EMLSAG00000007203, EMLSAG00000007203-689969 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:CG18600 species:7227 "Drosophila melanogaster" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009668 Pfam:PF06870 EMBL:AE014297 GO:GO:0003677 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 KO:K03005 EMBL:AY061173 RefSeq:NP_650708.1 UniGene:Dm.1239 STRING:7227.FBpp0083015 EnsemblMetazoa:FBtr0083594 GeneID:42201 KEGG:dme:Dmel_CG18600 UCSC:CG18600-RA FlyBase:FBgn0038601 eggNOG:NOG131350 InParanoid:Q9VE94 OMA:IYMDALQ OrthoDB:EOG7CZK71 GenomeRNAi:42201 NextBio:827638 Uniprot:Q9VE94) HSP 1 Score: 63.929 bits (154), Expect = 7.728e-10 Identity = 82/362 (22.65%), Postives = 148/362 (40.88%), Query Frame = 0 Query: 1 MTKKATVESVSVQKIGSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNF------------ELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVD-----DGKLTPMSRDKALCHAIVLALLSSD 345 M K +ESV K P I KF +G+L+ + + V K ++Y+ + +K + TYI IRNK TNKV+++ PV A +V+ + T M R K+L+ +FG K RF ++M V+ + + E VN LN + + ++P N++AT +EVY ++++I + +E LE K + + + ++ ++K+ E+ +++ L + +I+Y+ L+ + + + + + +R +F D G T S +KAL H IV+ALL S+ Sbjct: 1 MEDKIIIESVCDHKRDENIPTILKFQNGSLLGDADFSMVESTVDG-----------------KKHALVYAGDQVYTGEVKDSEEVDTYIFIRNKLTNKVKVV--------PVQEALMYNHVY-KKLERQKRTGPTMSREHANKKLLKEFGGRKASRFVDNREQMMVNVEVMRQDL---DETVNSSMLNEDEEDGTLGDVSINNEEYLASIVPEFNKEATKVDEVYAVESLIPSSLLERLEEEAKVVFSTPVQTLPIKSEYLKSCLAKIQENPVSSKRDFLH----IKLIIYMDALQSLISLRSRQMQKAELSGITEKIENDIRH----RFADPNVAKKGTRTNFSSEKALTHFIVMALLLSE 325
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:POLR1E "Polymerase (RNA) I polypeptide E, 53kDa" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0009303 "rRNA transcription" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR009668 Pfam:PF06870 GO:GO:0005737 GO:GO:0003677 GO:GO:0030054 GO:GO:0009303 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 KO:K03005 CTD:64425 eggNOG:NOG301234 HOGENOM:HOG000035116 HOVERGEN:HBG053490 OMA:MEVYDAE OrthoDB:EOG73NG39 TreeFam:TF331685 GeneTree:ENSGT00390000018004 EMBL:DAAA02023177 EMBL:BC103202 RefSeq:NP_001029580.1 UniGene:Bt.49101 STRING:9913.ENSBTAP00000016250 Ensembl:ENSBTAT00000016250 GeneID:511587 KEGG:bta:511587 InParanoid:Q3SZ29 NextBio:20870002 Uniprot:Q3SZ29) HSP 1 Score: 59.3066 bits (142), Expect = 2.354e-8 Identity = 75/380 (19.74%), Postives = 164/380 (43.16%), Query Frame = 0 Query: 21 LIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKK--QLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRD----KALCHAIVLALLSSDYRIEFK--------------DLVSSVRVQVPKLKMLISCTG 372 L+ +F++G L P N++ + N + ++ L+ +TD++ Y ++KC + ++ I NKT+ ++ + + ++ P +F +ESV++ ST + + +K + FG K +R KV ++ +A AAEN+ + +L S+ + + + +PP + A E+VY ++++S E +AL++ + F +E L + + S ++E+L N + I Y+ + F K ++ +P+ + + K ++G L + D K + IVLAL + ++I+ ++ ++R+++ K K+ ++ G Sbjct: 24 LLVQFSNGRLQNPGNMR---FTLYKNNDSTNPRKRSQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQP---------LFSDESVESESTPESQAKSFREKMDSCIEAFGTTKQKRALNSRRMNKVGSESLNRAVAKAAENIIDTKGVTALVSDAIHDDLQDDSVCLPPCHADAAKPEDVYKFEDLLSPVEYDALQSPSEAF-RNVTSEEILKMIEENSHCSFVIEALKSLPSNEESRDRQARCIWYLDALIKFRAQKVIKRKSALGPGVPHIINTKLLKQFTCLTYNNGSLRNLISDSMKAKITAYVIVLALHINGFQIDLTMLQRDLKLSEKRMMEIAKAMRLKISKRKVSLAAGG 390
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:POLR1E "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR009668 Pfam:PF06870 GO:GO:0003677 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 KO:K03005 CTD:64425 OrthoDB:EOG73NG39 GeneTree:ENSGT00390000018004 EMBL:AAEX03007968 RefSeq:XP_531998.2 Ensembl:ENSCAFT00000003730 GeneID:474767 KEGG:cfa:474767 Uniprot:F1PJ44) HSP 1 Score: 58.9214 bits (141), Expect = 3.632e-8 Identity = 82/404 (20.30%), Postives = 174/404 (43.07%), Query Frame = 0 Query: 21 LIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRD----KALCHAIVLALLSSDYRIEF----KDLVSSVR--VQVPK-LKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRR 405 ++ +F++G L P N++ + +N + ++ L+ +TD++ Y ++KC + ++ I NKT+ ++++ + ++ P +FA S L + A + + MD + FG K +R V ++ +A AAEN+ + +L ++ + + + +PP + A E+VY ++++S E EAL++ + F +E L + + S ++E+L + + I ++ + F K ++ +P+ + + K+ ++G L + D K + I+LAL SD++I+ +DL S R +++ K +++ IS + L +PL +K KRR Sbjct: 24 VLVQFSNGKLQNPGNVR---FTLYKSNDSTNPRKRSQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMQVYDAELFNMQP-LFADESLESDLTQESQAKTFREKMD------SCIEAFGTTKQKRALNSRRMNTVGSESLNCAVAKAAENIIDAKGVTALVNDAIHDDLQDDSLYLPPCHADAAKPEDVYKFEDLLSTAEYEALQSPSEAF-RNVSSEEILKMIEENSHCSFVIEALKSLPSDEKSRDRQARCIWFLDTLIKFRAQKVVKRKSALGPGIPHVINTKLLKHFTCLTYNNGSLRNLISDSMKAKITAYVIILALHISDFQIDLTMLQRDLKLSERRMIEIAKAMRLKISKRKVSLAAGREEDHKLGTLSIPLPPAQTSKHQSKRR 416
