EMLSAG00000008037, EMLSAG00000008037-690803 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000008037
Unique NameEMLSAG00000008037-690803
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000008037 vs. C. finmarchicus
Match: gi|592769371|gb|GAXK01185197.1| (TSA: Calanus finmarchicus comp4050162_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 1.261e-1
Identity = 14/46 (30.43%), Postives = 26/46 (56.52%), Query Frame = 0 
Query:   18 NKDIGIQTEHSLFLENTDNLKAELKKTKEDLCKQKVKTRGLATSSW 63
            N  + +Q++HS+ +  T    ++L  +K  L  Q + T+G+A  SW
Sbjct:  351 NLLVVVQSKHSVVVGKTQAYPSQLGTSKAPLS*QVIITKGVANQSW 488
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BLAST of EMLSAG00000008037 vs. L. salmonis peptides
Match: EMLSAP00000008037 (pep:novel supercontig:LSalAtl2s:LSalAtl2s478:610788:619728:-1 gene:EMLSAG00000008037 transcript:EMLSAT00000008037 description:"snap_masked-LSalAtl2s478-processed-gene-6.9")

HSP 1 Score: 139.428 bits (350), Expect = 1.690e-44
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MNQHPLKLPAVSEPEQKNKDIGIQTEHSLFLENTDNLKAELKKTKEDLCKQKVKTRGLATSSWRFTH 67
            MNQHPLKLPAVSEPEQKNKDIGIQTEHSLFLENTDNLKAELKKTKEDLCKQKVKTRGLATSSWRFTH
Sbjct:    1 MNQHPLKLPAVSEPEQKNKDIGIQTEHSLFLENTDNLKAELKKTKEDLCKQKVKTRGLATSSWRFTH 67
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BLAST of EMLSAG00000008037 vs. L. salmonis peptides
Match: EMLSAP00000008926 (pep:novel supercontig:LSalAtl2s:LSalAtl2s555:158054:228428:1 gene:EMLSAG00000008926 transcript:EMLSAT00000008926 description:"maker-LSalAtl2s555-augustus-gene-1.35")

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-18
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:   11 VSEPEQKNKDIGIQTEHSLFLENTDNLKAELKKTKEDLCKQKVKTRGL 58
            + EPEQKNKDI IQTEHSLFLEN DNLK ELKKTK DLCKQKVK   L
Sbjct:  296 IKEPEQKNKDIVIQTEHSLFLENNDNLKGELKKTKADLCKQKVKVNIL 343
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BLAST of EMLSAG00000008037 vs. L. salmonis peptides
Match: EMLSAP00000007720 (pep:novel supercontig:LSalAtl2s:LSalAtl2s44:1523368:1524572:-1 gene:EMLSAG00000007720 transcript:EMLSAT00000007720 description:"augustus_masked-LSalAtl2s44-processed-gene-14.3")

HSP 1 Score: 73.559 bits (179), Expect = 9.915e-18
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:   11 VSEPEQKNKDIGIQTEHSLFLENTDNLKAELKKTKEDLCKQKVKTRGLA 59
