EMLSAG00000007312, EMLSAG00000007312-690078 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000007312
Unique NameEMLSAG00000007312-690078
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592783050|gb|GAXK01171518.1| (TSA: Calanus finmarchicus comp63896_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 6.710e-13
Identity = 56/203 (27.59%), Postives = 98/203 (48.28%), Query Frame = 0
Query:   97 CELKISNPNYLDSGEWECYVSGGAESNFIRGT----TEIFVSRRAELYISEPDMETNSNQYIVLDM-XSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIA-SGIMILVVSCFVA 293
            C L I +P+  D+G W+C+V+   ++N   GT     ++FV+  + + I++PDM  N+   I +D+  SSR  + A+C A + IP P   WY++E  P + + G   Q         S  +    SLD   ++    Y +         F F L C  DQ +Y+ +  +D        V G S  +I++ S +++ +VS  ++
Sbjct:  506 CGLTIQSPHANDTGIWKCHVN---DNNPDVGTQWREVDLFVANESVVAITDPDMYGNTGVSIEVDLSTSSRVDVDAECTAEYGIPPPDIIWYIDE--PTNTVDGSSDQTEQSDGTVVSSIRL---SLD---QNSLSRYGVRQ---TNNYFSFALGCYPDQGDYFDSNRDDIKNPAEVLVFGTSGAQILSTSAVIVTLVSLILS 1072          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592767987|gb|GAXK01186581.1| (TSA: Calanus finmarchicus comp45940_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 9.261e-6
Identity = 61/244 (25.00%), Postives = 100/244 (40.98%), Query Frame = 0
Query:   64 CSIIQG-TASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVS--GGAESNFIRGTTEIFVSRRAELYISEP--DMETNSNQYIVL----------DMXSSRPKLYAKCRAYHAIPYPQFRWYV-----NEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGP---KDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIM 284
            C+I  G T S  C P++       RI + +  +SC ++ISNP   D+G+W   V    G +        EI+   + E+ + E   + E  SN  I            D  S   ++   C A +  P P+  W +     NE++  +    +D   +   P    +   +E S D        L   + I+ +  +  EF  DL C+++Q        E N +RV+TRV   + RR+  S  M
Sbjct: 1237 CNIAGGDTQSKNC-PDDT------RITMTSSLTSCGIRISNPTPEDTGKWTLIVGEVKGTQVQSSSKIIEIYTYNQTEVILQEKRSEDEIPSNYEIWYNYDERRDQWRDGTSGYERVELACNAMYGRPVPEILWTINRDDRNELHSENTFTIRDGSGTTHDPSGYVKDWVSELSFDVNENFMNYLADTHGIDTNP-ESGEFTIDLDCVVEQG----TNGEYNSERVSTRV---TVRRVYNSNAM 1923          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592914828|gb|GAXK01043547.1| (TSA: Calanus finmarchicus comp50483_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 2.956e-4
Identity = 32/118 (27.12%), Postives = 52/118 (44.07%), Query Frame = 0
Query:    4 FIAVLLPFHILLN-PLPI--HAVNIQST--GDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEA--KSSSCELKISNPNYLDSGEWEC 114
             +++ + FH+ ++ P  I  H+ + QS   G    L C+   +W+ C WKHT    N + + +  C +    A      +  D     RI I     S  C L I++    D+G WEC