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:POLR1E "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009303 "rRNA transcription" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] InterPro:IPR009668 Pfam:PF06870 GO:GO:0005737 GO:GO:0005730 GO:GO:0003677 GO:GO:0030054 GO:GO:0009303 GO:GO:0003899 OMA:MEVYDAE TreeFam:TF331685 GeneTree:ENSGT00390000018004 EMBL:AAEX03007968 Ensembl:ENSCAFT00000049125 Uniprot:J9NVK4) HSP 1 Score: 58.9214 bits (141), Expect = 3.714e-8 Identity = 83/404 (20.54%), Postives = 173/404 (42.82%), Query Frame = 0 Query: 21 LIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRD----KALCHAIVLALLSSDYRIEF----KDLVSSVR--VQVPK-LKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRR 405 L +F++G L P N++ + +N + ++ L+ +TD++ Y ++KC + ++ I NKT+ ++++ + ++ P +FA S L + A + + MD + FG K +R V ++ +A AAEN+ + +L ++ + + + +PP + A E+VY ++++S E EAL++ + F +E L + + S ++E+L + + I ++ + F K ++ +P+ + + K+ ++G L + D K + I+LAL SD++I+ +DL S R +++ K +++ IS + L +PL +K KRR Sbjct: 82 LTVQFSNGKLQNPGNVR---FTLYKSNDSTNPRKRSQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMQVYDAELFNMQP-LFADESLESDLTQESQAKTFREKMD------SCIEAFGTTKQKRALNSRRMNTVGSESLNCAVAKAAENIIDAKGVTALVNDAIHDDLQDDSLYLPPCHADAAKPEDVYKFEDLLSTAEYEALQSPSEAF-RNVSSEEILKMIEENSHCSFVIEALKSLPSDEKSRDRQARCIWFLDTLIKFRAQKVVKRKSALGPGIPHVINTKLLKHFTCLTYNNGSLRNLISDSMKAKITAYVIILALHISDFQIDLTMLQRDLKLSERRMIEIAKAMRLKISKRKVSLAAGREEDHKLGTLSIPLPPAQTSKHQSKRR 474
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:POLR1E "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009303 "rRNA transcription" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] InterPro:IPR009668 Pfam:PF06870 GO:GO:0005737 GO:GO:0005730 GO:GO:0003677 GO:GO:0030054 GO:GO:0009303 GO:GO:0003899 OMA:MEVYDAE OrthoDB:EOG73NG39 TreeFam:TF331685 GeneTree:ENSGT00390000018004 EMBL:CU137689 Ensembl:ENSSSCT00000029263 Uniprot:I3LJI4) HSP 1 Score: 58.151 bits (139), Expect = 6.029e-8 Identity = 65/304 (21.38%), Postives = 136/304 (44.74%), Query Frame = 0 Query: 60 LSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNES-VDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRD----KALCHAIVLALLSSDYRIEF 350 L+ +TD++ Y ++KC + ++ I NKT+ ++ + + ++ P+ R++ FL S V LS ++ MD + FG K +R KV ++ +A AAE++ + +L S+ + S+ + +PP + A E+VY ++++S E +AL++ + F +E L + + S ++E+L N + I ++ + F K ++ +P+ + + K+ ++G L + D K + I+LAL +D++I+ Sbjct: 26 LAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAEMFNMQPLFTGRDTVASFLRRSAVTELSLAQ-MD------SCIEAFGTTKQKRALNSRRMNKVGSESLNRAVAKAAEDIIDSKGVTALVSDAIHSDLQDDSLYLPPCHADAAKPEDVYKFEDVLSPAEYDALQSPSEAF-RNVTSEQILKMIEENSHCSFVIEALKSLPSNQESRDRQARCIWFLDTLIKFRAQKVIKRKSALGPGIPHVISTKLLKHFTCLTYNNGSLRNVISDSMKAKITAYVIILALHINDFQIDL 321
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:Polr1e "polymerase (RNA) I polypeptide E" species:10116 "Rattus norvegicus" [GO:0001054 "RNA polymerase I activity" evidence=IBA] [GO:0001179 "RNA polymerase I transcription factor binding" evidence=ISO] [GO:0001189 "RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=ISO;IBA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0009303 "rRNA transcription" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] InterPro:IPR009668 Pfam:PF06870 RGD:1565773 GO:GO:0005737 GO:GO:0003677 GO:GO:0030054 EMBL:CH473962 GO:GO:0009303 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 KO:K03005 CTD:64425 eggNOG:NOG301234 HOGENOM:HOG000035116 HOVERGEN:HBG053490 OMA:MEVYDAE OrthoDB:EOG73NG39 TreeFam:TF331685 GeneTree:ENSGT00390000018004 EMBL:AABR06036822 EMBL:AABR06036823 EMBL:BC158699 RefSeq:NP_001101408.1 UniGene:Rn.11499 STRING:10116.ENSRNOP00000029128 Ensembl:ENSRNOT00000029704 GeneID:313245 KEGG:rno:313245 UCSC:RGD:1565773 NextBio:665902 PRO:PR:B0BN64 Genevestigator:B0BN64 Uniprot:B0BN64) HSP 1 Score: 53.5286 bits (127), Expect = 1.844e-6 Identity = 50/222 (22.52%), Postives = 103/222 (46.40%), Query Frame = 0 Query: 21 LIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTF 234 ++ +F++G L P N++ + N+ +K + L+ +TD++ Y ++KC + ++ I NKT+ ++ + + ++ P +FA +S E L R L + FG K +R KV ++ +A AAE++ + +L S+ ++ + + +PP + AT E+VY ++++S E +ALE+ + F Sbjct: 39 VLVQFSNGKLQNPGNMR---FTLYNSTDLVNPRQKCHRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAEVFNMQP-LFAEDSI-----EHGPPLENQNKTFRDKLDS-CIEAFGSTKQKRSLNSRRMNKVGSESLNFTVAKAAESIIDTKGVSALVSDAMQDDLQNDSLYLPPCHADATKPEDVYRFEDILSPAEYDALESPSEAF 250
