EMLSAG00000006643, EMLSAG00000006643-689409 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000006643
Unique NameEMLSAG00000006643-689409
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000006643 vs. C. finmarchicus
Match: gi|592880424|gb|GAXK01077477.1| (TSA: Calanus finmarchicus comp427153_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 4.163e+0
Identity = 16/45 (35.56%), Postives = 25/45 (55.56%), Query Frame = 0 
Query:   62 SFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTC 106
            SFC     F +  N+TC+D DE  C + +G+  + C + A  +TC
Sbjct: 1535 SFCDCRPGFWLAGNSTCKDIDE--CQAIVGACSQICENTAGSFTC 1663
[Close]
BLAST of EMLSAG00000006643 vs. C. finmarchicus
Match: gi|592889986|gb|GAXK01068389.1| (TSA: Calanus finmarchicus comp17248_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 6.213e+0
Identity = 26/81 (32.10%), Postives = 35/81 (43.21%), Query Frame = 0 
Query:   67 HQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAG 147
            H CFG+   T       T+ HS +G+   +C  + F      S G C A C    G   +DS+E CF   +   C  SC G
Sbjct:  132 HCCFGVCLGTFWHSWRGTFLHSCLGTCLGTC--SHF------STGTCLATCL---GMFLQDSLETCFGTFLG-ICWHSCLG 338
[Close]
BLAST of EMLSAG00000006643 vs. C. finmarchicus
Match: gi|592867997|gb|GAXK01089565.1| (TSA: Calanus finmarchicus comp421231_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 6.819e+0
Identity = 35/124 (28.23%), Postives = 50/124 (40.32%), Query Frame = 0 
Query:   77 TCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDS-IEECFEPQ--IANECPKSCAGCD-------------ECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLC 184
            TC+D D  YC +    S+ +   +     CP +C  CD  C D N  C   + + EC+  +  +   C KSC+ C               CE      FC S++ R      V+  CRK C  C
Sbjct:   78 TCKD-DNIYCATWASLSECTANPSWMLVHCPIACDQCDLTCEDYNTYCEEWTRVGECYNNREYMGIYCRKSCSLCSPPPAPACQDSDAKRCERWGRKGFCTSVRYR----DFVRDKCRKTCRSC 434
[Close]
BLAST of EMLSAG00000006643 vs. C. finmarchicus
Match: gi|592947882|gb|GAXK01010671.1| (TSA: Calanus finmarchicus comp2643362_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 7.872e+0
Identity = 18/51 (35.29%), Postives = 26/51 (50.98%), Query Frame = 0 
Query:   64 CLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICD 114
            C+ ++ F + +NT    T   Y H  I S+ ES FD+ F Y C     IC+
Sbjct:    5 CVLNKYFPVQANTL--TTFNPYFHEFIISNPESFFDSLFIYCCKNIARICE 151
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000006643 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789:7712:-1 gene:EMLSAG00000006643 transcript:EMLSAT00000006643 description:"maker-LSalAtl2s3671-snap-gene-0.3")

HSP 1 Score: 432.565 bits (1111), Expect = 2.320e-155
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 
Query:    1 RNKYIESIHAKYLYFYAVLRYVIFQTYVNIQVVFYNNLSIYKHFSKSRDMETNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARDMMNFVQQK 213
            RNKYIESIHAKYLYFYAVLRYVIFQTYVNIQVVFYNNLSIYKHFSKSRDMETNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARDMMNFVQQK
Sbjct:    1 RNKYIESIHAKYLYFYAVLRYVIFQTYVNIQVVFYNNLSIYKHFSKSRDMETNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARDMMNFVQQK 213
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000003375 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1851:16797:17679:1 gene:EMLSAG00000003375 transcript:EMLSAT00000003375 description:"maker-LSalAtl2s1851-augustus-gene-0.4")

