EMLSAG00000007658, EMLSAG00000007658-690424 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000007658
Unique NameEMLSAG00000007658-690424
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000007658 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4452:5698:6303:-1 gene:EMLSAG00000007658 transcript:EMLSAT00000007658 description:"snap_masked-LSalAtl2s4452-processed-gene-0.1")

HSP 1 Score: 355.91 bits (912), Expect = 5.254e-126
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAHRVEFKRSKKLTTPRN 187
            MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAHRVEFKRSKKLTTPRN
Sbjct:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAHRVEFKRSKKLTTPRN 187          
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000010468 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6969:1137:2933:1 gene:EMLSAG00000010468 transcript:EMLSAT00000010468 description:"maker-LSalAtl2s6969-snap-gene-0.2")

HSP 1 Score: 256.914 bits (655), Expect = 7.413e-86
Identity = 143/191 (74.87%), Postives = 155/191 (81.15%), Query Frame = 0
Query:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQ------------------EVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAHR 173
            MLQAEITSLSNS SFNQ ENLKFVDPQVGCVKE EDLDRKLLRTGRIHEF RVR LKKV E    INELRLAQ+LK+ EESHK LLVQELKKAE+ YELRKVHELKKAEETH+SLLYQ LKKV+EVNELHLAQ                  E+KKA+ETHK LR+Q LK+V+ELHELRLFKELKKA + H+
Sbjct:    1 MLQAEITSLSNSLSFNQQENLKFVDPQVGCVKENEDLDRKLLRTGRIHEFXRVRALKKVHE----INELRLAQELKRXEESHKYLLVQELKKAEDAYELRKVHELKKAEETHQSLLYQVLKKVDEVNELHLAQELKKLKKVEDAHALRIVYELKKAEETHKSLRVQELKKVKELHELRLFKELKKAEDPHK 187          

HSP 2 Score: 85.5001 bits (210), Expect = 2.465e-20
Identity = 59/118 (50.00%), Postives = 83/118 (70.34%), Query Frame = 0
Query:   48 HEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHE-LRLFKE 164
            H+  RV+ELKKV+E    ++ELRL ++LKKAE+ HKSL VQ+++KA +T EL ++H+L+K EE  KS L Q+L K E V E   AQE+KKA ET+  LR + LK  ++ H+ LR+  E
Sbjct:  156 HKSLRVQELKKVKE----LHELRLFKELKKAEDPHKSLRVQDVQKAHDTQELYRIHKLQKVEEVPKSFLVQQLPKAENVCESLRAQELKKAGETYASLRAEVLKRAEKTHKSLRILVE 269          
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000006725 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3765:2827:7885:1 gene:EMLSAG00000006725 transcript:EMLSAT00000006725 description:"maker-LSalAtl2s3765-snap-gene-0.3")

HSP 1 Score: 192.586 bits (488), Expect = 3.286e-62
Identity = 103/150 (68.67%), Postives = 120/150 (80.00%), Query Frame = 0
Query:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXL 150
            MLQA+ITSLSNS SF Q EN+KFVDPQVGCVKEKEDLDRK LRTG IHEFRRVRELKK       INELRLAQ+LKKA+E+HKSLLVQ LKK E+ YELR V+ELKKAE+THKSL  QE++K  +  EL+  Q+++K +E HK   +Q L
Sbjct:    1 MLQAQITSLSNSLSFIQQENVKFVDPQVGCVKEKEDLDRKFLRTGMIHEFRRVRELKK-------INELRLAQELKKAKETHKSLLVQVLKKVEDAYELRIVYELKKAEDTHKSLRVQEVQKAHDTQELYRIQKLQKVEEVHKSFLVQHL 143          
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000005035 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2628:842:2360:1 gene:EMLSAG00000005035 transcript:EMLSAT00000005035 description:"maker-LSalAtl2s2628-augustus-gene-0.2")

HSP 1 Score: 176.792 bits (447), Expect = 1.701e-53
Identity = 109/188 (57.98%), Postives = 137/188 (72.87%), Query Frame = 0
Query:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKA---------------EETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAHR 173
            +LQA+ITSLSN+ S  + EN+KFVD  V  VKEKEDL+RKLLRT +IHEFRRVR LKK E+    I++L LAQ+LKKA+E++KSLLVQELKKA               EE + LR+V ELKKAEE H+SLL QELKK EE +   LAQE++KA+E HK   +Q LK+ ++ +ELRL +ELKKA E H+
Sbjct:   24 ILQAQITSLSNTLSLYKQENVKFVDSLVRYVKEKEDLERKLLRTEKIHEFRRVRALKKAED----IHKLHLAQELKKADETYKSLLVQELKKAQTALELPRVRVLKEMEEIHTLRRVQELKKAEEAHQSLLAQELKKAEEAHRSVLAQELEKAEEAHKSFLVQELKKAEDNYELRLVQELKKAEETHK 207          

HSP 2 Score: 95.9005 bits (237), Expect = 1.013e-23
Identity = 69/144 (47.92%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   26 PQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEI--NELR---------LAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHE 158
            P+V  +KE E+          IH  RRV+ELKK EE+   +   EL+         LAQ+L+KAEE+HKS LVQELKKAE+ YELR V ELKKAEETHKSL                AQE+KKA  THK +R++ LK+ ++ HE
Sbjct:  119 PRVRVLKEMEE----------IHTLRRVQELKKAEEAHQSLLAQELKKAEEAHRSVLAQELEKAEEAHKSFLVQELKKAEDNYELRLVQELKKAEETHKSL---------------QAQEIKKAWRTHKSIRVRELKKAEKAHE 237          