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:POLR1E "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR009668 Pfam:PF06870 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0003899 GeneTree:ENSGT00390000018004 EMBL:CU137689 Ensembl:ENSSSCT00000005886 Uniprot:F1ST74) HSP 1 Score: 48.9062 bits (115), Expect = 4.904e-5 Identity = 60/303 (19.80%), Postives = 132/303 (43.56%), Query Frame = 0 Query: 60 LSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRD----KALCHAIVLALLSSDYRIEF 350 L+ +TD++ Y ++KC + ++ I NKT+ ++ + + ++ P+ + L S SK +++ + + FG K +R KV ++ +A AAE++ + +L S+ + S+ + +PP + A E+VY ++++S E +AL++ + F +E L + + S ++E+L N + I ++ + F K ++ +P+ + + K+ ++G L + D K + I+LAL +D++I+ Sbjct: 21 LAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAEMFNMQPLF----TVEKVLRTGDPEESASKFLEKAQM-DSCIEAFGTTKQKRALNSRRMNKVGSESLNRAVAKAAEDIIDSKGVTALVSDAIHSDLQDDSLYLPPCHADAAKPEDVYKFEDVLSPAEYDALQSPSEAF-RNVTSEQILKMIEENSHCSFVIEALKSLPSNQESRDRQARCIWFLDTLIKFRAQKVIKRKSALGPGIPHVISTKLLKHFTCLTYNNGSLRNVISDSMKAKITAYVIILALHINDFQIDL 317
BLAST of EMLSAG00000007203 vs. GO
Match: - (symbol:POLR1E "DNA-directed RNA polymerase I subunit RPA49" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005736 "DNA-directed RNA polymerase I complex" evidence=IBA] [GO:0006360 "transcription from RNA polymerase I promoter" evidence=IBA] [GO:0009303 "rRNA transcription" evidence=ISS] [GO:0001054 "RNA polymerase I activity" evidence=IBA] InterPro:IPR009668 Pfam:PF06870 GO:GO:0005737 GO:GO:0003677 GO:GO:0030054 GO:GO:0009303 GO:GO:0006360 GO:GO:0005736 GO:GO:0003899 KO:K03005 EMBL:AK023452 EMBL:AK024032 EMBL:AK091294 EMBL:CR457313 EMBL:AL158156 EMBL:BC001337 EMBL:BC014331 RefSeq:NP_001269695.1 RefSeq:NP_071935.1 RefSeq:XP_005251604.1 UniGene:Hs.591087 UniGene:Hs.733126 ProteinModelPortal:Q9GZS1 SMR:Q9GZS1 BioGrid:122173 DIP:DIP-27546N IntAct:Q9GZS1 MINT:MINT-1137773 STRING:9606.ENSP00000367029 PhosphoSite:Q9GZS1 DMDM:62901107 SWISS-2DPAGE:Q9GZS1 PaxDb:Q9GZS1 PRIDE:Q9GZS1 DNASU:64425 Ensembl:ENST00000377792 Ensembl:ENST00000377798 GeneID:64425 KEGG:hsa:64425 UCSC:uc003zzy.1 UCSC:uc003zzz.1 CTD:64425 GeneCards:GC09P037486 HGNC:HGNC:17631 HPA:HPA022527 neXtProt:NX_Q9GZS1 PharmGKB:PA142671136 eggNOG:NOG301234 HOGENOM:HOG000035116 HOVERGEN:HBG053490 InParanoid:Q9GZS1 OMA:MEVYDAE OrthoDB:EOG73NG39 PhylomeDB:Q9GZS1 TreeFam:TF331685 GeneWiki:POLR1E GenomeRNAi:64425 NextBio:66425 PRO:PR:Q9GZS1 ArrayExpress:Q9GZS1 Bgee:Q9GZS1 CleanEx:HS_POLR1E Genevestigator:Q9GZS1 Uniprot:Q9GZS1) HSP 1 Score: 48.521 bits (114), Expect = 8.436e-5 Identity = 50/223 (22.42%), Postives = 101/223 (45.29%), Query Frame = 0 Query: 21 LIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFD-LSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENV----NLDSLNSEIVESNFE----LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTF 234 L +F++G L P N++ + N+ S + RK N L+ +TD++ Y ++KC + ++ I NKT+ ++ + + ++ P +F+ S L + + MD + FG K +R +V ++ +A AAE + + +L S+ + ++ + +PP A E+VY ++++S E EAL++ + F Sbjct: 86 LTVQFSNGKLQSPGNMRFTLYE----NKDSTNPRKRNQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQP-LFSDVSVESELALESQTKTYREKMD------SCIEAFGTTKQKRALNTRRMNRVGNESLNRAVAKAAETIIDTKGVTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVYKFEDLLSPAEYEALQSPSEAF 297
BLAST of EMLSAG00000007203 vs. C. finmarchicus
Match: gi|592952042|gb|GAXK01006511.1| (TSA: Calanus finmarchicus comp68931_c0_seq1 transcribed RNA sequence) HSP 1 Score: 182.57 bits (462), Expect = 3.567e-51 Identity = 127/410 (30.98%), Postives = 218/410 (53.17%), Query Frame = 0 Query: 7 VESVSVQK--IGSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGP-VVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLG-IILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQF-VDDGK----LTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSK 407 ++ V++Q +G GP++ F H A +P + D T + + + + TD M YSS +S + T++A+R+K T K RL++ N L P +++ + L E+++A + + ++M K L+ FGQAKGQRF+ Q DRM+VD +K+ AA V+ D L + + +++P N A KE+VY L++M++ E++ L + + A+L K +S L L + N G+ L I LY++G + F+ L+ R G +SL +LP ++K +++ F +++G +TP D+A+CH IVLALL+++++++ L S+RV+ LK L++ GA D+V S +VLKLPLA+F+ N + KK+ K Sbjct: 58 IDDVTIQNKAVGKVGPILPSFQH-APCDPIALMETTKDCKVTADWP-GQTDPGLVVQVSTDHMTYSSSNTS----RTNMYYNTFVALRDKNTGKTRLLQANETVLSPKIIYPSTKNPLLLQENIEAKTFA---EKMEASKHLIKSFGQAKGQRFYDQQDRMRVDTSQVEEKVMKAAGAVSEDRLTAVPEAESVQIVPKRNDGAGRKEQVYLLEDMLTKVELKHLVEAGDNVLQDFKNLAELKEAQKNRNLSALGVELLNKCINMEGEVGNLAAITLYLEGIVKFSRLRQGEMRKGE-KSLQQFLPLNIKKKVFSYFSINNGTSNRIVTPELTDRAICHVIVLALLANNFKLDTSLLTESIRVRPDHLKKLVAMVGAHLSNDSVNQSQFIVLKLPLANFNVNYVGKKKNRK 1257