            + E EQKNKDIGI TEHSLFLENTDNLKAELKKTK DL KQKVK   L 
Sbjct:   58 IKELEQKNKDIGIHTEHSLFLENTDNLKAELKKTKADLWKQKVKVNILT 106
The following BLAST results are available for this feature:
BLAST of EMLSAG00000008037 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008037 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592769371|gb|GAXK01185197.1|1.261e-130.43TSA: Calanus finmarchicus comp4050162_c0_seq1 tran... [more]
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BLAST of EMLSAG00000008037 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000080371.690e-44100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s478:61078... [more]
EMLSAP000000089261.806e-1881.25pep:novel supercontig:LSalAtl2s:LSalAtl2s555:15805... [more]
EMLSAP000000077209.915e-1879.59pep:novel supercontig:LSalAtl2s:LSalAtl2s44:152336... [more]
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BLAST of EMLSAG00000008037 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008037 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008037 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008037 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s478supercontigLSalAtl2s478:610788..619728 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s478-processed-gene-6.9
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000008037 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000008037EMLSAT00000008037-703884Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s478:610788..619728-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000008037-690803 ID=EMLSAG00000008037-690803|Name=EMLSAG00000008037|organism=Lepeophtheirus salmonis|type=gene|length=8941bp|location=Sequence derived from alignment at LSalAtl2s478:610788..619728- (Lepeophtheirus salmonis)
ATGAATCAACATCCTCTCAAACTCCCAGCAGTGTCGGTAATCAAGGTGAA
GAACAAGTAGATTTTGTTTCCCCTCGTTCCAGGAGGGAAATGAGGAGGCA
GAACAAACAAATAGTAACCAATTTATTGATAAAGGAACCGGAGCAAAAGA
ATAAGGATATTGGGATACAGACAGAACATTCCCTTTTTCTGGAAAATACT
GATAATCTCAAAGCAGAATTAAAGAAAACGAAAGAAGATTTATGTAAACA
AAAAGTCAAGGTAAACATTCTCACAAAAAAACTCGAGCTGCTTAAAGCGA
AGGAAAATAAACACTCCAAAATTGTAAGGACTCTTCATGATAAATATACT
CCAGCTCAGGCTAAGAGAGTTTTACCCCCTAATCAAAAATGGGTGCATTA
CTCAAAAGAAGATATTGCCCCTGCCTTGATAATAAGATCAATGAGTAGAC
GGGCTTTTGAATATTTAAATATATATCTAAATCATACAAATGCCAAGCAT
TCGAACTCAAGAGAGATAGCTTCAACATTTTAAAATGAATCCAGGATTTC
AAGATGATAGCTTCAAAGTCTTTCAAGAAATGATCAAGACCGACACATTT
