EMLSAG00000007695, EMLSAG00000007695-690461 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000007695
Unique NameEMLSAG00000007695-690461
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Match: EMLSAP00000007695 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4487:6203:6885:-1 gene:EMLSAG00000007695 transcript:EMLSAT00000007695 description:"maker-LSalAtl2s4487-augustus-gene-0.1")

HSP 1 Score: 344.354 bits (882), Expect = 4.374e-122
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MKLLNCIVLIQIIFLVLEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTNKTLQMFIYKEQDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
            MKLLNCIVLIQIIFLVLEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTNKTLQMFIYKEQDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL
Sbjct:    1 MKLLNCIVLIQIIFLVLEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTNKTLQMFIYKEQDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Match: EMLSAP00000008241 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4989:1444:2126:-1 gene:EMLSAG00000008241 transcript:EMLSAT00000008241 description:"maker-LSalAtl2s4989-augustus-gene-0.2")

HSP 1 Score: 340.117 bits (871), Expect = 2.637e-120
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0 
Query:    1 MKLLNCIVLIQIIFLVLEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTNKTLQMFIYKEQDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
            MKLLNCIVLIQIIFLV+EFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTY ITGNDPRSKTFGFLIRKNQEQLE VDIFGKTYWSLSNYTNKTLQMFIYKE+DIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL
Sbjct:    1 MKLLNCIVLIQIIFLVVEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQLEPVDIFGKTYWSLSNYTNKTLQMFIYKEEDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Match: EMLSAP00000002072 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1386:21225:21705:-1 gene:EMLSAG00000002072 transcript:EMLSAT00000002072 description:"maker-LSalAtl2s1386-snap-gene-0.5")

HSP 1 Score: 210.305 bits (534), Expect = 7.369e-70
Identity = 103/124 (83.06%), Postives = 107/124 (86.29%), Query Frame = 0 
Query:   46 MTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTNKTLQMFIYKEQDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
            MTELGISEDVIKVYIQGILATLNIFYTPT FTY ITG DPR+KTFGF IRK Q+Q E VDIF +TYW +S YTN TLQ FIYKE DIE  F TMKMDITEMGFL FSVQAPNFSQKAFTLFHKL
Sbjct:    1 MTELGISEDVIKVYIQGILATLNIFYTPTPFTYVITGKDPRNKTFGFPIRKYQQQFEPVDIFEQTYWYMSYYTNNTLQRFIYKEHDIETLFNTMKMDITEMGFLNFSVQAPNFSQKAFTLFHKL 124
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Match: EMLSAP00000011118 (pep:novel supercontig:LSalAtl2s:LSalAtl2s7539:315:1161:-1 gene:EMLSAG00000011118 transcript:EMLSAT00000011118 description:"maker-LSalAtl2s7539-augustus-gene-0.0")

HSP 1 Score: 69.3218 bits (168), Expect = 1.041e-15
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 0 
Query:    1 MKLLNCIVLIQIIFLVLEFCSAQNVS-SFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEA 103
            MKL++ I  +QI+ LV++FCSA      F G W E++ SR    +VM  LG+S+++IK Y +G    L+I Y P    Y   G D       + I+ N ++ ++
Sbjct:    1 MKLIHYIAFVQILVLVVDFCSATXFPXKFVGNWCEDKASRSKVSDVMRXLGLSDELIKKYEEGNPMKLDIVYNPXKNDYIFNGTDSIXXXIXWTIQXNSKRKKS 104
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Match: EMLSAP00000000582 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1099:41129:41757:-1 gene:EMLSAG00000000582 transcript:EMLSAT00000000582 description:"maker-LSalAtl2s1099-snap-gene-0.11")