BLAST of EMLSAG00000007203 vs. C. finmarchicus
Match: gi|592939053|gb|GAXK01019500.1| (TSA: Calanus finmarchicus comp81682_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 4.095e+0 Identity = 21/76 (27.63%), Postives = 33/76 (43.42%), Query Frame = 0 Query: 200 PPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLG 275 PPI T+ E++ L + ++ EAI+K DA+ I L+ K++KN +GK T G Sbjct: 1433 PPIAEVGTINEQILRLMQSLGIDPARTKEAIIK------------DAYDHHAAIYFLLLDRLKEQKNNIGKGQTDG 1624
BLAST of EMLSAG00000007203 vs. C. finmarchicus
Match: gi|592885864|gb|GAXK01072511.1| (TSA: Calanus finmarchicus comp6516540_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 9.377e+0 Identity = 19/65 (29.23%), Postives = 32/65 (49.23%), Query Frame = 0 Query: 155 QRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEI--VESNFELIPPINRKATLKEEVYNLKN 217 Q +Q D M +DE A++ + S+ + +NF +I RK T ++E++NLKN Sbjct: 84 QELYQYFDGMMIDEARQYTLTKYASKKGKGGKIESDHNPMHANFNIIYEKGRKNTKRKEMFNLKN 278
BLAST of EMLSAG00000007203 vs. L. salmonis peptides
Match: EMLSAP00000007203 (pep:novel supercontig:LSalAtl2s:LSalAtl2s404:401893:407754:1 gene:EMLSAG00000007203 transcript:EMLSAT00000007203 description:"maker-LSalAtl2s404-augustus-gene-4.25") HSP 1 Score: 835.484 bits (2157), Expect = 0.000e+0 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0 Query: 1 MTKKATVESVSVQKIGSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKKFFV 411 MTKKATVESVSVQKIGSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKKFFV Sbjct: 1 MTKKATVESVSVQKIGSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKKFFV 411
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Match: EFX77832.1 (hypothetical protein DAPPUDRAFT_105793 [Daphnia pulex]) HSP 1 Score: 146.362 bits (368), Expect = 1.410e-39 Identity = 113/338 (33.43%), Postives = 182/338 (53.85%), Query Frame = 0 Query: 84 SRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIV-----ESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTF--NEKYP-TEAKLDAF--FKENKISKLVES--LYKQEKNGLGKASTLGIILYIQGAL-CFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKK 408 S+ YIA+RN+ T+KV+L+E + + L P+V +TN L +D S++ ++KQ V++FG KGQR + QA+R+ V + + AA + +SE+V +S ++PP N L +VY ++N++S N++ ALE I +E P T+ K F + + S+L++S L K+EK KA +LY + + C A K + R+ QSLP +PD VRK+I +FV+ L+ MSRDK +CHAI LAL ++ + SS+++ + L+ LI GA D G S++VLK+PL + KR+ ++ Sbjct: 12 SQMLYIALRNRVTSKVKLVEISKVSLSPIVQYPPTTNPVL---IDDGSSN-------MEKQFVHRFGMLKGQRMYDQAERLTVKAENVKANLENAAIGTAIQ--DSELVVPKSSDSYETMLPPRNTDTKLPSQVYQIENIVSENDMTALEGITLKLMADESDPDTQEKFKEFSVYFTKEFSRLMKSSHLNKEEKLRCLKA-----LLYTECLIKCSAIKKKSITRDLLDQSLPTSIPDSVRKSIKDKFVEGWTLSKMSRDKIICHAIALALAVGSCSVDAESFSSSLKLDMQSLENLIRVVGARTDKDKSNGVSKIVLKIPLTLPPQKRGQMKRKERR 332
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Match: gb|KYB26622.1| (hypothetical protein TcasGA2_TC033576 [Tribolium castaneum]) HSP 1 Score: 70.4774 bits (171), Expect = 4.143e-12 Identity = 71/315 (22.54%), Postives = 142/315 (45.08%), Query Frame = 0 Query: 66 KMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVE---SNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLG-KASTLGIILYIQGALCFADLKDNYFRNGPIQSLPN---YLPDFVRKNI-----YTQFVDDGKLTPMS-RDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKML 367 K++Y+ VS + K ++ I N+ T KVRL+ + + L P F S ++V++++ +L FG K +R +Q +RMK++ D +++ + +D IVE ++ PPI+R A +EEVY L ++ L + +LE + D+ +++ +V + Q +N ++LY+ + F + P +S+ P + N+ +T + G+ P+S RDK +C+ +V+A+++ DY ++ + L +++ V KL+ + Sbjct: 52 KLLYTGRVSGDQD---QDLHKRFLLISNRRTGKVRLVAVDSVILSPQ-FPEKSRGSISEKNVNSVN------------KLHKAFGSKKIKRITEQRERMKMNIDDVREQLEQTVAGIEIDDSGPLIVERAENDSAYRPPIHRDAESREEVYILNEIVPLKILNSLEKETREI---------FDSDLDSTELAPMVREKFAQMQNSSSPDVQKCELLLYLDYLI--------KFISKPARSITKKFVICPTSQQVNVHILDHFTVSSNTGRTRPVSMRDKTVCYILVIAMIAFDYEVDLEQLAKVIKIGVKKLQEM 333