HSP 1 Score: 232.261 bits (591), Expect = 1.472e-77
Identity = 120/156 (76.92%), Postives = 121/156 (77.56%), Query Frame = 0 
Query:   50 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARD 205
            METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRD+NGACYRDSIEECFEPQIANECPKSCAGCDE                                   SNCNNAYYDDTVCEEYQARD
Sbjct:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDSNGACYRDSIEECFEPQIANECPKSCAGCDE-----------------------------------SNCNNAYYDDTVCEEYQARD 121
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000012209 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8853:989:1792:-1 gene:EMLSAG00000012209 transcript:EMLSAT00000012209 description:"maker-LSalAtl2s8853-snap-gene-0.3")

HSP 1 Score: 212.231 bits (539), Expect = 9.371e-70
Identity = 113/156 (72.44%), Postives = 116/156 (74.36%), Query Frame = 0 
Query:   50 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARD 205
            METNRVLILHLLSFCLFHQCFGILSNTTCEDTDE YCHSSIGSSKESCFDAAFQYT                                   CPKSC  CDECEDLISIEFCESIKNRC+TDASV+YSCRK C LCKSNCNNAYYDDTVCEEYQAR+
Sbjct:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYT-----------------------------------CPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARE 121
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000005292 (pep:novel supercontig:LSalAtl2s:LSalAtl2s282:38031:38884:1 gene:EMLSAG00000005292 transcript:EMLSAT00000005292 description:"maker-LSalAtl2s282-augustus-gene-0.13")

HSP 1 Score: 193.356 bits (490), Expect = 2.105e-62
Identity = 99/155 (63.87%), Postives = 105/155 (67.74%), Query Frame = 0 
Query:   50 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQAR 204
            METNRVLILH LSFCLF  CFGILSNTTCEDTDETYC SSIGS KESCF+AAFQYTCPKSCG CDAKCRDNNGACYRD ++ECF P IA ECPKSCA CD+                                   SNCNN +Y D VCEEY+ R
Sbjct:    1 METNRVLILHFLSFCLFQTCFGILSNTTCEDTDETYCQSSIGSDKESCFNAAFQYTCPKSCGACDAKCRDNNGACYRDGVDECFLPHIAKECPKSCAECDD-----------------------------------SNCNNPFYKDAVCEEYKVR 120
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000003839 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:636:1 gene:EMLSAG00000003839 transcript:EMLSAT00000003839 description:"augustus_masked-LSalAtl2s2089-processed-gene-0.0")

HSP 1 Score: 150.984 bits (380), Expect = 4.184e-46
Identity = 71/96 (73.96%), Postives = 81/96 (84.38%), Query Frame = 0 
Query:  115 AKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARDMMNFV 210
            AKCRDNNGACYRD +EECF P IA +CPK+CAGCDECEDLISIEFCE  +NRC+TD  ++YSCRK C LCKS+CNNAYYDD VCEEY+AR+    V
Sbjct:    5 AKCRDNNGACYRDGVEECFLPHIAKDCPKTCAGCDECEDLISIEFCELYQNRCNTDTPIRYSCRKTCGLCKSDCNNAYYDDAVCEEYKARNTCEDV 100
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10")

HSP 1 Score: 117.087 bits (292), Expect = 1.527e-32
Identity = 59/159 (37.11%), Postives = 94/159 (59.12%), Query Frame = 0 
Query:   50 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARDMMN 208
            M T  + +L LL  C  +  FG+++   C ++    C   + ++  +C   ++Q+TCP+ CG+C A+C+D    C+ DS   C +  +   CPKSCA CDECED+IS   CE  + RC TD SV Y+CR+ C LC  +CN+A+  +++C  +++R   N
Sbjct:    1 MATPYISLLFLL--CCAYSAFGLITEFECRNSYHN-CRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCF-DSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCN 155
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11")

HSP 1 Score: 101.293 bits (251), Expect = 8.636e-27
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 0 
Query:  103 QYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQ 202
            Q+ CP+ CG+C A CRD   +C   S E C +  I  +CPKSCA CD+CEDLI+ + C   K+RC  D SVQY+CRK C LC  +CN+A   +++C +++
Sbjct:    9 QWMCPEQCGVCQASCRDTGASCLEHS-ESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFE 107
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000010898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203:28961:-1 gene:EMLSAG00000010898 transcript:EMLSAT00000010898 description:"maker-LSalAtl2s726-augustus-gene-0.7")

