EMLSAG00000008241, EMLSAG00000008241-691007 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008241 vs. L. salmonis peptides
Match: EMLSAP00000008241 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4989:1444:2126:-1 gene:EMLSAG00000008241 transcript:EMLSAT00000008241 description:"maker-LSalAtl2s4989-augustus-gene-0.2") HSP 1 Score: 347.821 bits (891), Expect = 2.550e-123 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MKLLNCIVLIQIIFLVVEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQLEPVDIFGKTYWSLSNYTNKTLQMFIYKEEDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
MKLLNCIVLIQIIFLVVEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQLEPVDIFGKTYWSLSNYTNKTLQMFIYKEEDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL
Sbjct: 1 MKLLNCIVLIQIIFLVVEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQLEPVDIFGKTYWSLSNYTNKTLQMFIYKEEDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
BLAST of EMLSAG00000008241 vs. L. salmonis peptides
Match: EMLSAP00000007695 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4487:6203:6885:-1 gene:EMLSAG00000007695 transcript:EMLSAT00000007695 description:"maker-LSalAtl2s4487-augustus-gene-0.1") HSP 1 Score: 340.117 bits (871), Expect = 2.637e-120 Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0
Query: 1 MKLLNCIVLIQIIFLVVEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQLEPVDIFGKTYWSLSNYTNKTLQMFIYKEEDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
MKLLNCIVLIQIIFLV+EFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTY ITGNDPRSKTFGFLIRKNQEQLE VDIFGKTYWSLSNYTNKTLQMFIYKE+DIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL
Sbjct: 1 MKLLNCIVLIQIIFLVLEFCSAQNVSSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYXITGNDPRSKTFGFLIRKNQEQLEAVDIFGKTYWSLSNYTNKTLQMFIYKEQDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
BLAST of EMLSAG00000008241 vs. L. salmonis peptides
Match: EMLSAP00000002072 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1386:21225:21705:-1 gene:EMLSAG00000002072 transcript:EMLSAT00000002072 description:"maker-LSalAtl2s1386-snap-gene-0.5") HSP 1 Score: 212.616 bits (540), Expect = 7.834e-71 Identity = 104/124 (83.87%), Postives = 108/124 (87.10%), Query Frame = 0
Query: 46 MTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQLEPVDIFGKTYWSLSNYTNKTLQMFIYKEEDIEASFITMKMDITEMGFLKFSVQAPNFSQKAFTLFHKL 169
MTELGISEDVIKVYIQGILATLNIFYTPT FTY ITG DPR+KTFGF IRK Q+Q EPVDIF +TYW +S YTN TLQ FIYKE DIE F TMKMDITEMGFL FSVQAPNFSQKAFTLFHKL
Sbjct: 1 MTELGISEDVIKVYIQGILATLNIFYTPTPFTYVITGKDPRNKTFGFPIRKYQQQFEPVDIFEQTYWYMSYYTNNTLQRFIYKEHDIETLFNTMKMDITEMGFLNFSVQAPNFSQKAFTLFHKL 124
BLAST of EMLSAG00000008241 vs. L. salmonis peptides
Match: EMLSAP00000011118 (pep:novel supercontig:LSalAtl2s:LSalAtl2s7539:315:1161:-1 gene:EMLSAG00000011118 transcript:EMLSAT00000011118 description:"maker-LSalAtl2s7539-augustus-gene-0.0") HSP 1 Score: 70.0922 bits (170), Expect = 4.714e-16 Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 0
Query: 1 MKLLNCIVLIQIIFLVVEFCSAQNVS-SFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTFGFLIRKNQEQ 100
MKL++ I +QI+ LVV+FCSA F G W E++ SR +VM LG+S+++IK Y +G L+I Y P Y G D + I+ N ++
Sbjct: 1 MKLIHYIAFVQILVLVVDFCSATXFPXKFVGNWCEDKASRSKVSDVMRXLGLSDELIKKYEEGNPMKLDIVYNPXKNDYIFNGTDSIXXXIXWTIQXNSKR 101
BLAST of EMLSAG00000008241 vs. L. salmonis peptides
Match: EMLSAP00000000582 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1099:41129:41757:-1 gene:EMLSAG00000000582 transcript:EMLSAT00000000582 description:"maker-LSalAtl2s1099-snap-gene-0.11") HSP 1 Score: 63.5438 bits (153), Expect = 2.172e-13 Identity = 43/129 (33.33%), Postives = 59/129 (45.74%), Query Frame = 0
Query: 1 MKLLNCIVLIQIIFLVVEFCSAQNV-SSFEGTWSENEGSRVNFQEVMTELGISEDVIKVYIQGILATLNIFYTPTAFTYAITGNDPRSKTF--GFLIRKNQEQLEPVDIFGK-TYWSLSNYTNKTLQMF 125
MKL+ I L+Q LVV++CSA S F+G W E +R QE MT+L + Y+ L I Y T + I G DP F F + N+ D FGK Y+ ++Y N+ F
Sbjct: 1 MKLIKYIALVQTFLLVVDYCSADTYESPFQGKWCEYCSTRDQVQEFMTKLEFPRETTATYVNANPVNLTIHYNQTNQMHVIYGQDPTGVDFQLNFPWKANRF-FTRADFFGKHAYFKSAHYENELFMNF 128 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008241 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000008241 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000008241 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000008241 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000008241 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000008241 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000008241 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s4989:1444..2126- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008241-691007 ID=EMLSAG00000008241-691007|Name=EMLSAG00000008241|organism=Lepeophtheirus salmonis|type=gene|length=683bp|location=Sequence derived from alignment at LSalAtl2s4989:1444..2126- (Lepeophtheirus salmonis)back to top Add to Basket
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