HSP 3 Score: 54.6842 bits (130), Expect = 1.906e-9
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   48 HEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQ 148
            +E R V+ELKK EE+   +     AQ++KKA  +HKS+ V+ELKKAE+ +E  +  E K+  ET++SL                A+ +K+A+ETHK LRIQ
Sbjct:  191 YELRLVQELKKAEETHKSLQ----AQEIKKAWRTHKSIRVRELKKAEKAHESLRALEQKRTLETYESL---------------QAELIKRAEETHKSLRIQ 272          
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000001697 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1293:85547:86422:-1 gene:EMLSAG00000001697 transcript:EMLSAT00000001697 description:"snap_masked-LSalAtl2s1293-processed-gene-0.12")

HSP 1 Score: 165.622 bits (418), Expect = 2.598e-50
Identity = 106/186 (56.99%), Postives = 129/186 (69.35%), Query Frame = 0
Query:    2 LQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYE---------------LRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAH 172
            LQ +ITSLSN+ S  Q EN+KFVD  V C KEK DL+ KLLRT + HEFRRVR LKK E+    I++L LAQ+LKKAEE++KSLLVQELKKA+ T E               LR+V ELKKAEE HKS+L +ELKK E   EL L QE+KKA+ETHK L+ Q +K+    H+L   +ELKKA +AH
Sbjct:   27 LQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAED----IHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAH 208          

HSP 2 Score: 78.9518 bits (193), Expect = 3.539e-18
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0
Query:   46 RIHEFRRVRELKKVEESXPEI-----------NELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQ 148
            +IH  RRV+ELKK EE+   +            ELRL Q+LKKAEE+HKSL  QE+KKA  T++L +V ELKKAE+ H+SL   + K+  E  E   A+ +K+ +E++K LRIQ
Sbjct:  131 QIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQ 244          
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000005086 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2690:5411:8123:-1 gene:EMLSAG00000005086 transcript:EMLSAT00000005086 description:"snap-LSalAtl2s2690-processed-gene-0.3")

HSP 1 Score: 113.62 bits (283), Expect = 1.805e-31
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEE 61
            +LQAEITSLSNS SFNQ ENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVR LKK  E
Sbjct:  109 ILQAEITSLSNSLSFNQQENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRVLKKFHE 169          
BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Match: EMLSAP00000006001 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3250:4595:5221:1 gene:EMLSAG00000006001 transcript:EMLSAT00000006001 description:"maker-LSalAtl2s3250-augustus-gene-0.0")

HSP 1 Score: 103.99 bits (258), Expect = 7.785e-29
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MLQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRV 53
            MLQAEITS SNS SFNQ ENLKFVDPQVGCVKEKEDLDR LLRTGRI EFRRV
Sbjct:   21 MLQAEITSFSNSLSFNQKENLKFVDPQVGCVKEKEDLDRTLLRTGRIQEFRRV 73          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000007658 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007658 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007658 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 7
Match NameE-valueIdentityDescription
EMLSAP000000076585.254e-126100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s4452:5698... [more]
EMLSAP000000104687.413e-8674.87pep:novel supercontig:LSalAtl2s:LSalAtl2s6969:1137... [more]
EMLSAP000000067253.286e-6268.67pep:novel supercontig:LSalAtl2s:LSalAtl2s3765:2827... [more]
EMLSAP000000050351.701e-5357.98pep:novel supercontig:LSalAtl2s:LSalAtl2s2628:842:... [more]
EMLSAP000000016972.598e-5056.99pep:novel supercontig:LSalAtl2s:LSalAtl2s1293:8554... [more]
EMLSAP000000050861.805e-3190.16pep:novel supercontig:LSalAtl2s:LSalAtl2s2690:5411... [more]
EMLSAP000000060017.785e-2990.57pep:novel supercontig:LSalAtl2s:LSalAtl2s3250:4595... [more]
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BLAST of EMLSAG00000007658 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007658 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007658 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007658 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4452supercontigLSalAtl2s4452:5698..6303 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s4452-processed-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000007658 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000007658EMLSAT00000007658-703505Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s4452:5698..6303-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000007658-690424 ID=EMLSAG00000007658-690424|Name=EMLSAG00000007658|organism=Lepeophtheirus salmonis|type=gene|length=606bp|location=Sequence derived from alignment at LSalAtl2s4452:5698..6303- (Lepeophtheirus salmonis)
TCTTTAAATTGTGGGTTGGAAGTGGCTGTCCAGTCGGAAGAAATGCTACA AGCAGAGATTACTTCATTGTCAAATTCCTTTAGTTTCAACCAGTTGGAAA ATCTTAAGTTTGTCGATCCTCAGGTTGGATGTGTGAAGGAAAAGGAAGAT CTTGACCGTAAGCTCCTAAGAACTGGGAGGATCCATGAATTCCGTCGTGT TCGAGAGCTCAAAAAAGTGGAAGAGTCCCANCCTGAGATCAATGAGTTAC GTTTAGCCCAAGACCTCAAAAAAGCGGAAGAGTCCCATAAATCTCTTCTA GTTCAAGAGCTCAAAAAAGCTGAAGAAACCTATGAATTACGTAAAGTTCA TGAGCTCAAAAAAGCTGAAGAGACCCATAAATCCCTTCTATATCAAGAGC TCAAAAAAGTTGAAGAAGTCAATGAATTACATTTAGCTCAAGAGGTCAAA AAAGCGAAAGAGACGCATAAATATCTTCGAATTCAAAWGCTCAAAGAAGT TCAAGAGCTACATGAATTACGTCTATTTAAAGAACTCAAAAAAGCCGTAG AGGCCCATAGAGTAGAGTTCAAGAGGTCCAAAAAGCTCACGACACCCAGG AATTAA
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