CAAATACAAGTTTTCTGTACTATGCTTTGATGAATGTCAAAGCAAGGAAA
AATATGATATTGACATGAAGATGCAAAAGATTTATGGGCCTCACTCTTAA
GTTCAAGTTGTTATGATGAGAGGATTAGTTGAGAAATGGAAGCAGCTGAT
CTGGTTCCATTTTGATACCACTATGACCAAGAAGCTGCTTAATGATATCA
TAATCAAAATGGAGAGCAATAGTTTTGAAATAAGACCAATTGTTTGTGAT
CTTGGGAACCACACGCTTCGTTCTGAACTTGGGATTGACAAAGGAAACTT
TTTCTTCACCAATCCATTTGATTCCCGCAGAGTTGTCTACATTTTTCCTG
ATTCTCCTCATCTTCTCAAACTCTGTAGGATTCATTTACTAGACAAAAGG
TTTATGGTTCCTACAGAGGATGGAACATTAGTCCCTCTTGTTAAGACTGA
TTTTGAGGGATTATTGATGAAAGATTCCGGATAATTTAAAATTGTTTTTA
AGCTTAAACCACTTCACTTTTACTGCGAAGGAGGAGCGAGACAACGAGTA
AGATTGGCTGCACAAGTTTTGAGWAATACAGTAGCCAAAGCTTTCACCAT
TCATAGCCAAAGTAAAGAAGCAAGAGCCAAGGAAAACGCAGTAGAAATAA
TCAACAATTGGTTTGATGTAGTTAATAGCAGGCAAGGTTATGACAAGGTC
AAGCTCAGATGTGCACTGGGTATCAATTTTGAAGATTAATTGATTGCCTT
GGAGAAAATGGAATTGTTTTTGGATACATTTAAGGTAATTGGAAGGGGAA
ATAAGATTGAATGGACATGGCAGCGCTATGCGAGTTTCAATCAAATTAAC
TCAAGTCTTGTACCATGATTTGATTTYTAATGGTCCTCTTTYTTTNATTT
TKATATCCARAACTAATCAAGATTNCCTTKWTTTTTTTTTTTNNNNNNNN
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NTTTCAAGTTTAATTATAATTTAACCAAATATTCAATATAATATTAATTA
TCTCCAAAAAAAGTACAAAACAAACATCTTCAACACATAAAGATTTACCC
TCCTCCCTCAATTTAGTAAGCTTATTATTWCCCCCCCCCCCCCTTTTTWT
TCAGTATTAAAAATAATCGAGTTCTATACAACAAAGAACCAAAACAGCCT
ACTACCATAAAACTGAGAAGTCACGTAATCAATCCTAGTCTTTAATCAAT
CCATGAATTACTTCTTGACCTAAGAGTGATATTGATGGATGATTAACTAA
AGGAATGTAAGATAAATTATTAACTAAATAATAATTGTTTCTTCCATTTA
AGGATTATGTGTTGTTTAATATTATTAAAAAAACATCACATTTTATAATT
TTACAGACCTATTCAATTAAAGAATAATAATCACGTTACATACAAAAAAT
TATAGTTATCATATGTATCTCAGATTACTGACCCCTTTAAAAAAATACTT
AAATTATTATATTTTTTWTTTWAYCATATTAYTWTAATMTATWTATTTTG
TATATGGAACTAATTAAATATTCACTTTTAATTTGATTAAAGCTATTAAT
TTTGGGGTATATATTTTTTAAAAGGCTCTTTTCTTTGACAAATTTACTTG
GTTATTAATTTCCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNACTTTAGCCTCATAAACTTTAGGCTTAGACTTCTACTT
ATGTCACACATAGGTAACACTTGTAACATATGATTTTGAACTACAAAAAG
TCGACATAACTCAAAATGGAATGGAATCATCATAGCTTATGGACAGCACG
CTCGGGAGTTATTCTCTTAAACTTTATGTGTGTGCGTTCGCGGCCCGGAG
GCTCCTAGAGAAAGATGTAAGATGCTTAATGTATATGGAAAAAAAATATG
GAACATTGGTAAAATTATTTAATTTTACAAATGTTCCTTAATTTTTTTTT
TTTTTAGATTAAGTAGAGTGTAGAATTGCATTATTACTAAATGAACTGAA
AGTTTAAACAAAAAGTATTTAGAAATATAAATTTCATTATGGTCTTTGTA
TGTACTTTCTAGGTGAAATTAGTAACTCAAATATTTTTTTATTTTTTTTA
AATACAATAAAGTCAAATAGACTTTTTGAAAAAAGTAACTTTTGTAGAAA
TACACATTATCTGCTCTTATATATTATTTATGCTATCCCTAAACAGTGGG
GAATAAAGTATTCTTCTACAAGAGTCAATGCACGATATGTGGCTTATTAT
