EMLSAG00000006900, EMLSAG00000006900-689666 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000006900
Unique NameEMLSAG00000006900-689666
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Match: gi|592793374|gb|GAXK01161194.1| (TSA: Calanus finmarchicus comp34475_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 79.7221 bits (195), Expect = 2.661e-14
Identity = 117/430 (27.21%), Postives = 212/430 (49.30%), Query Frame = 0
Query:  173 YIQQLENIIVDKDYEIT-----------------LAEEKIANYEKKENERSSIDEKLSS---TSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLL-SDKELEISSLQKEVKHL--IQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKI----SQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKX---ESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNIS-DDSLQKSMLEADES 571
            YI++LE+IIV+K+Y+I+                 +  +K  N E+   E+  ++ KL     T + LK  ++EL      N E+    +K+   RD    DL   +    +S  ++   +DE  +L  S KE+E  SL K +++   ++TD      +D    ELKVL+   K   ++ ++   +  K  E   +I  L +   +   E N +++LK ELDSK+ E +++ +K+    S L +K  + SQLSE   ++  L+ ++ +K  +I + +  R+  M  Y   FK K+ EI  +K    E   + +++ +++PTK      L+ +L +    +   +E++     +  E Q + LK+E+  L+ Q+     +H RE+ + K  N KVI EYK+ N+ LQ+++ +  +   D       LEAD+S
Sbjct: 4059 YIKELEDIIVEKEYKISELENVSDEVDNVVPQSDIGADKFKNLEE---EKCKLETKLKGELETQKLLKIQVEELTVKVAENAEMMAHHEKMKQHRD----DLEKRVVECEKSSRQLATVEDELRELKDSKKEVE-ESLAKTLENGAKLKTD------LDEAKDELKVLKRATKTGAKDAQEVHEVKSKNDELLKEISRLSSVATANRGENNALDVLKSELDSKSKEISQIQEKVEHLRSDLGAKDKEISQLSE---RVEILQADVDAKEYDITKTKEDRDKLMEHYEMIFKKKQSEIDSIKALDREKGSLGEIMAKATPTKQ--TGELREKLARSEADLSEFKEKL-----LKEEDQVSELKNELKVLQKQMDTKTAQHEREVNRTKLANQKVIAEYKETNKVLQRRVEIVVDSPRDHDTTSPTLEADDS 5276          
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Match: gi|592794359|gb|GAXK01160209.1| (TSA: Calanus finmarchicus comp143331_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 1.352e+0
Identity = 94/348 (27.01%), Postives = 165/348 (47.41%), Query Frame = 0
Query:  139 IEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYE-------KKENERSSIDEKLSSTSEEL----------KKTIKELD---------KYKIVNEELEKSL-------KKIHDERD-RKEKD--------LNDEIESLRQSKV----KIKASDDE-KTKLLSDKELEI------SSLQKEV----KHLIQ-------TDVANRQMIDNQNSELKVLEVQIKKLNEET-----KDCKVLGK---KIGEQQNQIDSL--------------KNQLNSKEREENMIEILKEELDSKNLEKN----KLLDKISQLESKVIDASQL 396
            IE++  +  ELK    K +  IS L  K+ ++   IQ+L+  +++KD  +  +EEK A  E       KK  ++S ++ +L    E+L          +K +++ D         KY + N  LE+ L       +K++ E+D R++KD        +++ I++L+  K+    ++K  D + KTK  + KELE       S+L+ E     KH ++         V     +D +N +++ L   I+ L EE      +D KV+GK   +IGE +N++D L              KN +  K++E+  ++I+  E D    EKN    KL  KI +L +K+I+  +L
