EMLSAG00000006347, EMLSAG00000006347-689113 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006347 vs. L. salmonis peptides
Match: EMLSAP00000006347 (pep:novel supercontig:LSalAtl2s:LSalAtl2s346:648733:650315:1 gene:EMLSAG00000006347 transcript:EMLSAT00000006347 description:"maker-LSalAtl2s346-augustus-gene-6.36") HSP 1 Score: 917.146 bits (2369), Expect = 0.000e+0 Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0 Query: 1 MDLCNSTKMNVCSQEGSLQESHPIINLNVPIPKNVDGKVKVTTVSTKTQVRYRRSESSMNFQMCDPQYKITRSWSAMMLPDTVKCEEETNQKAAIEENKCGSNLNSLILDASYQHLMNSVDLQSCTTSHFSVSKGSTFDLYEKLLESSPSCGSLIIESVPHMENKCNLNVSLSSNKLCPGSQEWNSGTYYSSNNEQLNSTIQPDDDMSMTIYPKKVGNEPECSDIRPLNNQSVFTPHIRSSEDLHSPLLISSLNLTNCKSSHTYNAFFKGSNDCSISLPTPPKKLCKICRRIIIEKKLEYIISMDPCNVMAPKALTKHLYTVERETPDCQHRCYFTGIGRAGGDPLQDLSIFGVPNDDPCRIETKIRTTIISEIDPTCKCVNDNFDSFIDRHCIDDNIKEFVERLSCDQLTKEDPRTLRVANIITVAQTKNVCPEEIFKKKGSIY 445 MDLCNSTKMNVCSQEGSLQESHPIINLNVPIPKNVDGKVKVTTVSTKTQVRYRRSESSMNFQMCDPQYKITRSWSAMMLPDTVKCEEETNQKAAIEENKCGSNLNSLILDASYQHLMNSVDLQSCTTSHFSVSKGSTFDLYEKLLESSPSCGSLIIESVPHMENKCNLNVSLSSNKLCPGSQEWNSGTYYSSNNEQLNSTIQPDDDMSMTIYPKKVGNEPECSDIRPLNNQSVFTPHIRSSEDLHSPLLISSLNLTNCKSSHTYNAFFKGSNDCSISLPTPPKKLCKICRRIIIEKKLEYIISMDPCNVMAPKALTKHLYTVERETPDCQHRCYFTGIGRAGGDPLQDLSIFGVPNDDPCRIETKIRTTIISEIDPTCKCVNDNFDSFIDRHCIDDNIKEFVERLSCDQLTKEDPRTLRVANIITVAQTKNVCPEEIFKKKGSIY Sbjct: 1 MDLCNSTKMNVCSQEGSLQESHPIINLNVPIPKNVDGKVKVTTVSTKTQVRYRRSESSMNFQMCDPQYKITRSWSAMMLPDTVKCEEETNQKAAIEENKCGSNLNSLILDASYQHLMNSVDLQSCTTSHFSVSKGSTFDLYEKLLESSPSCGSLIIESVPHMENKCNLNVSLSSNKLCPGSQEWNSGTYYSSNNEQLNSTIQPDDDMSMTIYPKKVGNEPECSDIRPLNNQSVFTPHIRSSEDLHSPLLISSLNLTNCKSSHTYNAFFKGSNDCSISLPTPPKKLCKICRRIIIEKKLEYIISMDPCNVMAPKALTKHLYTVERETPDCQHRCYFTGIGRAGGDPLQDLSIFGVPNDDPCRIETKIRTTIISEIDPTCKCVNDNFDSFIDRHCIDDNIKEFVERLSCDQLTKEDPRTLRVANIITVAQTKNVCPEEIFKKKGSIY 445
BLAST of EMLSAG00000006347 vs. L. salmonis peptides
Match: EMLSAP00000010398 (pep:novel supercontig:LSalAtl2s:LSalAtl2s68:343786:345681:1 gene:EMLSAG00000010398 transcript:EMLSAT00000010398 description:"maker-LSalAtl2s68-augustus-gene-3.28") HSP 1 Score: 214.542 bits (545), Expect = 8.518e-64 Identity = 172/465 (36.99%), Postives = 246/465 (52.90%), Query Frame = 0 Query: 1 MDLCNSTKMNVCSQEGSLQESHPIINLNVPIPKNVDGKVKVTTVSTKTQVRYRRSESSMNFQMCDPQYKITRSWSAMMLPDTVKCEEETNQKAAIEENKCGSNLNSLILDASYQHLMNSVDLQSCTTSH------FSVSKGSTFDLYEKLLESSPSCGSLIIESVPHMENKCNLNVSLSSNKLCPGSQEWNSGTYYSSNNEQLNSTIQPDDDMSM--TIYPKK---VGNEPECSDIRPLNNQSVFTPHIRSSEDLHSPLLISSLNLTNCKSSHTYNAFFKGSNDCSISLPTPPKKLC-------------KICRRIIIEKKLEYIISMDPCNVMAPKALTKHLYTVERETPDCQHRCYFTGIGRAGGDPLQDLSIFGVPNDDPCRIETKIRTTIISEIDPTCKCVNDNFDSFIDRHCIDDNIKEFVERLSCDQLTKEDPRTLRVANIITVAQTKNVCPEEIFKKK 441 MD T+ + SL++ P+++LNVP PK+V GKVKV T+STKTQVRYR +++C+PQYKITR W+A T K E+ N ++ I SY+ + +D + C S S+S S+ LYE L SS SC S E +++ N +V K P +NS SS + + D+ M M ++ P K + N + D+ +S TP SPL+ SSLN++ KS H Y + K S S S P P KICR +I EKKL+YI++ +P N+++PK LT+ T E P C+H CYFTGIGR D L+D++IFGV + CRIET++RTTII E D C ++ SFI RH ID++I + +L+ DQ+ ++DP R+A++ITVAQ K V PE++FK++ Sbjct: 1 MDTSKETQNKDSKEIESLEQDRPLVSLNVPFPKDVVGKVKVKTISTKTQVRYRSKGDPEEYKVCEPQYKITRLWNA------------TVSKTYPLEDTSSPNKSNSIQYESYEKSKD-MDSEKCKMSFEKKLSRLSLSSYSSISLYENALFSS-SCDSNE-EEDDYIDG--NSSVKFPRTKSTPS---FNSYDSLSSKDSSSEKDSEIDEQMIMKHSVTPYKGEILNNTSQNVDVTKRTGRSCVTP----PNGCPSPLMYSSLNISTAKSHHAYKTYVKSS--YSKSFPCGPTSTGTSLEKFQVPDTCDKICRTVIAEKKLQYIMANEPDNIISPKILTRKFKTFECLDPACRHHCYFTGIGRVAQDTLKDIAIFGVERYNLCRIETRLRTTIIIERDSDCDNFPNDIKSFIGRHNIDEDISDCFIKLADDQVGRDDPNIRRIADVITVAQMKKVDPEDLFKEQ 439