TTTAATCATTAAACAAATATAGATATTAATAGTTATTTCAGAAAATGAAG
GCTATAAAACCATCTTATTAAAATATTTATTTTATATGAGTTATAACTAA
TGACTTGAGAATTAAAAAATATATAAGACAAACTATCGGCTCCTCCAGAG
CTGATCTATAAACCATGTATAAATAAGTGACACATAACTAACAAATGCAA
AATCACGTCAAATAAAAAGTAATAAAGTAAGTATTAAGAGATTAAAAGTC
GTACTCCACAATGTTAGAGTAAAGAAAACATCCTTCAGGGCTGGTGTCTT
TTCTAATAAAGAATTATCCAAACAAAGTTGACAAGATAACCCTTTTGATT
GAGTATGATCGAGAGAGACATAGTTCCAATATGGGAAAAAAGCTTCTTGA
GAGTGATAGAGTAAATTTAGGAAATATAAACAGGAGATCACGGATTAAGA
CATAGTCCAACATGATGATTTTACAGACCATCTGGGATAGGAATAGTCTT
AATAGTTTGTCCTAATAAGWTTATTTGGTGATTTCCAGCTMGAGAGGYAA
AMSGAGCCGCAGTCTACAATGAATGAAAGAATCAGTAATCATATCGTAAT
AACTAATATTAATAAAATATATTACAGAATGGCATAAGACTAAGGCCAAG
TGAGATGAATCCAAGAAAAGAGATGCATCTTTGTGAGATTTTAAATCTCG
TTGATAGTAAAAGTAAATAGAAATAAGAGGCCATCCATCATCTTCGAACA
AGAGCTATGATTCATCAATAAATATTCCTANNTTCTATCGATGGAATTTT
TTCCATTTCTTCAAGCCTCAACTAAGGCCACGACTATGATTAATTAACGT
GCCACCAGTCAATGAGTCCTTTCGAAATCGACTCAGCATCCCAGATCCGT
GGTTCCTTATTCTATCTTCGTATAATAATATTAAATATGTAAACAGTACA
AGATTACAGATAACTTCTTTATCATTATTCCTCTTTTCTTCATCTCCTAG
CTATATAATCAATCTGATCGAGATACAACAGTAAAGTTTGAACCGATAAT
AGAAAAACATAAAAAAGCGACGAAGATGTCATGCGACAAAATCTCCTCGA
GGAAAAATTACATATACAATATACAATAGATATMCCTTGCCTAGAACCAT
CTTTCCTACCATTATCACAACTTCCCAAACAATGTTGTATAGCAAAGAAT
GGCTACAATATTAATCAATTATCTTACTCAGTTTTTGTCAATATTGAATG
ACTTACCAAATGTTCAAATTTGAAGAAAATGATCCAGTCCTGGATCATTT
GTATCGTAAAATGGCATTGCTTTTAATAAAGGTATGAGAAGAGTTGACAA
TATGAATATTTTATATTACTTTATATAATTACCATGTCCTCTAAACATTG
AAATCATATTAGCCCCTTAATAACAAATTTCCGTGAATTGCATTCAATCT
TATGTAGAACGTCAAAGAAAAATTTCTTCGTCATCATCAAGACGGAAAAA
AAACAAAAAACAGACAACACAAACTGCTCAAATGTATAATTGTGATGACA
ATTTCCGAAGTTTGACTAAAAGTTAAATAGAAGTGATGCGGAATTTAAAA
ATAAAATTAATTTTATAGGTTGTAGTGTTTCTTTATGTAAGATAAGATAA
TAAAAAATATTTCTATTTGTATAAAATATAATGCGTATATTATATGGATA
GTATAATTTTTTTTTCGATGTATTCATTTTAAAACTTTTGTACCTACAAT
TCCAATATTACTAACTTTTGTTATGATGAATTATAACACGTTTTAAACAA
AATATTATGAATCTAACAAGAACAAATAGATATAACAATGACCTATATTT
AATTTTCTAACATTAAATAACATTCAATTTTATTACATAACTTTTATATA
TAAATTATAATTCCCATTAATTATTTTGCATCTTCATCTAGATCCTCTTC
ATATTCCATAGAAAAATTTAACTACTCATTCTAAATATACCTCAAGAAAA
GAGTAAAGAACCCATTCTCAGACCTGTATTTGAATCCACCTATTTAGTGT
TCAAATCAAATCAGAGCCCTCCTGCTCCTGGGGTTTCTGGTTCCGAGTAC
AATTCCTCATGCTCCGAGTCCATGGAAAACTAAGTAATGTATGGATCTAC
CTGTAGTCTCGACTAAGGTACGATATCCTTTTCCAAAAGCTATTCCTTAA
TCTTTGACAACACTAATTTACTTTGGGACTCCATTGAGTTTATGATAGTA
TAAAAATAAGAATAAAAAATAATGATGACAGCTTTGGTAAATAAGGCAGG
GTCTTGGAGTAAGGTGCCAACTGCAAAAATGCAGGTCCTTTTTATAATAG