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Match: gb|KFM70732.1| (DNA-directed RNA polymerase I subunit RPA49, partial [Stegodyphus mimosarum]) HSP 1 Score: 65.855 bits (159), Expect = 2.556e-11 Identity = 69/259 (26.64%), Postives = 118/259 (45.56%), Query Frame = 0 Query: 149 FGQAKGQRFFQQADRMKVDEDAYIDKMALAAE-NVNLDSLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQ-FVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRR 405 FG Q+ + + ID L + N NL + S + S +IPP N+ A EVYN+ ++I+ E +ALE+ + T K+ A +K + + V Y + G ++ Y+Q +CF LK Y +P ++P+ ++ + Q F+ + P +DK L +A+VLAL+ + Y + L SS ++ + ++ ++ G C V S + LKLPL KI K+R+ Sbjct: 18 FGSKSRQKMIKSRRNLGTAASNIIDSEFLKFDTNENL-GIKSADLGSQSNIIPPQNKNAASVSEVYNINDIITAEEYDALESYAEFLLG--ATHGKI-AVWKRDSVYCDVVIKYLESSCGSLTLHNAKLLCYLQYMMCF--LKLTYLDMRKKDPVP-HVPEPFKQKLKDQFFLMNRSFPPSMKDKLLAYAMVLALILNHYNLNGNLLASSCKISMKRIDLIAGALG--CHVHRKDDSKWIELKLPLREL---KIEKQRK 264
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Match: AAF55533.1 (uncharacterized protein Dmel_CG18600 [Drosophila melanogaster]) HSP 1 Score: 63.929 bits (154), Expect = 2.744e-10 Identity = 82/362 (22.65%), Postives = 148/362 (40.88%), Query Frame = 0 Query: 1 MTKKATVESVSVQKIGSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNF------------ELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVD-----DGKLTPMSRDKALCHAIVLALLSSD 345 M K +ESV K P I KF +G+L+ + + V K ++Y+ + +K + TYI IRNK TNKV+++ PV A +V+ + T M R K+L+ +FG K RF ++M V+ + + E VN LN + + ++P N++AT +EVY ++++I + +E LE K + + + ++ ++K+ E+ +++ L + +I+Y+ L+ + + + + + +R +F D G T S +KAL H IV+ALL S+ Sbjct: 1 MEDKIIIESVCDHKRDENIPTILKFQNGSLLGDADFSMVESTVDG-----------------KKHALVYAGDQVYTGEVKDSEEVDTYIFIRNKLTNKVKVV--------PVQEALMYNHVY-KKLERQKRTGPTMSREHANKKLLKEFGGRKASRFVDNREQMMVNVEVMRQDL---DETVNSSMLNEDEEDGTLGDVSINNEEYLASIVPEFNKEATKVDEVYAVESLIPSSLLERLEEEAKVVFSTPVQTLPIKSEYLKSCLAKIQENPVSSKRDFLH----IKLIIYMDALQSLISLRSRQMQKAELSGITEKIENDIRH----RFADPNVAKKGTRTNFSSEKALTHFIVMALLLSE 325
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Match: XP_623635.3 (PREDICTED: uncharacterized protein LOC551240 isoform X1 [Apis mellifera]) HSP 1 Score: 62.3882 bits (150), Expect = 9.811e-10 Identity = 87/384 (22.66%), Postives = 174/384 (45.31%), Query Frame = 0 Query: 29 ALIEPTNIKSINLDVSNTNQFSEDERKLN----FDLSLKTDKMIYSSEVSSVKSIKCTPSR---KTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNFELI-----PPINRKATLKEEVYNLKNMISLNEIEALEAIVK-TFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADL--KDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMS-RDKALCHAIVLALLSSDYRIEFKDLVS--SVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLAS 394 +IEP+ I+ I ++ N E+ +K++ +D + K + S++ + K ++ +T + NK T K RL++ + P+ L +S + +++A+ L +FG K +R +Q +R+K++ ++ +++ NV ++ + N E I P NRKAT ++YN+ +++ N++E L VK N T + FF I L K + + L K + +++YIQ + ++ KD R + + + ++ N Y+ + G+L P S +DK + H ++LAL+ ++ ++ + + S R+ + KL L GA + + LK+PL + Sbjct: 11 VIIEPSKIQPIIVNFQNGELKDEEAKKMSCGLFYDQNKKKTMLALSNQQIVYRGYKPDTTQDLMRTMLVFHNKKTGKARLVQVERWQVTPI----------LEKSAIKDNRQAEDEKIAI---LNKQFGSKKVKRRTEQFERLKINIESIKEQLEQTVSNVKINKMELSTQLPNNEYITNTTLPECNRKATNVNDIYNIYDIVPENKLENLYNNVKEILNNNSNTLEENSKFF----IRTL--QYLKSDSDNLKKTA---LLIYIQAIATWLNMPIKDAKKRGIKVCLVSEEINSYII-NTYSVQSNHGRLRPTSIKDKGVIHCMILALIICNFTLDLELFATIFSHRMGLKKLTDLARIIGA---LPNKEDKKIITLKIPLPA 368
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Match: XP_006572264.1 (PREDICTED: uncharacterized protein LOC551240 isoform X2 [Apis mellifera]) HSP 1 Score: 58.5362 bits (140), Expect = 1.522e-8 Identity = 75/320 (23.44%), Postives = 145/320 (45.31%), Query Frame = 0 Query: 86 KTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNFELI-----PPINRKATLKEEVYNLKNMISLNEIEALEAIVK-TFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADL--KDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMS-RDKALCHAIVLALLSSDYRIEFKDLVS--SVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLAS 394 +T + NK T K RL++ + P+ L +S + +++A+ L +FG K +R +Q +R+K++ ++ +++ NV ++ + N E I P NRKAT ++YN+ +++ N++E L VK N T + FF I L K + + L K + +++YIQ + ++ KD R + + + ++ N Y+ + G+L P S +DK + H ++LAL+ ++ ++ + + S R+ + KL L GA + + LK+PL + Sbjct: 38 RTMLVFHNKKTGKARLVQVERWQVTPI----------LEKSAIKDNRQAEDEKIAI---LNKQFGSKKVKRRTEQFERLKINIESIKEQLEQTVSNVKINKMELSTQLPNNEYITNTTLPECNRKATNVNDIYNIYDIVPENKLENLYNNVKEILNNNSNTLEENSKFF----IRTL--QYLKSDSDNLKKTA---LLIYIQAIATWLNMPIKDAKKRGIKVCLVSEEINSYI-INTYSVQSNHGRLRPTSIKDKGVIHCMILALIICNFTLDLELFATIFSHRMGLKKLTDLARIIGA---LPNKEDKKIITLKIPLPA 331
BLAST of EMLSAG00000007203 vs. nr