HSP 1 Score: 89.7373 bits (221), Expect = 2.976e-22
Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 0 
Query:   65 LFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYD 194
             F    G ++ T C D  E  C    GS    C+  +FQ++CP++CGIC AKC+D NG C  + ++  F   + +ECPK+CA CD CEDLI    C    + C  +  ++Y+CRK C  C+  CN+A  D
Sbjct:   12 FFQGINGKITETECVDDSEQVCQRQEGS----CYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDC-LNTYMRYACRKTCLYCEDPCNDAGND 136
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000006239 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295:2068:-1 gene:EMLSAG00000006239 transcript:EMLSAT00000006239 description:"maker-LSalAtl2s3409-augustus-gene-0.1")

HSP 1 Score: 88.5817 bits (218), Expect = 9.502e-22
Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 0 
Query:   60 LLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDD 195
            +L  C F    GI+    C D  +  C       +  CF+   QYTCP++CG+C+  C+D NG C+ +  +      +  ECPK+CA CD CEDLI    CE+  + C+    ++Y+CRK C  CK  CN+    D
Sbjct:    7 VLIACFFRGINGIVLEMECLDDSKRSCEGK----ENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECAL-KKMKYACRKSCKYCKDACNDVGSHD 137
[Close]
BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Match: EMLSAP00000002186 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1400:29785:30148:-1 gene:EMLSAG00000002186 transcript:EMLSAT00000002186 description:"maker-LSalAtl2s1400-augustus-gene-0.1")

HSP 1 Score: 85.8853 bits (211), Expect = 1.186e-21
Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 0 
Query:  106 CPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLC 184
            CP+ CG+C A CRD   +C   S E C +  I  +CPKSCA CD+CEDLI+ + C    +RC  D SVQY+CRK C LC
Sbjct:    2 CPEQCGVCQASCRDTGASCLEHS-ESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYTHRCEEDTSVQYACRKTCELC 79
[Close]
BLAST of EMLSAG00000006643 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 99.3673 bits (246), Expect = 7.248e-23
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 0 
Query:   60 LLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQAR 204
            +L  C F    G++SNT C D  ++ C+S  G     C   +  YTCP++CG+C A C+D N  C+ +  +      ++N CPK+CA CDECEDLI    CE+ K+ C+ D +++Y CRK C  C+  CN+   D+ +C+ + +R
Sbjct:    7 VLIACFFQGINGLISNTLCVDNSKSVCNSLQGQ----CNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAED-NMKYVCRKSCKYCEDTCNDVASDE-LCKSHVSR 145
[Close]
BLAST of EMLSAG00000006643 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 62.003 bits (149), Expect = 1.226e-8
Identity = 47/150 (31.33%), Postives = 76/150 (50.67%), Query Frame = 0 
Query:   53 NRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQ 202
            NRVLI+  +SF  F        N+TCE+  E     S  ++   C +  + + C KSCG C++ C D +  C  +   +C +     EC ++C  CD CEDL+    C  +KN C+ + +V+Y C   C LC+ +C +    + VC  ++
Sbjct:    3 NRVLII--ISF--FLVVVNGQGNSTCENEME-----SCETNTFKCMNPEYYFKCKKSCG-CESACTDTSIKCINNP-NKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCN-NGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFK 140
The following BLAST results are available for this feature:
BLAST of EMLSAG00000006643 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006643 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592880424|gb|GAXK01077477.1|4.163e+035.56TSA: Calanus finmarchicus comp427153_c0_seq1 trans... [more]
gi|592889986|gb|GAXK01068389.1|6.213e+032.10TSA: Calanus finmarchicus comp17248_c0_seq2 transc... [more]
gi|592867997|gb|GAXK01089565.1|6.819e+028.23TSA: Calanus finmarchicus comp421231_c0_seq1 trans... [more]
gi|592947882|gb|GAXK01010671.1|7.872e+035.29TSA: Calanus finmarchicus comp2643362_c0_seq1 tran... [more]
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BLAST of EMLSAG00000006643 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 21
Match NameE-valueIdentityDescription
EMLSAP000000066432.320e-155100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789... [more]
EMLSAP000000033751.472e-7776.92pep:novel supercontig:LSalAtl2s:LSalAtl2s1851:1679... [more]
EMLSAP000000122099.371e-7072.44pep:novel supercontig:LSalAtl2s:LSalAtl2s8853:989:... [more]
EMLSAP000000052922.105e-6263.87pep:novel supercontig:LSalAtl2s:LSalAtl2s282:38031... [more]
EMLSAP000000038394.184e-4673.96pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:6... [more]
EMLSAP000000059751.527e-3237.11pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068... [more]
EMLSAP000000059748.636e-2747.00pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:... [more]
EMLSAP000000108982.976e-2239.23pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203... [more]
EMLSAP000000062399.502e-2236.03pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295... [more]
EMLSAP000000021861.186e-2151.90pep:novel supercontig:LSalAtl2s:LSalAtl2s1400:2978... [more]