Sbjct:  654 IEEIKVKDEELK----KKEVSISDLTEKLSKSEKLIQELQKTLIEKDKSLVRSEEKNARLEGKISWLSKKRPQKSDVENRLLKAEEDLEKIQDDKQKIEKVLEQRDDEVARLEEQKYFLENSLLERQLEVKKKDEQKMYLEKDVREQKDHFEKQLREMHEGIKTLKSEKISFQKEMKDVDKQMKTKTHNIKELEAALAKNDSTLKDEKSTKEKHSLKIRQLNEAAKVTEEYKLDLEN-KIQELNTTIQNLQEENNTIILEDLKVIGKGREEIGELKNKLDELEVEIETLEEAKEAFKNNMTGKDQEQISLQIIVSEKDEVIFEKNKSIEKLRKKIEKLRTKLIETDEL 1682          
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Match: gi|592794360|gb|GAXK01160208.1| (TSA: Calanus finmarchicus comp143331_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 6.574e+0
Identity = 86/327 (26.30%), Postives = 154/327 (47.09%), Query Frame = 0
Query:  160 ISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYE-------KKENERSSIDEKLSSTSEELKKT-----------------IKELD--KYKIVNEELEKSL-------KKIHDERD-RKEKD--------LNDEIESLRQSKV----KIKASDDE-KTKLLSDKELEI------SSLQKEV----KHLIQ-------TDVANRQMIDNQNSELKVLEVQIKKLNEET-----KDCKVLGK---KIGEQQNQIDSL--------------KNQLNSKEREENMIEILKEELDSKNLEKN----KLLDKISQLESKVIDASQL 396
            IS    ++ ++   IQ+L+  +++KD  +  +EEK A  E       KK  ++S ++ +L  + E+L+K                  +  L+  KY + N  LE+ L       +K++ E+D R++KD        +++ I++L+  K+    ++K  D + KTK  + KELE       S+L+ E     KH ++         V     +D +N +++ L   I+ L EE      +D KV+GK   +IGE +N++D L              KN +  K++E+  ++I+  E D    EKN    KL  KI +L +K+I+  +L
Sbjct:  726 ISDFTERLSKSEKLIQELQKTLIEKDKSLVRSEEKNARLEGKISWLSKKRPQKSDVENRLLKSEEDLEKMQDEKQKIEKVLEQRDDEVARLEEQKYFLENSLLERQLEVKKKDEQKMYLEKDVREQKDHFEKQLREMHEGIKTLKSEKISFQKEMKDVDKQMKTKTHNIKELEAALAKNDSTLKDEKSTKEKHSLKIRQLNEAAKVTEEYKLDLEN-KIQELNTTIQNLQEENNTIILEDLKVIGKGREEIGELKNKLDELEVEIETLEEAKEAFKNNMTGKDQEQISLQIIVSEKDEVIFEKNKSIEKLRKKIEKLRTKLIETDEL 1703          
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000006900 (pep:novel supercontig:LSalAtl2s:LSalAtl2s390:414906:420715:1 gene:EMLSAG00000006900 transcript:EMLSAT00000006900 description:"augustus_masked-LSalAtl2s390-processed-gene-3.6")

HSP 1 Score: 1431.77 bits (3705), Expect = 0.000e+0
Identity = 736/736 (100.00%), Postives = 736/736 (100.00%), Query Frame = 0
Query:    1 MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEALLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFENVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEKKENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRRKYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS 736
            MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEALLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFENVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEKKENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRRKYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS
Sbjct:    1 MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEALLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFENVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEKKENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRRKYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS 736          