Sbjct:  100 IVSLFILFHLHISLPFEILSHSQSAQSMEPGQTMHLVCKSDNSWEFCLWKHT----NMEKEVVRDCLMEWKRAKGGVSVQKCDDSLTDRISISGDYDSHECGLTITSLQLEDAGNWEC 441          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592932865|gb|GAXK01025688.1| (TSA: Calanus finmarchicus comp2148746_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 9.788e-4
Identity = 46/200 (23.00%), Postives = 80/200 (40.00%), Query Frame = 0
Query:   29 GDEAVLRCEISGTWDTCRWKH-TFVKENTDTQSLFYCSIIQ-GTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLC 226
            G  A + C     W  C W+H + VKE         CSI + GT  N C    +  D+   ++I      C LK+ N +  D G + C ++     +  R   ++ V+ +A+L   +   +  S    +L++      +  +C    A P  QF+W V+        +  + +      R+ S  +YT   +D G    C
Sbjct:  464 GGVANISCTTDHEWFFCLWQHPSGVKE---------CSIQENGTYQNAC----IGMDH---MEIYGSEKFCSLKVENVSVRDHGTFMCLLNQADVFHTDRQFVKLEVATQAQLQFKKDKSDITS----ILELVEGEI-VDLECEGRRAYPASQFKWEVSGTELVLSTEDHEPEYGSHTFRSTSTIKYTADVVDDGSTIKC 1000          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592750188|gb|GAXK01204225.1| (TSA: Calanus finmarchicus comp410769_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 1.249e-3
Identity = 42/179 (23.46%), Postives = 66/179 (36.87%), Query Frame = 0
Query:    7 VLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVN 185
            VL    +L +    H V+  S+  E  L C  +  W  C W      E  D           G   N+   E      + R+++   SS C L I NP   D GEW C VS  +    ++   ++ +    E+ +  PD         +++M     K+   C      P P+  W V+
Sbjct:  582 VLAVVFLLFDQSAAH-VHFMSSTKEVSLSCTSTSPWFFCVW------EGPDGDRACALREKMGEQGNSLCGE------QGRLEVRGNSSICTLVIHNPQLSDHGEWTCAVSDDSSLETVKDYIQLDMVVEGEMVLL-PD-------TTMIEMVEGE-KVELVCMVEDVYPTPEISWSVS 1052          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592932864|gb|GAXK01025689.1| (TSA: Calanus finmarchicus comp2148746_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 1.474e-3
Identity = 46/200 (23.00%), Postives = 80/200 (40.00%), Query Frame = 0
Query:   29 GDEAVLRCEISGTWDTCRWKH-TFVKENTDTQSLFYCSIIQ-GTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLC 226
            G  A + C     W  C W+H + VKE         CSI + GT  N C    +  D+   ++I      C LK+ N +  D G + C ++     +  R   ++ V+ +A+L + +      S    +L++      +  +C    A P  QF+W V+        +  + +      R+ S  +YT   +D G    C
Sbjct:  354 GGVANISCTTDHEWFFCLWQHPSGVKE---------CSIQENGTYQNAC----IGMDH---MEIYGSEKFCSLKVENVSVRDHGTFMCLLNQADVFHTDRQFVKLEVASKAQLALRKGKSGIKS----ILELVEGEI-VDLECEGRRAYPASQFKWEVSGTELVLSTEDHEPEYGSHTFRSTSTIKYTADVVDDGSTIKC 890          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592750189|gb|GAXK01204224.1| (TSA: Calanus finmarchicus comp410769_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 1.676e-3
Identity = 42/179 (23.46%), Postives = 66/179 (36.87%), Query Frame = 0