Match: gi|321466839|gb|EFX77832.1| (hypothetical protein DAPPUDRAFT_105793 [Daphnia pulex]) HSP 1 Score: 146.362 bits (368), Expect = 6.897e-37 Identity = 113/338 (33.43%), Postives = 182/338 (53.85%), Query Frame = 0 Query: 84 SRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIV-----ESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTF--NEKYP-TEAKLDAF--FKENKISKLVES--LYKQEKNGLGKASTLGIILYIQGAL-CFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKK 408 S+ YIA+RN+ T+KV+L+E + + L P+V +TN L +D S++ ++KQ V++FG KGQR + QA+R+ V + + AA + +SE+V +S ++PP N L +VY ++N++S N++ ALE I +E P T+ K F + + S+L++S L K+EK KA +LY + + C A K + R+ QSLP +PD VRK+I +FV+ L+ MSRDK +CHAI LAL ++ + SS+++ + L+ LI GA D G S++VLK+PL + KR+ ++ Sbjct: 12 SQMLYIALRNRVTSKVKLVEISKVSLSPIVQYPPTTNPVL---IDDGSSN-------MEKQFVHRFGMLKGQRMYDQAERLTVKAENVKANLENAAIGTAIQ--DSELVVPKSSDSYETMLPPRNTDTKLPSQVYQIENIVSENDMTALEGITLKLMADESDPDTQEKFKEFSVYFTKEFSRLMKSSHLNKEEKLRCLKA-----LLYTECLIKCSAIKKKSITRDLLDQSLPTSIPDSVRKSIKDKFVEGWTLSKMSRDKIICHAIALALAVGSCSVDAESFSSSLKLDMQSLENLIRVVGARTDKDKSNGVSKIVLKIPLTLPPQKRGQMKRKERR 332
BLAST of EMLSAG00000007203 vs. nr
Match: gi|1022758922|gb|KZS05348.1| (putative DNA-directed RNA polymerase I subunit RPA49 [Daphnia magna]) HSP 1 Score: 137.117 bits (344), Expect = 9.676e-33 Identity = 102/323 (31.58%), Postives = 169/323 (52.32%), Query Frame = 0 Query: 88 YIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIV----ESNFE-LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVK---TFNEKYPTE----AKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPI-QSLPNYLPDFVRKNIYTQFVDDGK----LTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLA 393 YIA+RNK TNKV+L+E + L PV+ STN L E + + K + MA + V++FG KGQR + QA+R+ V + + AA N +SE+V ++E ++PP N AT EVY L+N+I +++ ALE + K T P + +F ++++++ S +E K L ++YI+G + F+ +K G + +SLP +PD V+++I QF + LT M RD+ +CH I LAL + I+ + +SS+++ + ++ LI GA + D + +++VL PLA Sbjct: 80 YIALRNKVTNKVKLVEVAKVMLSPVIQYPPSTNPMLMEKEEG-NDRKSKEEMA--RAFVHRFGMLKGQRMYDQAERLTVKAETVRANLENAAFNTAFQ--DSELVVPKSSDSYEIMLPPRNANATTALEVYQLENIIPSSDMIALEDVAKLLLTSETDSPMHNDNLTQFSVYFT-DELTRVRRSNQDEE----AKLRLLKALIYIEGLIKFSAIKRKTLSRGVVDESLPAGIPDSVKRSIKEQFSSRAESHWTLTKMDRDRTICHVIALALAIGNCSIDAEYFISSLKLDMDSVQTLIRVVGARLVKDKLLSVTKIVLAFPLA 392
BLAST of EMLSAG00000007203 vs. nr
Match: gi|942324055|gb|JAN43960.1| (DNA-directed RNA polymerase I subunit RPA49 [Daphnia magna]) HSP 1 Score: 119.013 bits (297), Expect = 1.748e-26 Identity = 92/290 (31.72%), Postives = 149/290 (51.38%), Query Frame = 0 Query: 88 YIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMA---LKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIV----ESNFE-LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVK---TFNEKYPTE----AKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPI-QSLPNYLPDFVRKNIYTQFVDDGK----LTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSV 357 YIA+RNK TNKV+L+E + L PV+ STN L E +G DR + + + V++FG KGQR + QA+R+ V + + AA N +SE+V ++E ++PP N AT EVY L+N+I +++ ALE + K T P + +F ++++++ S +E K L ++YI+G + F+ +K G + +SLP +PD V+++I QF + LT M RD+ +CH I LAL + I+ + +SS+ Sbjct: 80 YIALRNKVTNKVKLVEVAKVMLSPVIQYPPSTNPMLMEK------EEGNDRKSKEEMARAFVHRFGMLKGQRMYDQAERLTVKAETVRANLENAAFNTAFQ--DSELVVPKSSDSYEIMLPPRNANATTALEVYQLENIIPSSDMIALEDVAKLLLTSETDSPMHNDNLTQFSVYFT-DELTRVRRSNQDEE----AKLRLLKALIYIEGLIKFSAIKRKTLSRGVVDESLPAGIPDSVKRSIKEQFSSRAESHWTLTKMDRDRTICHVIALALAIGNCSIDAEYFISSL 356
BLAST of EMLSAG00000007203 vs. nr
Match: gi|942416157|gb|JAN90008.1| (DNA-directed RNA polymerase I subunit RPA49 [Daphnia magna]) HSP 1 Score: 116.701 bits (291), Expect = 5.141e-25 Identity = 91/288 (31.60%), Postives = 147/288 (51.04%), Query Frame = 0 Query: 88 YIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMA---LKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIV----ESNFE-LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVK---TFNEKYPTE----AKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPI-QSLPNYLPDFVRKNIYTQFVDDGK----LTPMSRDKALCHAIVLALLSSDYRIEFKDLVS 355 YIA+RNK TNKV+L+E + L PV+ STN L E +G DR + + + V++FG KGQR + QA+R+ V + + AA N +SE+V ++E ++PP N AT EVY L+N+I +++ ALE + K T P + +F ++++++ S +E K L ++YI+G + F+ +K G + +SLP +PD V+++I QF + LT M RD+ +CH I LAL + I+ + +S Sbjct: 80 YIALRNKVTNKVKLVEVAKVMLSPVIQYPPSTNPMLMEK------EEGNDRKSKEEMARAFVHRFGMLKGQRMYDQAERLTVKAETVRANLENAAFNTAFQ--DSELVVPKSSDSYEIMLPPRNANATTALEVYQLENIIPSSDMIALEDVAKLLLTSETDSPMHNDNLTQFSVYFT-DELTRVRRSNQDEE----AKLRLLKALIYIEGLIKFSAIKRKTLSRGVVDESLPAGIPDSVKRSIKEQFSSRAESHWTLTKMDRDRTICHVIALALAIGNCSIDAEYFIS 354
BLAST of EMLSAG00000007203 vs. nr