BLAST of EMLSAG00000006347 vs. L. salmonis peptides
Match: EMLSAP00000010399 (pep:novel supercontig:LSalAtl2s:LSalAtl2s68:348363:350705:1 gene:EMLSAG00000010399 transcript:EMLSAT00000010399 description:"maker-LSalAtl2s68-augustus-gene-3.29") HSP 1 Score: 117.087 bits (292), Expect = 4.521e-29 Identity = 67/157 (42.68%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 282 PKKLCKICRRIIIEKKLEYIISMDPCNVMAPKALTKHLYTVERETPDCQHRCYFTGIGRAGGDPLQDLSIFGVPNDD-PCRIETKIRTTIISEIDPTCKCVNDNFDSFIDRHCIDDNIKEFVERLSCDQLTKEDPRTLRVANIITVAQTKNVCPEEI 437 P KI R + +EK+L Y+ + P P A+ K TVE +C+ YFTG + +PL +LSIF + P RIETKIRTT++SEI + ND + +FID H ID+ I +LS Q+ K DPR LRVA +ITV Q K V PE++ Sbjct: 285 PGDEGKIYRILNVEKQLTYVPEVSPNKFCKPNAVIKRYRTVENPITECESSKYFTGFEKVFPNPLTNLSIFFKKKETIPPRIETKIRTTMVSEIVDRKEVGNDAYKNFIDTHEIDEEIPIHFTKLSKKQIEKNDPRILRVAXVITVXQXKKVTPEQL 441 HSP 2 Score: 87.8113 bits (216), Expect = 5.909e-19 Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 0 Query: 19 QESHPIINLNVPIPKNVDGKVKVTTVSTKTQVRYRRSESSMNFQMCDPQYKITRSWSAMMLPDTVKCEEETNQKAAIEENKCGSNLNSL 107 Q+ P+INLNVP+PK+V GKV+VTTVSTKTQVRY++++ ++ C P +++TRSWSA++ P+ E + + +E KC SL Sbjct: 14 QDDRPVINLNVPLPKDVVGKVRVTTVSTKTQVRYKKNQEDEDYHACHPSFRVTRSWSALVNPE----EAKKGIQLKLESEKCEDYQQSL 98
BLAST of EMLSAG00000006347 vs. L. salmonis peptides
Match: EMLSAP00000007622 (pep:novel supercontig:LSalAtl2s:LSalAtl2s43:825507:853210:1 gene:EMLSAG00000007622 transcript:EMLSAT00000007622 description:"maker-LSalAtl2s43-augustus-gene-8.9") HSP 1 Score: 83.5741 bits (205), Expect = 2.403e-17 Identity = 48/142 (33.80%), Postives = 82/142 (57.75%), Query Frame = 0 Query: 288 ICRRIIIEKKLEYIISMDPCNVMAPKALTKHLYTVERETPDCQHRCYFTGIGRAGGDPLQDLSIFGVPNDDPCRIETKIRTTIISEIDPTCKCVNDNFDSFIDRHCIDDNIKEFVERLSCDQ-LTKEDPRTLRVANIITVAQ 428 + R++++EKKL+YI + +P + M K L+K T E P C Y R+ DPL+DLS+FGV + +E ++RTTI++++DP D ++H + KE S ++ + + +P+++RV++IITVAQ Sbjct: 464 VNRQVLVEKKLDYITTNEPAHKMKSKTLSKKYKTTESLIPGCPTAKYLGNAKRSHYDPLKDLSMFGVETHE--IMEKRVRTTILTQLDPES-------DPSSEQHA---SKKEVSLTASINESMAESEPKSVRVSDIITVAQ 593 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006347 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006347 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000006347 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000006347 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006347 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006347 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006347 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s346:648733..650315+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006347-689113 ID=EMLSAG00000006347-689113|Name=EMLSAG00000006347|organism=Lepeophtheirus salmonis|type=gene|length=1583bp|location=Sequence derived from alignment at LSalAtl2s346:648733..650315+ (Lepeophtheirus salmonis)back to top Add to Basket
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