Query:    7 VLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVN 185
            VL    +L +    H V+  S+  E  L C  +  W  C W      E  D           G   N+   E      + R+++   SS C L I NP   D GEW C VS  +    ++   ++ +    E+ +  PD         +++M     K+   C      P P+  W V+
Sbjct:  600 VLAVVFLLFDQSAAH-VHFMSSTKEVSLSCTSTSPWFFCVW------EGPDGDRACALREKMGEQGNSLCGE------QGRLEVRGNSSICTLVIHNPQLSDHGEWTCAVSDDSSLETVKDYIQLDMVVEGEMVLL-PD-------TTMIEMVEGE-KVELVCMVEDVYPTPEISWSVS 1070          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592804928|gb|GAXK01149640.1| (TSA: Calanus finmarchicus comp1082103_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 6.218e-3
Identity = 38/168 (22.62%), Postives = 58/168 (34.52%), Query Frame = 0
Query:   29 GDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQG--TASNTC--DPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSE 192
            G      C+    W  C W      +         C+I +    AS  C  DP         RI ++  S +C + ++N    D G W C V  G E    R   ++ V+R   + +   +  +N      +   +        CR+  A P P F W      P SE
Sbjct: 1345 GGTVSFLCQTDQRWFLCLWNSPLGNK--------VCAIQESDEGASQVCQGDP---------RILVQGDSINCGITVTNVTRDDWGAWMCLVQDGEEFKTDRREIDMEVARMGTVGLEFDEWTSNRTYSQRVLRITEGTATNISCRSLDAYPRPSFSWSGTPDGPVSE 1797          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592914827|gb|GAXK01043548.1| (TSA: Calanus finmarchicus comp50483_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 8.205e-3
Identity = 25/88 (28.41%), Postives = 34/88 (38.64%), Query Frame = 0
Query:   29 GDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEA--KSSSCELKISNPNYLDSGEWEC 114
            G    L C     W+ C WKHT    N + + +  C +    A      +  D     RI I     S  C L I++    D+G WEC
Sbjct:  123 GQTLSLTCRADSAWEFCLWKHT----NMEKEVVRDCLMEWKRAKGGVSVQKCDDSLTDRISISGDYDSHECGLTITSLQLEDAGNWEC 374          
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592837220|gb|GAXK01120324.1| (TSA: Calanus finmarchicus comp986163_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.1206 bits (87), Expect = 2.863e-2
Identity = 28/101 (27.72%), Postives = 35/101 (34.65%), Query Frame = 0
Query:   87 RIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRG--TTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVN 185
            R+KI+  SSSC L I  P   D G W C VS       I+     +I V     L  S   +E        L            C+     P P   W V+
Sbjct:  547 RMKIKGNSSSCSLVIDTPTLSDHGVWTCAVSDDRSLETIKDYRNLDIVVEGEVSLNPSHAILELGEGDMADL-----------LCKVEKGFPKPDISWGVD 816          
BLAST of EMLSAG00000007312 vs. L. salmonis peptides
Match: EMLSAP00000007312 (pep:novel supercontig:LSalAtl2s:LSalAtl2s410:645031:652161:1 gene:EMLSAG00000007312 transcript:EMLSAT00000007312 description:"snap_masked-LSalAtl2s410-processed-gene-6.19")

HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query:    1 MWGFIAVLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF 295
            MWGFIAVLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF
Sbjct:    1 MWGFIAVLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF 295          
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1185_size56580-snap-gene-0.13 (protein:Tk10351 transcript:maker-scaffold1185_size56580-snap-gene-0.13-mRNA-1 annotation:"amidohydrolase")

HSP 1 Score: 70.4774 bits (171), Expect = 1.041e-14
Identity = 44/162 (27.16%), Postives = 79/162 (48.77%), Query Frame = 0
Query:   34 LRCEIS----GTWDTCRWKHTFVKENTDTQSLFYCSIIQGT--ASNTCDPENVDT---DYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVS-----GGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFR 181
            L+C+I       W  C W HT ++  TD+  +   ++   +   +N C  +   +    Y  RI +    +SC + +      D G+WEC+V+     GG  S+++    +I V+ +  ++I+EP +E +S+  I  D+  +R ++ A CR Y   P P FR
Sbjct:   46 LKCDIQLQSEEAWLLCMWTHT-IEGRTDSNGMDLKAVCSTSPDGNNQCTNKGGSSQLDSYASRITMMTSPNSCGINVRGAVGEDDGQWECHVTDASTGGGQVSSYL----DIHVANQTTIFITEPRIEQDSSLTIEYDLEETRSEIEATCRGYGGKPKPTFR 202          
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1185_size56580-snap-gene-0.16 (protein:Tk10355 transcript:maker-scaffold1185_size56580-snap-gene-0.16-mRNA-1 annotation:"multidrug abc transporter atp-binding protein")

HSP 1 Score: 50.447 bits (119), Expect = 1.445e-7
Identity = 32/120 (26.67%), Postives = 60/120 (50.00%), Query Frame = 0
Query:  183 YVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGP--KDLCQNYNIEADLC-----KKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF 295
            Y+N  + R+EI        +R  + +  G+Y E  + + P  +D C  Y+I+   C     K   F F+L+C ++Q  Y+  ENED    V   V+  SS ++ +   ++++++ F+A  
Sbjct:  126 YIN--DDRNEIPETAMTKRIRSSKDNLLGEYDEERISFQPTLEDFCTRYDIDEYACETSKTKYHYFNFNLICKVEQEGYFQRENEDQEAVVQVDVVSGSSIQVAS---LVMILTSFLAML 240          
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold368_size193847-snap-gene-0.34 (protein:Tk09999 transcript:maker-scaffold368_size193847-snap-gene-0.34-mRNA-1 annotation:"PREDICTED: fasciclin-3-like")

HSP 1 Score: 48.9062 bits (115), Expect = 9.769e-7
Identity = 59/267 (22.10%), Postives = 104/267 (38.95%), Query Frame = 0
Query:   19 PIHAVNIQSTGDEAV-LRCEISGTWDTCRWKHT---FVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTT---EIFVSRRAEL-YISEPDMETNSNQYIVLDMXSSRPKLYAK-----------CRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQY-------TEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAEN 259