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000006390 (pep:novel supercontig:LSalAtl2s:LSalAtl2s350:207605:212969:1 gene:EMLSAG00000006390 transcript:EMLSAT00000006390 description:"maker-LSalAtl2s350-augustus-gene-2.6")

HSP 1 Score: 105.916 bits (263), Expect = 1.432e-23
Identity = 69/168 (41.07%), Postives = 113/168 (67.26%), Query Frame = 0
Query:  211 KLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNK 378
            +L +TS E+   + +L+K + + E+  K LKK+ +E++R EKDLNDEIE+LR+SK+KI++S+ EK  LLSDKE+EI  L+KE+K+LIQ  VAN+Q +++ + E+++L                      E+QN I++L+ Q+ S ++E+N+I+IL++EL  K  E +K
Sbjct:  811 RLDTTSSEVDGLLIKLNKTRQLYEDQGKILKKVEEEKNRLEKDLNDEIETLRRSKIKIESSEHEKKNLLSDKEIEIQKLEKEIKNLIQKGVANQQSLEHNSKEIEILR-----------------SDASEKQNIIENLEVQIKSSQKEDNVIKILRKELKLKEYELSK 961          

HSP 2 Score: 80.4925 bits (197), Expect = 9.993e-16
Identity = 134/443 (30.25%), Postives = 228/443 (51.47%), Query Frame = 0
Query:  334 LGKKIGEQQNQIDSLKNQLN-SKEREENMIEILKEELDSKNLEKNKLLDKISQLE-SKV-IDASQ------LSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVI------IRSSPTKNNVASSLKNELE-------KKGXTIKILEEQVQQSL-DVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSN--ISDDSLQ---KSMLEADESLNV-----SVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLS--VRKPRRKYVNMEDNFK----ETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDL-----EESNSSPHTIVKRQLRARKK 732
            L K++    +++D L  +LN +++  E+  +ILK+  + KN  +  L D+I  L  SK+ I++S+      LS+ +++I  LE+EI  KN   +   NQ         ++ +   +EI  L+ +++  +++I      I+SS  ++NV   L+ EL+       KK   I+ +E ++++SL D  VE   +  + EI+SLK  + +AN  HS+E +KIK+ N KVI EYKDAN+ELQKQ+G+ SN   +DDS Q   + M E+D+S  +       E+ +  K K++G+VR+ +  S    +S+   ++        ++N E      EN    ++ S+++T S  V K ++K VN  D        +  K R+TLK   + +     +   P     T     N  + EV   +++L     EE  +S   + KRQLR RKK
Sbjct:  808 LRKRLDTTSSEVDGLLIKLNKTRQLYEDQGKILKKVEEEKNRLEKDLNDEIETLRRSKIKIESSEHEKKNLLSDKEIEIQKLEKEI--KNLIQKGVANQ---------QSLEHNSKEIEILRSDASEKQNIIENLEVQIKSSQKEDNVIKILRKELKLKEYELSKKEAIIREVELKLEKSLYDGEVE---DLPRDEIESLKRDVIQANAYHSKEFDKIKKANEKVINEYKDANKELQKQVGICSNRDTADDSSQLVHQQMNESDQSFKIDSSILPTELQASGKKKRRGKVRNTQNNSTKCNNSSSILVN--------ESNVENELNDSENSVSRSQKSNKVTRSRPVHKTKKKNVNDVDRSSISELSSVEKERNTLKETHSFEFLHSGTENTPRRSNRTTNNN-NFRQYEVLKSLENLTEIEEEEERASQSFVGKRQLRTRKK 1227          
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000000304 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:4576:5080:-1 gene:EMLSAG00000000304 transcript:EMLSAT00000000304 description:"maker-LSalAtl2s1044-augustus-gene-0.32")

HSP 1 Score: 90.1225 bits (222), Expect = 9.330e-21
Identity = 52/111 (46.85%), Postives = 86/111 (77.48%), Query Frame = 0
