR+ + +A Sbjct: 19 NKSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDENIQKVKDLVCSNRRLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|1059101695|ref|XP_017724125.1| (PREDICTED: putative uncharacterized protein FLJ37770 isoform X1 [Rhinopithecus bieti]) HSP 1 Score: 66.2402 bits (160), Expect = 2.265e-11 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YGE ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGEEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. nr
Match: gi|795075681|ref|XP_011844738.1| (PREDICTED: putative uncharacterized protein FLJ37770 isoform X1 [Mandrillus leucophaeus] >gi|795518430|ref|XP_011900173.1| PREDICTED: putative uncharacterized protein FLJ37770 [Cercocebus atys] >gi|795518435|ref|XP_011900175.1| PREDICTED: putative uncharacterized protein FLJ37770 [Cercocebus atys] >gi|982296244|ref|XP_015290994.1| PREDICTED: putative uncharacterized protein FLJ37770 isoform X1 [Macaca fascicularis] >gi|982296246|ref|XP_015290995.1| PREDICTED: putative uncharacterized protein FLJ37770 isoform X1 [Macaca fascicularis]) HSP 1 Score: 66.2402 bits (160), Expect = 2.387e-11 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 18 KSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIA 92 KS + + LL E YGE ++SR+RVF HK F GRE + DD +S +P T R +NI V + +CSNR++ + +A Sbjct: 20 KSASETHHLLKEAYGEEVMSRARVFDWHKRFKEGREDVRDD-ARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMA 94
BLAST of EMLSAG00000006190 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold103_size370364-snap-gene-2.28 (protein:Tk07526 transcript:maker-scaffold103_size370364-snap-gene-2.28-mRNA-1 annotation:"glycoside hydrolase family 5 protein") HSP 1 Score: 62.7734 bits (151), Expect = 2.487e-13 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 17 GKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNIDLVGNYICSNRRVKIEGIAI 93 GKS + +KLL E YG L RS+ F+LHKE GR+ ++D RG+ + T R N+ V + I ++RR+ I+ +AI Sbjct: 509 GKSATETHKLLKEGYGGKALGRSQTFQLHKEVREGRQDVQDQRGRHGQQRTVRTPENVAKVDSLISADRRLTIDEVAI 586
BLAST of EMLSAG00000006190 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold62_size438377-processed-gene-1.2 (protein:Tk07846 transcript:snap_masked-scaffold62_size438377-processed-gene-1.2-mRNA-1 annotation:"PREDICTED: putative uncharacterized protein FLJ37770") HSP 1 Score: 52.7582 bits (125), Expect = 2.873e-10 Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 0 Query: 15 RGGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKPTKRNQNNIDLV 76 + GKS +A LL YG+ LS+S+VFKLH EF GRE IE GK+ R NI+LV Sbjct: 50 KAGKSATEALILLKVVYGDKALSKSQVFKLHPEFKEGREDIEKVTGKATPRRVRTPENIELV 111
BLAST of EMLSAG00000006190 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold224_size251237-snap-gene-1.55 (protein:Tk05453 transcript:maker-scaffold224_size251237-snap-gene-1.55-mRNA-1 annotation:"rna polymerase ii second largest subunit") HSP 1 Score: 53.9138 bits (128), Expect = 3.047e-10 Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 0 Query: 15 RGGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKPTKRNQNNIDL 75 + GKS +A +LL E YG+ LS+++VF+ H++F NGRE + GK+++ R + NI L Sbjct: 13 KAGKSATEALRLLREAYGDKALSKTQVFEWHRQFRNGREDSQSRTGKTSRRPSRTEENIVL 73
BLAST of EMLSAG00000006190 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold11_size778918-processed-gene-2.3 (protein:Tk03659 transcript:snap_masked-scaffold11_size778918-processed-gene-2.3-mRNA-1 annotation:"Putative uncharacterized protein FLJ37770") HSP 1 Score: 45.8246 bits (107), Expect = 1.977e-8 Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 Query: 15 RGGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKS 62 + GKS + LL YG+ LS+S++FKLH+EF GRE IE GK+ Sbjct: 13 KAGKSATEVLILLKVAYGDKALSQSQLFKLHREFKEGREDIEKAHGKA 60
BLAST of EMLSAG00000006190 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold714_size108203-snap-gene-0.17 (protein:Tk02389 transcript:maker-scaffold714_size108203-snap-gene-0.17-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC101285465") HSP 1 Score: 47.7506 bits (112), Expect = 5.041e-8 Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 Query: 16 GGKSGVKANKLLLEPYGELLLSRSRVFKLHKEFINGRESIEDDRGKSAKP-TKRNQNNI 73 GKS + +KLL+E YG L RS+ F+L KE GR+ ++D RG+ + T R N+ Sbjct: 1337 AGKSATETHKLLIEAYGGKALGRSQTFQLPKEVREGRQYVQDQRGRPGQQRTVRTPENV 1395 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006190 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006190 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000006190 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000006190 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 1
BLAST of EMLSAG00000006190 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006190 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006190 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 5
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s338:124263..141354- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006190-688956 ID=EMLSAG00000006190-688956|Name=EMLSAG00000006190|organism=Lepeophtheirus salmonis|type=gene|length=17092bp|location=Sequence derived from alignment at LSalAtl2s338:124263..141354- (Lepeophtheirus salmonis)back to top Add to Basket
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