            P + VN+     E V L C      ++C W H     V  ++  Q    CS   G    +C   +       R++   + + C ++IS    +D+G W+    G   S  ++  +   E+F   ++ +  + E + +  S+ Y V    + R   + +           C+AY   P P F+WY+   +    +     QI+      D + QY        E  +D    D+ +  +IE +  + E   F L C I+QA     EN
Sbjct:   62 PDNNVNLAVPERETVTLECSFDAEVESCVWVHDEPLNVGTHSAGQYDIKCSAGPGENGQSCKALS-------RVQYIFQGNRCGIRISTTEPVDTGRWKLSAIGLTSSGGVQTASRDFELFTFNQSTIGMVDEDENDILSDTYEVHYNFNERENDWEEGKNNWEVVTFYCQAYGGRPEPTFKWYIENNDNDDLVNEPHFQINTNLMSVDDKDQYIRNLESKIEFQIDTELMDILERSSIEVN-SQDERVSFRLTCEIEQASNSFVEN 320          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000007312 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007312 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592783050|gb|GAXK01171518.1|6.710e-1327.59TSA: Calanus finmarchicus comp63896_c1_seq1 transc... [more]
gi|592767987|gb|GAXK01186581.1|9.261e-625.00TSA: Calanus finmarchicus comp45940_c3_seq1 transc... [more]
gi|592914828|gb|GAXK01043547.1|2.956e-427.12TSA: Calanus finmarchicus comp50483_c0_seq1 transc... [more]
gi|592932865|gb|GAXK01025688.1|9.788e-423.00TSA: Calanus finmarchicus comp2148746_c0_seq1 tran... [more]
gi|592750188|gb|GAXK01204225.1|1.249e-323.46TSA: Calanus finmarchicus comp410769_c0_seq2 trans... [more]
gi|592932864|gb|GAXK01025689.1|1.474e-323.00TSA: Calanus finmarchicus comp2148746_c0_seq2 tran... [more]
gi|592750189|gb|GAXK01204224.1|1.676e-323.46TSA: Calanus finmarchicus comp410769_c0_seq1 trans... [more]
gi|592804928|gb|GAXK01149640.1|6.218e-322.62TSA: Calanus finmarchicus comp1082103_c0_seq1 tran... [more]
gi|592914827|gb|GAXK01043548.1|8.205e-328.41TSA: Calanus finmarchicus comp50483_c0_seq2 transc... [more]
gi|592837220|gb|GAXK01120324.1|2.863e-227.72TSA: Calanus finmarchicus comp986163_c0_seq1 trans... [more]

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BLAST of EMLSAG00000007312 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000073120.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s410:64503... [more]
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BLAST of EMLSAG00000007312 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007312 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007312 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold1185_size56580-snap-gene-0.131.041e-1427.16protein:Tk10351 transcript:maker-scaffold1185_size... [more]
maker-scaffold1185_size56580-snap-gene-0.161.445e-726.67protein:Tk10355 transcript:maker-scaffold1185_size... [more]
maker-scaffold368_size193847-snap-gene-0.349.769e-722.10protein:Tk09999 transcript:maker-scaffold368_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s410supercontigLSalAtl2s410:645031..652161 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s410-processed-gene-6.19