HSP 1 Score: 63.929 bits (154), Expect = 1.829e-13
Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 0 
Query:    1 MKLLNCIVLIQIIFLVLEFCSAQNV-SSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTF--GFLIRKNQEQLEAVDIFGK-TYWSLSNYTNKTLQMFIYKEQ 130
            MKL+  I L+Q   LV+++CSA    S F+G W E   +R   QE MT+L    +    Y+      L I Y  T   + I G DP    F   F  + N+    A D FGK  Y+  ++Y N+ L M  Y +Q
Sbjct:    1 MKLIKYIALVQTFLLVVDYCSADTYESPFQGKWCEYCSTRDQVQEFMTKLEFPRETTATYVNANPVNLTIHYNQTNQMHVIYGQDPTGVDFQLNFPWKANRFFTRA-DFFGKHAYFKSAHYENE-LFMNFYPDQ 132
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Match: EMLSAP00000003904 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2110:17074:17924:-1 gene:EMLSAG00000003904 transcript:EMLSAT00000003904 description:"maker-LSalAtl2s2110-snap-gene-0.2")

HSP 1 Score: 43.8986 bits (102), Expect = 9.237e-7
Identity = 22/74 (29.73%), Postives = 40/74 (54.05%), Query Frame = 0 
Query:   46 MTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTN 119
            M  +G+S+++IK Y  G  A L+I Y P    Y + G DP +    +   + Q++ +A  IFG+ ++  + + N
Sbjct:    1 MKLIGLSDELIKQYEVGSPAKLDIDYKPFEDVYIVNGTDPIAHLLNWTFERKQKEKKAEQIFGQNFFFRTTFRN 74
The following BLAST results are available for this feature:
BLAST of EMLSAG00000007695 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007695 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007695 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 6
Match NameE-valueIdentityDescription
EMLSAP000000076954.374e-122100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s4487:6203... [more]
EMLSAP000000082412.637e-12097.63pep:novel supercontig:LSalAtl2s:LSalAtl2s4989:1444... [more]
EMLSAP000000020727.369e-7083.06pep:novel supercontig:LSalAtl2s:LSalAtl2s1386:2122... [more]
EMLSAP000000111181.041e-1534.62pep:novel supercontig:LSalAtl2s:LSalAtl2s7539:315:... [more]
EMLSAP000000005821.829e-1334.33pep:novel supercontig:LSalAtl2s:LSalAtl2s1099:4112... [more]
EMLSAP000000039049.237e-729.73pep:novel supercontig:LSalAtl2s:LSalAtl2s2110:1707... [more]
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BLAST of EMLSAG00000007695 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007695 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007695 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000007695 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4487supercontigLSalAtl2s4487:6203..6885 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s4487-augustus-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000007695 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000007695EMLSAT00000007695-703542Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s4487:6203..6885-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000007695-690461 ID=EMLSAG00000007695-690461|Name=EMLSAG00000007695|organism=Lepeophtheirus salmonis|type=gene|length=683bp|location=Sequence derived from alignment at LSalAtl2s4487:6203..6885- (Lepeophtheirus salmonis)
ATGAAACTGTTAAATTGTATTGTTCTAATTCAAATAATTTTTCTTGTTCT
GGAATTTTGTTCTGCTCAAAAGTAATAAGTACATCTACATTATGTATCTT
TAAAAAATATAACAAATTATATTATTTCAGTGTTTCAAGTTTTGAAGGAA
CATGGTCTGAAAACGAAGGATCGCGAGTCAATTTTCAAGAAGTCATGACA
GAACTAGGTAAGCTTGACAAAATCTCTATCTSATCAATAAATTTATTTTT
CACAATTTTCAGGTATATCTGAGGATGTGATTAAGGTATATATTCAAGGC
ATATTGGCAACCTTAAACATATTTTACACACCAACTGCTTTTACTTATGY
GATCACTGGCAATGGTATGATCATATAGGTTCAAAAGTAATTATAACCAT
TCATATAACTTTTTTAATTTTAGATCCTCGTAGTAAAACTTTTGGCTTTC
TTATAAGGAAAAATCAAGAACAGTTAGAAGCAGTGGACATTTTTGGGAAA
ACTTATTGGTCTTTGTCTAACTATACAAATAAGACGTTACAAATGTTTAT
CTACAAGGAACAGGACATAGAAGCATCATTTATTACAATGAAAATGGACA
TTACTGAAATGGGGTTCTTAAAGTTTTCAGTACAGGCCCCAAATTTCAGT
CAAAAAGCATTCACATTATTTCATAAATTATAA
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