Query:  211 KLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQI 321
            +L STS E+   + +LDK + + E+ +K LKK+ +E++R +KDLNDEIE+LR+SK+KIK+S+DEK K+LS+KE EI +L+KE+K+L++  +AN+Q +++ + E++ L   I
Sbjct:   13 RLDSTSSEVNGLLIKLDKTRQLYEDQDKVLKKVEEEKNRLDKDLNDEIETLRRSKIKIKSSEDEKKKILSEKENEIQNLEKEIKNLMKKGIANQQSLEDNSKEIQNLRCDI 123          
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000000301 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:3402:4048:-1 gene:EMLSAG00000000301 transcript:EMLSAT00000000301 description:"snap_masked-LSalAtl2s1044-processed-gene-0.17")

HSP 1 Score: 70.4774 bits (171), Expect = 7.108e-14
Identity = 40/86 (46.51%), Postives = 61/86 (70.93%), Query Frame = 0
Query:  500 ENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSN--ISDDS---LQKSMLEADESLNVSVEISS 580
            E+ L+ EI+SLK  +++AN  HS+E++KIK+ N KVI EYKDAN+ELQKQ+G+ SN   ++DS   + + M ++D+S  +   I S
Sbjct:    6 EDLLRDEIESLKRDVTQANANHSKELDKIKKANDKVIIEYKDANKELQKQVGICSNRDAAEDSSQLIHQQMNKSDQSFKIDSSIIS 91          
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000006410 (pep:novel supercontig:LSalAtl2s:LSalAtl2s350:759416:762862:1 gene:EMLSAG00000006410 transcript:EMLSAT00000006410 description:"maker-LSalAtl2s350-augustus-gene-6.33")

HSP 1 Score: 66.2402 bits (160), Expect = 9.437e-13
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0
Query:  500 ENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSN--ISDDSLQ---KSMLEADESLNV-------SVEISSKIKTKKKGR 589
            E+ L+ EI+SLK  + +AN  HS E++KI++ N KVI EYKDAN+ELQKQ+ + SN   +DDS Q   + M ++D+S  +        ++IS K K K K R
Sbjct:   12 EDLLRDEIESLKQDVIQANIYHSMELDKIRKANEKVINEYKDANKELQKQVCICSNKDKADDSSQLVYQQMNKSDQSFKIDSSIQSAGLQISGKNKMKSKVR 113          
BLAST of EMLSAG00000006900 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold421_size176100-snap-gene-0.31 (protein:Tk10559 transcript:maker-scaffold421_size176100-snap-gene-0.31-mRNA-1 annotation:"golgin subfamily a member 4-like")

HSP 1 Score: 75.485 bits (184), Expect = 3.553e-14
Identity = 86/315 (27.30%), Postives = 158/315 (50.16%), Query Frame = 0
Query:  441 EISRLKXESTRIRDVIIRSSPTKNNVAS------SLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDD-------SLQKSMLEADESLN---VSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLS--VRK-PRRKYVNMEDNFKETPRKGRST---LKNVGNSDISIDNSIPIPTP--RRSTRKTLYNPGKL-EVFSPVQDLEESNSSPHTIVKRQLRAR 730
            E++  K E  ++R+V+ RS+P K ++++       L+ EL KK   IK LE  +    ++   + E   K E+ +L+ ++      H +E+ +IK+ +   ++EY+  N EL +Q+G     +             S +E D+S N   +  E  +  + +++G   +  +  R + + T     S +     D+  E   + DE  P   + S+++T +  VRK  RR +  ++++  ET R G S    LK++ N D++ ++S+   TP    S ++TLY   K+ +VF+P  +   S  +P TIVKRQLR+R