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BLAST of EMLSAG00000006643 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006643 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006643 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|225712722|gb|ACO12207.1|7.248e-2337.93ZK643.6 precursor [Lepeophtheirus salmonis][more]
gi|290462093|gb|ADD24094.1|1.226e-831.33protein ZK643.6 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000006643 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3671supercontigLSalAtl2s3671:6789..7712 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s3671-snap-gene-0.3
Biotypeprotein_coding
EvidenceIEA
NoteZK643.6 precursor [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000006643 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000006643EMLSAT00000006643-702490Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s3671:6789..7712-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000006643-689409 ID=EMLSAG00000006643-689409|Name=EMLSAG00000006643|organism=Lepeophtheirus salmonis|type=gene|length=924bp|location=Sequence derived from alignment at LSalAtl2s3671:6789..7712- (Lepeophtheirus salmonis)
AGAAATAAATATATAGAGTCAATTCATGCAAAATATTTATATTTCTACGC
GGTACTACGATACGTCATTTTCCAAACATATGTAAACATACAAGTTGTAT
TTTATAACAATTTGTCAATTTACAAACACTTTTCAAAATCAAGAGACATG
GAAACAAACCGAGTACTGATCCTACATTTATTGAGCTTCTGCTTATTTCA
TCAATGTTTTGGAATTTTGTCGAGTAATTAGAAGGACTTTTGTACATCTT
GGNCGAGTAATTAGTAAGACTTTTGTACATCTTGGAGTTTACAATCCAAT
ATTCTTTTATCTTTTAGACACTACCTGTGAAGATACCGATGAAACCTACT
GTCATTCATCAATAGGTTCTAGCAAAGAATCTTGCTTCGACGCTGCGTTT
CAGTACACTTGCCCTAAATCTTGTGGTATTTGTGATGGTAAAATATATTA
TACATATTCATCTATAGCTGCATTCTTATGATTAATATCATGTATCCTTC
CATTCACTCAGCTAAATGTAGAGATAATAACGGTGCTTGCTATAGAGATT
CTATAGAGGAATGCTTTGAACCTCAAATTGCAAATGAATGTCCGAAATCG
TGTGCCGGATGTGATGGTTAGTATCAAAGTTGTTTGTCGTGTATCCATTA
ACTAATTAAATTATTTTATAAATAGAATGCGAGGACCTGATTTCTATTGA
ATTTTGTGAATCGATTAAAAATCGATGCAGCACGGATGCTTCAGTTCAAT
ATTCTTGTAGAAAAMCCTGCCACTTATGCAGTAAGCTTATTACTTATTAT
TATCTTACCATATAAATTGTCCATTTGAATTATAGAGAGTAATTGTAATA
ATGCATATTATGATGACACCGTTTGTGAAGAATACCAAGCTAGAGACATG
ATGAACTTCGTTCAACAAAAATGA
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