Match: gi|646721744|gb|KDR22974.1| (DNA-directed RNA polymerase I subunit RPA49 [Zootermopsis nevadensis]) HSP 1 Score: 102.834 bits (255), Expect = 1.088e-20 Identity = 102/332 (30.72%), Postives = 162/332 (48.80%), Query Frame = 0 Query: 89 IAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSE-IVESNFE-LIPPINRKATLKEEVYNLKNMISLNEIEAL-EAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPN-------YLPDFVRK--NIYTQFVDDGKLTP-MSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSK 407 IAIRN+ TNKVRL+ T L PV R N S+ ++ T + DR+ +K FG + QR + RM+ + D DK+ ++V+++ + + +V ++ E +PPINR A ++VY+L +++S E+ +L E ++T E P + +FF + N L S+ +I + AL +ADL + N ++SL Y D K N +T G+L P + +DKALCH +VL L+ S +++ + L S+ + V +L L GA V + + SS V LKLPL + V KR K Sbjct: 75 IAIRNRQTNKVRLVPTTSFLLSPV--PRVEEN-----SIVSVVTQEDRDRLQMK------FGSKRQQRSLESYTRMRTNADYLKDKLKDVIDSVSVEEASQQPVVNASHEAYLPPINRIAATVDDVYSLHDIVSAEELASLKEEAIRTMKE--PKKDMFSSFFSQTL------------PNVLQLGSSQPVIESV-CALLYADLLIKFL-NTSLKSLQKQKNIVCPYSEDVNSKIINTFTVQSPHGRLRPNLLKDKALCHLLVLGLILSHFKLNLELLSKSLSISVKRLNHLSQQVGA---VSSSSSSSIVTLKLPLPPLKQLQTVVKRNKK 374
BLAST of EMLSAG00000007203 vs. nr
Match: gi|942313169|gb|JAN38517.1| (DNA-directed RNA polymerase I subunit RPA49 [Daphnia magna]) HSP 1 Score: 95.5153 bits (236), Expect = 2.198e-18 Identity = 77/244 (31.56%), Postives = 126/244 (51.64%), Query Frame = 0 Query: 88 YIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIV----ESNFE-LIPPINRKATLKEEVYNLKNMISLNEIEALEAIVK---TFNEKYPTE----AKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPI-QSLPNYLPDFVRKNIYTQF 318 YIA+RNK TNKV+L+E + L PV+ STN L E + + K + MA + V++FG KGQR + QA+R+ V + + AA N +SE+V ++E ++PP N AT EVY L+N+I +++ ALE + K T P + +F ++++++ S +E K L ++YI+G + F+ +K G + +SLP +PD V+++I F Sbjct: 80 YIALRNKVTNKVKLVEVAKVMLSPVIQYPPSTNPMLMEKEEG-NDRKSKEEMA--RAFVHRFGMLKGQRMYDQAERLTVKAETVRANLENAAFNTAFQ--DSELVVPKSSDSYEIMLPPRNANATTALEVYQLENIIPSSDMIALEDVAKLLLTSETDSPMHNDNLTQFSVYFT-DELTRVRRSNQDEE----AKLRLLKALIYIEGLIKFSAIKRKTLSRGVVDESLPAGIPDSVKRSIKNSF 313
BLAST of EMLSAG00000007203 vs. nr
Match: gi|665800307|ref|XP_008548111.1| (PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Microplitis demolitor]) HSP 1 Score: 93.9745 bits (232), Expect = 1.073e-17 Identity = 86/313 (27.48%), Postives = 144/313 (46.01%), Query Frame = 0 Query: 87 TYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLD--SLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADL--KDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMS-RDKALCHAIVLALLSSDYRIEFKDLVS--SVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPL 392 T +AI NKTT K+RLI+ + P + + +E+++ D+ L L +FG K +R Q +MK+ DA D++ +V +D L E +E +PP NRKA EEVYNL ++I +E L I + +++ ++ N+ S+ + K K + I+ +I G + + ++ R+ I +P F + Y+ G++ PMS RDKA+ H+I+LAL+ +DY+++ + R+ + KL L GA V V LK+PL Sbjct: 73 TMLAIHNKTTGKIRLIQAERWVVSPTI----KNQLVYDENIED-------DQNNL---LNTQFGTKKVKRRTMQYGKMKISVDAVKDQLTETVAHVEIDKNDLKVEPIEDKLTSLPPCNRKAASAEEVYNLNDIIP---VEILTLICEKYDDILQSDG--------NRKSRFYVDILKSLDRDTQKKKKMAILEFINGISKWLSMSVREAKRRSSEICVIPEV--SFYIIDTYSMISASGRIRPMSMRDKAIIHSIILALMVNDYKLDLDSFNEHMTCRLSIKKLTELTRVIGA---VPNKDNKQRVSLKVPL 355
BLAST of EMLSAG00000007203 vs. nr
Match: gi|512889013|ref|XP_004922182.1| (PREDICTED: uncharacterized protein LOC101743619 [Bombyx mori]) HSP 1 Score: 91.6633 bits (226), Expect = 6.441e-17 Identity = 102/336 (30.36%), Postives = 162/336 (48.21%), Query Frame = 0 Query: 86 KTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSL---NSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTE--AKLDAFFK----ENKISK-LVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKL-TPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVV-LKLPLASFDANKIVKKRRSKKF 409 KT I RNK T KVR+IE + L P + VD L S+ M+ L L KFG K ++ +Q +++KV+ D+M ++N++ D L N + NF +PPI+R+A E+VY+L +++ + E K + E T+ + + F K EN K LV +LY A++L L + G L D+ + P + L D + KN + ++ KL TP +DK+LCHA+V LL + Y+ +DL ++ + +S TGA+ + + G+ +VV LKLP++ K +RRS KF Sbjct: 71 KTIIMARNKKTGKVRIIEVGTVDLKPYL------------KVD-LDNSQLMETSNL--DLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENF-YVPPIDREAKSVEQVYDLDKILTEDMFE------KVYEEMENTDYMSNFNEFLKTIVSENMPKKHLVLALY---------ANSL---LNMYGTL-MKDITKKTYVACPHSA---SLNDHILKN-FLSISNNRKLRTPQMKDKSLCHALVFVLLINKYKFNLEDLCKQLKFTSRVVATKVSVTGASIITE---GNKKVVQLKLPIS-----KPALRRRSNKF 359
BLAST of EMLSAG00000007203 vs. nr