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000007312 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000007312EMLSAT00000007312-703159Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s410:645031..652161+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000007312-690078 ID=EMLSAG00000007312-690078|Name=EMLSAG00000007312|organism=Lepeophtheirus salmonis|type=gene|length=7131bp|location=Sequence derived from alignment at LSalAtl2s410:645031..652161+ (Lepeophtheirus salmonis)
CACATACAAGTCTTATCTTATCTTCTATTTTAAGCAAATGTTCCCTTAAT AACAATGATTACTTCAACTTTGTTTTTTATAGTTTGTTTTATTGGAGTGA ATATATCATCGACCAATTAAGTTTAAAATTATAGAAACAGCCATGTGGGG ATTTATTGCTGTACTCCTGCCGTTTCACATCCTTCTCAATCCGCTCCCTA TCCACGCAGTCAATATTCAAAGTATGTCTATTTCAGGTCTAGGTGAAACT CCGGAGAAACCTGTAAATGAAGGTAATTCAATGATCATTTAGTTAATTGC ATACACATAAGAAACCCTAGGTACTGGAGATGAAGCCGTTCTCCGATGCG AAATCTCAGGAACATGGGATACTTGCAGATGGAAACATACCTTTGTGGTA AGTTAATATTTTTCGAACTCTTTATAACCAGTGCTGTGTCGGTCCTTATT TAGGACCGAGCAAGGACCAATAGGACAGGTATGTATGTAACTATCGATCC TTGGAATTTTTCATAAAAATATCAATGGTTTGTTAAGCCAAATAAGGTTT AGTGCTAAGACTGAACTGAACCGAATAAATAAGGACCGACACAACCCTAT TTATAACACATGTCCTGAAAAGTCCCTTAAGAAAAAAAAACATTTTTTTA ATTCAGTCAATGTGTGAAGCCTGGTACTTTTCAGTCCAAGTGTAATATGT GGTGCGTCAATAATCTTGACCAAAAATCATTACAAGGAGAAAATCCCAAT TAATTTATTTACTTCACATAAACATACAGCTTAATATTCAATATACATAA ATGAGTCTATTCAAGGCTTTACTGAGTGGCCCATTAAAATCTGAGCCCTT TGAATTTTAAACTTGAACAACAATTAATTTATTAACTAACAATATAATTT TAACAAATCAATACCATAAATAGATGTGTGTATGAGCTCTCATAACCATG AATGGTGCCGCAATGATTACTTTTCTCGACTTGTCCGTAAGCTAAAGAGC TTAGGGTTGTTTTGTTACTAATTGTTTATTCTTTAATTTATATAAATATG AATTAATTTAAATCCCTCAATTTCTATTGAATTTGTAAGTGTTCAGATTT CAATGAACATCCGGAACATTCAAATTCGTAGGATGGGTTAAGATGGCCCA GATTATTATATATTGATTAAAACCTTCATTTGATTCATGATATTTAATTT GGATCCGATAAGGCCCCTTTAAAGTAAATTTCAAATTTTTAATATTGTGA CGACCAACTTGATAGAAAATTCATCCAATAATACAAATGTAATCCAAAGC CAATTTTGAGAAAAATCCGCCTAGCTTATTTTTATATTGACGGGTAATAT ATTTGTTAGTTTTCGGACTAAATCGAAAATATTTTTTTTTGGGGGGGGGG GGGGGGGGAGGAGCCGTCTTTAATGGGTTTTTTTAGTCCCATATGTACAG TTATTTCGTTACATTTAGAAATTCCGACTGTGGAACGAAATTTCCTTATC TTAAACAAAATGACGTGGGACAGGATCAAGGCCGGATTTTACTARAAAAC GGGCCAGACAGATTTATTTAAAGTTGTAGCGGTCAAAGACTGGTCTTGGA TTTTTTGACGAAAATCTAATTCTTAAATTGAACTTGTATACAAATACAAA TGGTACACTTTGCAACCAAAAAATTAAATAAAAAATTTTAAATCAAGTAT TTACGGTACACTTTTGATGAGGATACTACAATTATAAATAATTAGTTTAA TGTTNNNNNGGTTGGTAAGGAGTTGCACTGATAAATCATACGAAAACATT GAGGTAGTACAATTACTCCATCTAACCCAGGAATCTTGGTGTAAAGTACA TATACATACATATAGTATATTTCTTTCTCTAGGAATCAACTGGGTCCATA CCTACGCAGTTAATTCATGGACAACGCGCTCGAGGAGAAATTATTCTCTT GAACTCAATGTGTCTATAATATAAGGTTCACTTACACTTAATCAGTGTAA