Sbjct: 1077 ELAMEKRECHKLREVMSRSTPNKASISARETEVTMLREELMKKTEVIKNLEVMIPTRKELTYSSDEEDFKKELGNLQKEMMVLKASHEKEMLRIKKASDMALEEYRHTNSELLRQMGRPPPTASSSASSSFVGTDPSAIEGDDSQNDNSLIEETPNNSRKRRRGGQTARERSRRAAANRTGDKTDSATQASFEDSTLENDPDFDEERP---KRSTRLTRAKPVRKAARRDHSALDESGSET-RPGTSASSVLKDLNNLDVN-NSSVEHHTPSNNSSRKRTLYKSSKVAQVFTPPAEEPMSTLTPKTIVKRQLRSR 1386          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000006900 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006900 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592793374|gb|GAXK01161194.1|2.661e-1427.21TSA: Calanus finmarchicus comp34475_c3_seq1 transc... [more]
gi|592794359|gb|GAXK01160209.1|1.352e+027.01TSA: Calanus finmarchicus comp143331_c0_seq2 trans... [more]
gi|592794360|gb|GAXK01160208.1|6.574e+026.30TSA: Calanus finmarchicus comp143331_c0_seq1 trans... [more]
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BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000069000.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s390:41490... [more]
EMLSAP000000063901.432e-2341.07pep:novel supercontig:LSalAtl2s:LSalAtl2s350:20760... [more]
EMLSAP000000003049.330e-2146.85pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:4576... [more]
EMLSAP000000003017.108e-1446.51pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:3402... [more]
EMLSAP000000064109.437e-1344.12pep:novel supercontig:LSalAtl2s:LSalAtl2s350:75941... [more]
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BLAST of EMLSAG00000006900 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006900 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006900 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006900 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold421_size176100-snap-gene-0.313.553e-1427.30protein:Tk10559 transcript:maker-scaffold421_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s390supercontigLSalAtl2s390:414906..420715 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s390-processed-gene-3.6
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000006900 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000006900EMLSAT00000006900-702747Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s390:414906..420715+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000006900-689666 ID=EMLSAG00000006900-689666|Name=EMLSAG00000006900|organism=Lepeophtheirus salmonis|type=gene|length=5810bp|location=Sequence derived from alignment at LSalAtl2s390:414906..420715+ (Lepeophtheirus salmonis)