Match: gi|817066814|ref|XP_012255265.1| (PREDICTED: uncharacterized protein LOC105685590 [Athalia rosae]) HSP 1 Score: 88.9669 bits (219), Expect = 7.058e-16 Identity = 111/421 (26.37%), Postives = 200/421 (47.51%), Query Frame = 0 Query: 4 KATVESVSVQKIGSFGPLIAKFNHGALI--EPTNIKSINLDVSNTNQFSEDERKLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLD-------SLNSEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEAL-EAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADL--KDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMS-RDKALCHAIVLALLSSDYRIEFKDLVSSV---RVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKK 408 +AT++ VS+ K P+I F +G L E TN+K +E+ L+L +++Y + T +AI NK T KVRL++ + V+ +N+ L+E +R+A+ L +FG K +R +Q +RMK+D + +++ +VN++ SL + V +N + P NR A+ E+VY++ +++ L ++E L E +EK ++K FF E +SKL K+ + + + I+LY++ + + + KD + I L + + V ++ Y+ G+ P + RDK + H I+L L+ S+Y+++ +L++++ RV + KL L GA V + + VVLKLPL ++V R+ KK Sbjct: 6 EATIDKVSL-KPNKIQPIIVHFQNGKLKDEEVTNMKC---------GLYREEKSNKQLLALSNGQIVYKGHRPDPDEAQTY----TMLAIHNKRTGKVRLVQAERWQVAAVLDKEVESNIDLDE-----------NRIAM---LHKQFGSKKVKRRTEQIERMKIDVETVKEQLEKTVSSVNIERSELSLPSLQDDSV-TNMNM-PNCNRSASRVEDVYDINDIVPLEKLETLHEGCNFILHEKVEGKSK---FF-EITLSKL--------KSKVCDLNEIAILLYMEAVVTWLSMPIKDAKKKGSDICPLSTDISNHVIQS-YSVPSAHGRQRPNTMRDKGMIHCIILGLMISNYKLDL-NLLTTIFKNRVGIKKLGELARFVGA---VSSKDDKNSVVLKLPLPP----QLVVARKGKK 375
BLAST of EMLSAG00000007203 vs. nr
Match: gi|914560077|gb|KOB67441.1| (DNA-directed RNA polymerase I subunit RPA49 [Operophtera brumata]) HSP 1 Score: 87.0409 bits (214), Expect = 2.856e-15 Identity = 90/331 (27.19%), Postives = 159/331 (48.04%), Query Frame = 0 Query: 86 KTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLN----SEIVESNFELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLV--ESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMS-RDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSEVVLKLPLASFDANKIVKKRRSKKF 409 +T I RN+ T KVRLIE I + P E + L +S+ +D AL +L KFG K +++ +Q++++K +E A + +M ++N+ D L+ S+ NF IPPINR+AT EVY++ +++ + EA+ + +D K N + K + + L +++K AS+L + +++ +K + Q+ L D + ++ +T +V+ + P+ RDK L H +VL LL ++++ F + + V + ++ TGA V V LK+PL NK +R+S KF Sbjct: 69 RTLILARNRKTGKVRLIEVGNIEVKP-------------EIKNDLESSELLDNSAL--ELGRKFGSKKYKKYLEQSEKLKQNEQAVVAQMVNVSQNLTQDQLDVSYDSQAETDNF-YIPPINREATAVTEVYDIDVILTPEQYEAISNDIDG----------IDLMEKLNPVIKGLPRKDLTQKQKVLALYASSLYNLYFVKSTEI---MKKGFIACYESQT----LHDHILQHFFT-YVNGKRCRPIQYRDKTLIHTMVLMLLINNFKFNFDEFCKLTKAAVRTMTSKLAMTGA--YVVNVNSVRMAQLKIPL-----NKPPTRRKSSKF 358
BLAST of EMLSAG00000007203 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold18_size714446-snap-gene-1.16 (protein:Tk08452 transcript:maker-scaffold18_size714446-snap-gene-1.16-mRNA-1 annotation:"protein rft1 homolog") HSP 1 Score: 209.534 bits (532), Expect = 4.274e-60 Identity = 130/376 (34.57%), Postives = 213/376 (56.65%), Query Frame = 0 Query: 16 GSFGPLIAKFNHGALIEPTNIKSINLDVSNTNQFSEDER----KLNFDLSLKTDKMIYSSEVSSVKSIKCTPSRKTYIAIRNKTTNKVRLIETNPIHLGPVVFARNSTNVFLNESVDALSTSKGMDRMALKKQLVNKFGQAKGQRFFQQADRMKVDEDAYIDKMALAAENVNLDSLNSEIVESNF--ELIPPINRKATLKEEVYNLKNMISLNEIEALEAIVKTFNEKYPTEAKLDAFFKENKISKLVESLYKQEKNGLGKASTLGIILYIQGALCFADLKDNYFRNGPIQSLPNYLPDFVRKNIYTQFVDDGKLTPMSRDKALCHAIVLALLSSDYRIEFKDLVSSVRVQVPKLKMLISCTGATCLVDTVTGSSE 385 G GP++ +F HG L + T++ +S T F +D + + +L ++ +M YS+ +SV++I+ P T++AI+NK TN++RL+ETN I LG +V A +TN L +D T R+ K+ LV +FGQ+KGQ+ ++QADRM + +D K+ A V+ +L + ESN +L+PP +RKA +VYNL ++S E E+L + + + T +++A K+ IS L+ L ++ N LG+ LY++G + + GP + LP YLP+ +++ I+ +FV+D +LTP+ RDK +C+ IVL+LL +D ++ F L S++ K+K LIS GAT L G+ E Sbjct: 15 GKIGPILVQFEHGKLSDETSLDQFETQLSYT--FKDDGKVRKCRPEINLGVQNQRMKYSNRANSVRNIRPNPYMSTFLAIKNKKTNQIRLVETNTITLGAMVKAPTTTNTQLLAKLDEEPTLA--SRLKKKQHLVQEFGQSKGQKSYEQADRMTIKDDVITTKLTQTAAEVDQSALVFDPEESNLASQLLPPCDRKAASAIDVYNLDIILSPAERESLAESAELYLAGFATVEEMEASVKKKDISILLCQLVSKQWNK-PDYEYLGVALYVEGLIKLQAATLKTLKLGP-KGLPQYLPEGLKRKIFKEFVEDNRLTPLGRDKTICYIIVLSLLINDLKLSFPWLNQSLKKAPDKIKHLISFVGATLLKSEDMGNPE 384 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007203 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 8
BLAST of EMLSAG00000007203 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000007203 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000007203 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007203 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 6
BLAST of EMLSAG00000007203 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000007203 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s404:401893..407754+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007203-689969 ID=EMLSAG00000007203-689969|Name=EMLSAG00000007203|organism=Lepeophtheirus salmonis|type=gene|length=5862bp|location=Sequence derived from alignment at LSalAtl2s404:401893..407754+ (Lepeophtheirus salmonis)back to top Add to Basket
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