ATCCATCTGACCAGTTAAAGGAATATAAAAATAGATGAACCTGATTTGAA CGGTGACTTTTCAAAAACTTACAAAAGCTTTTTTTTGCGAGTTAAATAAA AAATAATTTGAAAGGTCCGTGCAAAGTCCAAGAGACGGCACTACTGGTTC GTATCGAGGTTATTTTTAGTTAGTAGCATCTCTTGGAAGAACACACATCA ATTTTCAGCCAGATTGGTCTGTCTCTTTCTGTTTGACATTTGTTTGAATG AAAATTACTAATTGTGCATCAGTATTTTTATGCACAACATGACAAATCAG GAAATTTAATTGAACATAAATTGTAAAAATTATAACATGTATAAACAGCC CGTTTGTTTTCAACTTTTTTCGAATTTCGATTCCGGCTAGTGCAGAAAAG TTGTCAATTGTTCAGAAAATAACCTAAGCTCAATTTTATTGTTCTAGGAT GTCATCCGTTGGTCGCACATATCGTTCAAAGTATGAACGGAGACAATAGT TCCTTATTGCGTCAATAAAGATTAAATTAAGGTATTAATCATTATTTTGC ATTATTTAATTATAAAAGACATTATTATAACCTACAAAAAAAATCAATGA AATATTATTKTAAAGGTGACCTAGGGAACAAAAAGAAAAAAATGGTGCAG GTTATACGTTAAATGTTGRAAATATATTTTATAGGTGAAAAAATGATTTA TTACAAAATAACTGAAAATGCCTTCTTAGTATCTTATTTGACTTAAAATG AGTACTTCGTCTTTTGCCATATCGAATTTGATCGAGATGTGCGACTATAA ACGACCTCGTAGGACATTGCAATTTTGCATTCGTATTTTTAAACCATATC ACAACTTTTCTGCGCTAGCCATAATCAAAATTTAAAAAAAGTTGAAAACA AGCCACTCTAATGGACAGATATTCAGAGTTAGGGACAAGTATGTAATGTG TCAGTTTTTTATCTAGGACTGTGACTGTAGTCCCGTCCAATACAGTCTGG ATCTAGTCTAGTTCAGTCCTGAATATCAGTCCTAAGAACCTATAAAGTTT GGTCCTGGATTATGTTACTTAACTTTATTTTTACTTGTGTATAGTATAAG AACCTCGAGACTGACTTGACTTGGATTCCAAAGCTGATCCTCACCTTTAC CCACCTCTCCAAAACTAAATTATCTAGGTTCTTACCAATTTCAGTCCTTA TTGAGCAATGAAGACTGGACTTCCGTCCCTTTTCGGTTATGTTACTTAAC GTCAATCAAATGTATTTCTTCTTTTTTTAATCACTTCTATTKCCGCCAGT CCCAAGGACTGGCGGMCTTWAGAAATTGTCCCAGAGACTGAACAGCTGGT CCTTTGACTGGMCTGGTCAAATAAATAAGGAGTGGCACAACAAGCGTAGG AACTTGGACTCGAGACTTGCGACTCGACATGAACTCGAGTCCCCATTTTG AAGACTTATGCCTCAACTTGATCATACAATAAAAGACTCGAGACTTGACT TGGATTCCAAAGCTGATCCTTGCCTTTCCCCACCTCTCCAAACATTCTAA CTGTATCTGTATGTAATTCATATCTCTATTATATATATACATTTTTTAAG TCCAAAACGTTACAGTTGTTTTTGGAAGTCAAGGAGACTAGATAAGGGGG TTGAGTTATAAATTAAAAAGTGACTCGCGTTTCAAAAACAATTAATTAAA TGACGAAGTTTTTTGAATTTATTGAAAATCAAAAAGATATGGGCAAAATA AGAAATCAGTGAAATTTGGAGTTTCATTTTTTTATTATGTGCAAAAAAAT GTATTTACAATGGACTACTGTATTCCTAGATACAATAAAGGTTTCACAAA TTTATCTGTTTGCATATAAAATTGACACATAAAAATTGGTGCTTAATTAA AATATCTGCCACTTTCTTACTAATTTTTCCATTTTTTTAATTTTTTTTTA TTTTCTTCTCTTTTTTTTAATTTAACGTCATTTTTTAATTTTTTTAAGAA AAAATACAACAAAACGATGAATTTTCTACATCATTTTAGTTTCTTATTTT CTAAAGAGTATTTTTAATTTCTTAAATATTTGATTACATCATTTCTTCAA TATTTGCACAAATTAACCATTTATCGACGACATTATTGTCTATAACTTAT TTGCTTTTTCAAGTGTGAAAACAAAATTGGTAGGTTTGTGTTCCTCTTTG CAATGCCAAAAATATTTCTTAAACTTTTGTTACAAAATTAGTAAAAAAAT CGTTTTTCCAATTTTCTTTGCAAATTTGGATGTGGCGTTTTTTGTTCTTT TAGATATTTATTAACAAAAATTAAAGTTGGAATTTTACTCTAGACAGATT TGTTCATTCATAAATGTTGATGTGTTATTTGAAGTTCATAGCACATTTTT TTTTAAATTCATAATAATACATATATTAATAATGTTGTCCCGCACCGAAG GTGTCCAAATATTAAGAAGAAATCACATTGACCATTGCCAATGTGATTTC TTGCTCCATTCTTGGCTCSAGCATCTCCGGGTAACCCCTGGCTAGTATAT AATATATATATAACATGTCAAAATTTGGATGATTAGAAATTTAGATTAAT