AAGTGAATGAAAAGATTTGAATGAAAAAGGAGGGATTTGATTCGACTTGG AGTTGCTACACAGTTCTTAGTTGAGAGTTGGTGGTTGTCGCTTGTGGGAG TTCTCTTGGAGTGAGTGGATAAAGAGGAAAAAATATGGAGAAGGGATCGC CKCCATCCATTTCTTCAGAGACTGGAGTGGAGAAGAAGCCGAGGGGCCTC CGGGTCTACGCGCGCCTCAAACCCCGACTGGAAGAGGAGGAGGAAGAAGA ATTCCGGAATGTGAAGACCCGTTTTACTTATATGAAGAATGAGATCTTGA CGGATCCCCAAGGAGGAGTGGATTTCAGTCAACACTTTGAATTTACCCGG ATTTTCGCTCCGAACGTGGACCAGTCCTCTTTTTTCCGTGAGATGGTCCT TGAGAGACTGGAGGCCTTTTTGTCGGGGGAGAACCAGTTGATCTTCACGT ATGGAGCCACGTCCMCGGGAAAGKCTTTCACTGTGCAAGGCKCTCCTGCC AGTCCTGGGATTTTGCCGCGCTCTCTGGATCTCATCTTTAATTCCCTTGG AGTAGAGCGCTTTCTGGATCGGAGTCCCCTTCTGCCCCACGGCTTCGACT CCGTCCAGATTTCCGCGTGTCATGATAAGTTGGAGCGAGAGAAGAAGGAA GTGCTGAGCCTGGGGCGGTTTCTGAATACTCAAGTGGAGGCGGAGYGMGA ATCCGGGCTGAGTGAGTGCGACAGCATCTGTACGGACGTGAGMGCTCAGA GTCTGGCCACCATGTTTCCGAGTCTTGGACATCGAGAAAGAGAAAATACT AAAGTGAGTAAGGTGGATCGAGAAGGAGTCTACTATTCATTATGGGTTTC CTTTGCGGAAATATATAACGAAAACATTTATGATCTTTTCCAAAAAATAC CTTTGCCATCCAATAAAGAAAAGGTGAGAAGATTACCTCTAAAATTAGCT GAAGATCGGAAGGGAAGTATATATATAAAAGGTCTGAAAGAAGTTCAAGT CTCCTCTGCGGACGAGGCCTACCAACTTCTCTTAATTGGTAGAAAGAATC TGCAATTTGCTGCCACGAAACTCAATCATAACTCCTCAAGAAGTCATTGT ATTTTTACCATTAAAATGATGAAATTTTGTGATAGCAATGAACCAAAATA TGGTCGTGTTAGTATTTTATCTTTTTGTGACTTGGCAGGSTCTGAGCGTA WTTAAAAAAACTCAAAATGATTTAAAAAGACAGAAAGAAACTGGGAACAT AAATACTTCACTTCTCGTGTTGGGACGTGTCATGAAGGCGTTGAGAGATA ATCAATACATAAAGGATTTGAAAAAACATTCTGTCGTTCCCTTTCGAGAC TCAAAGCTTACTCGTTTACTACAGGTTTTCTTCAAAGGACTGGGACAGGC ATCTATGATAGTGAACATAAGTCAAGCTCCATATCTATTTGATGAAACTC TTCAGGCTCTTAAATTCGCTGCGATTACCAGTAAAATTAAGTATGTTAGA GAATTTAAAACACCGAAGTCTAAGAGAAGGTCAACATTTTCTTCCATTTT ATTTGAGCATAAGAGAACATCTAATTTATTTGGAAGAGGCTCTATTGCTT GGGAAAATCCTATAATAAGTTCAACAATACAACATCCACAGATATTAAAT GAAGAAACAGAAGAACATGAACAAGAGGATGAATCATCCCTGATAAGCAA TTCTTGCCCAGATCAGTTTGAAGCACTTACTGATCTAGTCACTCAGCTAA GGCAAAGACTAAATGAAGAGATGGATAAAAATATGACTCTAGAGACTGAA ATTCGATCTGAATTATGTAGTAAATTTGATACAATGATGCTTCAAAATGA ACAACAATGGCAAAAACGTCTCCAAGAATCAACGGATCGTATTGAAAATC TTAGCTCATGGAGAATTACTCAGTTAGAGAATGCCTACAATGAGTGTCGC AAACGTAAAAGGTATGAACAAACGGATGAAGATAATTCAAATCGTATTGC CACATTAGAAACTGCACTTGATGTTAAAATTACTGAACTTGGAGAAAGTG ATAAACAGTTTAAGGCAATGAAAGAAACGTATAATTCTCTACTTAGCGTA AAACAAAAACTTCAAGAAGACCTTACGTTTTTTAAATTTGAAAATCAAAG CTTCAAAACGAGAATACAGCGTTTAGAAGATAAAAATATTGCACTTTCTC AAGAGAATAAGAGTAAAGACTTAGCAATTGAGTCTATGTCCACGAAACCC ATACTAATTGATTTGAGAAACCAGTTAAGTGATACTAAAAATAAACTCTC AAAAAAGAATGAGGAGGTGTCTTACTTTAAAAAGCTTTTAGATGAAGCTG GGGAAGAATTTATAGCTAAGGATGATGAATTGCAGAAGATGACTTTGGAT ATAAGCTCGTTAAGGGTAATATTAATAAAAATTTCACTTGTAAATTTATT ATATTTGTTTTATTTTTAGACTGAATGCACTAAGTTAACACTGGCATTAA GAGACGCACAGCACGAATACTCTATTCTTATTTCTGAGTCTAATCATCGT CAAGAAGAGAAAGAAAATTTAGAAGAACAAGTGATAAACTTTCGTACGGA GGTTACGGAGTTACTTGCTGAAAAATCTAACTTGATTTTGGAGCTAAGTA ATCTTAAAAAAGAAAAATTAACTAGTGGTCAGAAACTTGAACGTAATGTG ATATTAAAAGATTCTGAAGAGAATGAAAAAGAACTCAATCGAAGAATATT GNAAACTTGAGGATGAAAATCGTACTATCAAAGAGGATTTTGAACTTTTC AAAGATAAAGCAGAATTGAGAATTGAAGATTTTCAAATAACGTTACAAAA CGCTATGGACACTTCAGAAGCTCTTCTAGCAAAGAACAARGAATTGAAGT CCAAAATTAGTCTACTGGAGTCTGAAGTTAGTGTCTTGGGTTCACTCTCC TCTCCTTGTGGCAAAGAGAGACAAAAAGATATTTTACCGGACATGTCTGT TCTTGAAACTAAAGAATTTGAGAATGTTGAACACAAGATAATAACTGAGG AACTCGACAATGTTAGAAAAGTACTTGAAGAGAAGGATACAATAATTAAG ACAAATAATAAATCTTTATCTGAAAGAGATAAAGAAATTGAAAAGGTACA