CTTTTTGAACATCTCTGGAGATATCCAACGTAACATAGGAAATATCCATG
TCGAAGGAGGGAATCGACGGATGACAACAAAATACATAGAGTATTTTTGT
GGTAGTTAGGTAACTCCGTGTGAAGACTAAAGGCTAATTATATCATAACA
ATTAATTAAATAATCAACTCTGTCATAGTTTCATATTTATTTTGTATAAG
TTGAAATTTGTTGGTCTAATATATACATTATTTAATAACAAGTCATTTTC
AATACCAATTATAAATCGATACCAACTTTTCTTTTAGATTTATTAAAATT
ACATGGGGATTAATTATTATGTATTTATGACTAATATAACTGTGGGCATT
TGAACTTTATAATGTGCCACAGAGTACTTATATTTTATTAATTTTTATTA
AAAACACCATTAATATATCGATCATCTAAAAAATGTTCCATTATTTCATT
AACCTCATCCCAAGTACTGCAAATCCTTCATCTAAAATCATTACTCTTAT
TTTTGGATTGCAACTTGCATAATTTGCTTATTCAATGTACAATTTTTACA
CAACAGCTAAAGAAAAATAAATATGAAATGATCAGAGATGAAAAAAATCT
GATAATGAAAGAGGGATCAGTTTTTTTATGTTGATAGTTGCTATCTGAAA
AACTTTTTATTTTCAAAGCTGTTATCATTATTCTTGAAGAGAGAGCAATA
AATATAAGTTAATCATTAGTGCGTGAAAGACTGAGGATTTGTTGCAGAGC
CAAAAGTGTTAAGTCCTTGTATGACTCGGAGTAGAATTGAGGATCGATAG
TTAGAGTAACTCCTACCTATATCCTTCCTAGATACGGGGTGAGGATTAGT
GTTTATTTCCTTCCTTCTCGTAGCTAATTTAATGGAACGTCATGACAGCT
ATGCTGCTCTTTTCCTAAATATTCTTCAAATTATCAGAGTGACCACCTTA
ATTTTTGGTTTCTTTTTTTAGGATACTGGGAGATCTTATTTTCAGCTACA
CTAATGATGCAATTACTTAGCACAATTTGATTATAGGTAGTGATGGAAAT
TATCTATATTTTTGCATCTAAAAAAAGGAACCGAAAATCAACATGGTAAC
CCTAAAAAATTCGAAGGATGTTTAGAAGAAGAGGAGCTAAGCTGTCATGA
CATTTCATTAGATTAGCTTAAATGACTCTTAAAGTCCGTTAGATAACCTA
TAAATTACTTTCAACTGTGACATGGGAGGAAGATCTAAACAAGGACATTG
GCAATAATTACTCCGATGTTGATCCTCGATTAAAATCTCAGTCCAATAAG
GACATTGACTTATAAGATATCACTCCCTAGTAAACTTATTTAGTTACTTT
CAGTCTTTCATGAGAACCAGATATAGTTATTACTATATACATAGTTGTTC
CTACTTTCGAAAATAAAAAACTCTGTACAGTTTGCCAATTAGAAAAGGCT
GCTTCCACTGTCTAGGACATATTATTTTATACATCTCTGATTATGAGAAC
ATTTTTAATTTATTATTGAGTTTAACTATAATATAACTAAATATAACTTT
TTACGGTTCTTTTTTTGAATAAAAAAATCCCTGAATATTATAAAAATACA
TTCAATACCTACCTTAATAATACTAAATATGATCATAAAATATATAAATC
AAGGTAAATATTGTTTTGGGGTTATCTAAAGTAAAGTTCCTAAACTATTA
AATTAATTATTAAAACTGATGAATGGACCATTTAGAAATATAGTATAAAA
TTTGAATTTGTATTTATACAATATTATTATGTATTTAGTTTTCATTCAAA
TAATGAATTAATTCAATAATTTTTTGAACATTTACTTTAGAAAACACTAA
AACATAAAATATCTACTTTAATTTTTATCTGTATACATTCCATCATTTTT
TACTGAATAACTATTTTTGAAGGATTTCAAATATTAGCTCAAAATGAAAA
AGTTGATTAAAATATACAACAACCACAAATATTATAGCTGTATAAAGTTC
CTACGAGTTTACCGACATGAGTTTTTCATCAATTACAGGTTGCATGATTA
AAACTGGTGCTCCTCCAGATTGTATTAAAACTGTGGTGTACTTTAAAAAC
TCGTCGCCAGGCCAGGGGCCAGGAAGATAAGAACGTCGGGAAGAAAGAAT
AAGGCTTGATTGAGATTTAACAAAAGAGTTAATATATTCTACATAATAGA
CACGAGGACTGGCAACATCCTCTTGGAGATTCACACACTGA
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