CAATATTAACATATTTAGAAAGAGAATACTGATACACAAAGCCTTTTCTA CTGCTCAATTATCCAAGGGACAGCCTCGAATACATGCGACCCAGAAAATG TCGACACGGACTATAAAAGGAGGTAAAAATAAATTATTGTTTTAGGTTGT CTAAAAAATATAAATCATACGTTTGTACATCTAACTTAGAATCAAAATTG AAGCCAAATCATCTTCCTGCGAGCTGAAAATCAGTAATCCCAACTATTTG GATAGTGGCGAATGGGAATGTTATGTATCAGGGGGTGCAGAATCCAATTT TATACGGGGGTTAGTTCATATATTAATCGTCAATAAATGGTTCTACTCCA CTCTAATAAGTGGAGTTGTAAATTCTAAACACTGCCGGTATATACGAGGG TTGTTTGAAAAGTTTGTAAAAAGACCGAAGATGGCACCTACTAGCACGTA TTGAGATTATTTTTAGTTAGTAGCATCTCCTGGAAGAACAAAAATCAACT TTCAGCCAAATTAGTCTATATTACTCTGTTTGGAATTCGTTTGAATCGAA GAATCAGGCTGAAAGATTAGGGGGACTGTCTTTTGAATTCACAAGGACAA ATCAAAGTCGGAATAGGAATCTGGAATAGGGTCAAACTATTACATGTGTA TGTTGTTAATCCTTATTGGACCATTTGCAAATCGAGCTTCAAAAAAATGC CCKCAATTGACCCCCCCCCCCCAAAAAAAACACACATTTTCCATCACGAC AATGCACCAGCTCACACCTCAGCAATTTTGGTTGCAAAATTAATGGAAAT AGGGGTTTAACTCGAGACGCACACAGCACTAACAACCTTACACACCTTCA TTCTTCTTTCGTCCATCACCATATCACGGATTTTATCAATGATTTCTGGA ATAATAACCTAAACAAAGCGTACATAACGTTCAGCGTCACTTGTGCCCAT ATGGCCACTCCAAAAACTTTGAAACATCTTATATATTGTTCTAATCGAAA GTACAAAGTTCCTCATAGTTTACACAAACTTTTCAAACGAACCTCTTAAA TAAAAAAAAGTAAGCGAAAACATTGACATTGTAACCCTGACAATTTGAAG AATGTTTGGGAAGAGCACAGCTTAGTTGTCATGACGTTTTATCAGATTAG CTGCAAGCAGTTATAAGAGGATGGAGAGAAACAAAAATCCCACTTCGTAT CTACTATGAGCATCGATAATAATAACTCCGATTTGTCGATCCTCAATTTC AATCCAAGTCCAACAAATCCACAGTGTTATTTTCCATTTTTCATGATTAC ACGCCCTTCATACATAGATGTTATCTTCTCAAGAATAAAGAATTATAATT TTTGGGTCATTTAAAAACGACGTGATCATTTTTTTACATAATGTTTACCC CTCCCCACCCACCATGTGGAGATATGGGTGACTTTCGGAAATATAATACT GGGCCTAATTTAACGTTTTTTTTATCCAAAAAAAAAAAATTTTAAGACAA AGATCGATCCTTTTCTTCAATTTACGTCTCATTATCCATATGACGTCTTT ATACCACATTTACCTATTATTCAGGTATACAATGTTTTAATTAGACCCCC TCCTTAACGAGGATAGACGTGTTTTTAAGTCTTACCCTTCCCTCAGGTGC ACACTTGGTTAGTGAATGTCTCTTAACAGCTATGGAAATTACAAAACACT GTTCAAATTGTCAACTACAAAAAATATCGGGCACTAAAAAATCCTTCGAA TTTACAACTCTACAGTAACATGGTGTATTTTTAATTGCTAACATTATTTT CTATTGTAGAACAACTGAGATTTTTGTATCAAGACGGGCAGAACTATACA TTTCAGAACCTGATATGGAAACAAATAGCAATCAGTACATCGTACTTGAT ATGGRAAGTAGTCGACCCAAGTTGTACGCAAAATGCCGAGCTTATCACGC CATTCCATACCCTCAATTCCGTTGGTATGTGAATGAGGTCAATCCAAGGA GTGAAATCAAGGGTCAGGATGCTCAAATCAGTTTACGACCACCACGAACA GACTCAAGGGGGCAATATACTGAAGGTTCATTGGATTGGGGTCCAAAAGA TCTTTGTCAAAATTACAATATTGAAGCAGATCTTTGCAAAAAAGAAGAAT TTGAATTCGATTTACTTTGTATCATCGATCAAGCAGAATACTATATGGCT GAGAACGAAGATAATGTTCAAAGGGTAATGGGAAATTGTTATATGTCTCT ATGAAATTGTTATAAATTGTAATTTTATATTTAGGTTACAACAAGAGTTA TTGGAAACTCGAGCAGGAGGATCATTGCTTCTGGGATCATGATATTGGTT GTCTCATGCTTCGTAGCCTTTTTTTAATTAATTACTAATCTTTAAAGACA TTTATCTTGGTCCTTTTTTTCTCAATAGGCAGTAAACAATAAAAATATTT GTAATAATATTAAAGCAATATATTATTAAATGTTCAATTTCTTAGACAAT TTTGAATTTAAATAGTAAAAGTATATTATTA
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