TGCAAGAATTTCTGAATTAAAATGTGGTCTGCATAAATCAGATAAGGAAA TTAGCTCATTAAATAATAAAGTGGAAGAAAATGCATCGTATATTCAACAA TTAGAAAATATAATCGTAGACAAGGACTATGAAATAACTTTAGCTGAAGA AAAAATCGCAAACTACGAGAAAAAAGAAAATGAGAGGAGTAGCATCGATG AAAAACTGTCTTCTACATCGGAAGAACTGAAGAAAACTATCAAAGAGCTT GATAAATACAAAATAGTTAATGAGGAGCTCGAAAAAAGTTTAAAGAAGAT ACATGATGAAAGAGACAGGAAAGAAAAGGATTTAAATGATGAAATCGAGA GTTTAAGGCAATCCAAAGTTAAAATCAAAGCCTCAGATGATGAAAAAACT AAGCTTTTGTCTGATAAAGAACTTGAAATTAGTAGCCTTCAAAAAGAAGT TAAGCATTTAATTCAAACAGATGTGGCAAACCGTCAAATGATAGACAATC AAAATTCAGAACTCAAAGTACTAGAAGTTCAAATTAAAAAGTTGAATGAA GAAACAAAAGACTGTAAGGTTCTTGGTAAAAAAATTGGAGAGCAACAAAA TCAAATCGACTCTCTCAAGAATCAGGTAATTTATTAATTTAGGTATTGAC ATATAAATTGACTGGTCCATATTTTATTTATTTCGCAGCTAAATTCAAAA GAAAGAGAAGAAAATATGATTGAGATCTTAAAAGAAGAGTTGGATTCCAA AAACTTGGAGAAGAACAAGTTATTAGATAAAATATCCCAATTAGAAAGTA AAGTCATTGATGCATCTCAGTTGTCTGAATTGCAATTGAAAATATCGCAC CTTGAGGAAGAAATCCACTCAAAAAATGAAGAAATACGTCAAGCACGTAA TCAAAGGGAGGCTACTATGTTCACTTACTCAAAGGCATTTAAAACCAAAG AAGAAGAAATATCTAGATTAAAGKAAGAATCTACTAGGATACGAGACGTT ATTATTAGATCCTCTCCCACAAAAAATAATGTGGCTTCATCATTGAAAAA TGAATTGGAGAAAAAAGGGGMAACCATTAAGATATTGGAAGAGCAAGTCC AGCAATCATTGTAAGATCGCTTTTGTGCTTGATTACTATTTTTCTCATCG AATTATTCATTGATCCTTCTTTTCTCTCTTTCTTTTTTAAGGGATGTCAA TGTAGAAACTCAGGAAAATTCTCTAAAAAGTGAGATTGACAGTCTTAAGT GTCAGATTTCAAGAGCCAACAATAAGCATTCACGTGAAATTGAAAAGATA AAAAGAACAAATGGTAAAGTTATTCAAGAGTATAAGGATGCCAATCGCGA ACTACAGAAGCAAATAGGATTAACATCTAACATATCCGATGATTCATTGC AAAAGAGCATGCTTGAAGCTGACGAGTCACTAAATGTTTCAGTTGAAATA TCGAGTAAAATCAAAACGAAAAAAAAAGGTCGAGTTCGTAGTGCTCGTAA AAAATCAAGGATTAGTGAATCATCAACCCTTTCTCCAATATCTTCTACTT CGGCGAAGGGCAATTTTGATAATAATACTGAGGAGGGCACTGAAGGAGAT GAAAATATTCCTTACAACACGCGCAATTCTAGTCAAATTACTCTGTCAGT TCGGAAACCTAGAAGAAAGTACGTTAATATGGAGGACAATTTTAAGGAGA CGCCACGTAAAGGACGAAGTACTTTGAAAAATGTTGGTAATTCTGACATA AGTATAGACAATTCCATTCCTATTCCTACACCGCGCAGATCAACTCGAAA GACGCTTTATAACCCTGGAAAACTAGAGGTACCTTTTTATTCTTTTAAAT GTTATTTTATGAAGTAGGAATTACTATTCTCTATTTTAGGTTTTTAGTCC TGTCCAGGATTTAGAAGAAAGTAATTCATCTCCTCACACGATAGTTAAAC GTCAGTTAAGAGCACGAAAAAAGAAGTTAGCTAGTTAAATATTTATTCCT GTTTGCCATACTTACATCAAATAAAAATGTACAAATATAAGTCAACGGAC ACGTCCACACAACGGGGTAATTGTGCTACTACAGCAGATTCTTAAACCTA GTTTACATTAAAATTTTGTTCAATGATATTTTACATTTCATAAATTTTAA AATACGAATTTGTTCGTTTTCCTCATTCATGGCTTAATGTCTCTCGTAAG ATAGGGTGGAGCNNTCCTGTTTGCCATACTTACATCAAATAAAAATGTAC AAATATAAGTCAACGGACACGTCCACACAACGGGGTAATTGTGCTACTAC AGCAGATTCTTAAACCTAGTTTACATTAAAATTTTGTTCAATGATATTTT ACATTTCATAAATTTTAAAATACGAATTTGTTCGTTTTCCTCATTCATGG CTTAATGTCTCTCGTAAGATAGGGTGGAGCATCTATTGATAAGATGGTCT GCACTTTGCAATTCTACCATACACACATTGGACGTTGAGCTTATGTACTT CAACTTGCTTGGGCGGGCTTGAAAAGGGCCATGCCCAGTGTATGCTTGAA CAATGAGTCCCAATTTTTCTCTTCCAAGCTTCATACACTTCCACTTAGGC TTATTAAGTATAGTATGTGTATGTTTCATACTTTGATATTTTCTATATCT GTCACACCAA
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