EMLSAG00000008527, EMLSAG00000008527-691293 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008527 vs. C. finmarchicus
Match: gi|592915622|gb|GAXK01042753.1| (TSA: Calanus finmarchicus comp6519717_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 6.686e+0 Identity = 16/50 (32.00%), Postives = 23/50 (46.00%), Query Frame = 0 Query: 45 FGGFENVCKNTMPTCIRDEVRCLDP---AYYFQCSKACGCTGSCLDPNXG 91 F GF N+ K M + +RC++ ++Y C K GSC P G Sbjct: 223 FAGFSNMKK--MAFALTIYIRCVELQFLSFYLSCDKGVEAEGSCATPRQG 366
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000008527 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5266:2605:5358:1 gene:EMLSAG00000008527 transcript:EMLSAT00000008527 description:"maker-LSalAtl2s5266-augustus-gene-0.1") HSP 1 Score: 285.419 bits (729), Expect = 1.307e-99 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 Query: 1 MICRPRQRPQGDFFPDTQGNSTTFNDNMKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145 MICRPRQRPQGDFFPDTQGNSTTFNDNMKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCEESCRNKLASDDACDRFNQFGYCFSTSPYS Sbjct: 1 MICRPRQRPQGDFFPDTQGNSTTFNDNMKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000011280 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:397975:398789:-1 gene:EMLSAG00000011280 transcript:EMLSAT00000011280 description:"maker-LSalAtl2s772-augustus-gene-3.36") HSP 1 Score: 156.762 bits (395), Expect = 1.020e-48 Identity = 83/153 (54.25%), Postives = 93/153 (60.78%), Query Frame = 0 Query: 28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCE-----------------------------------ESCRNKLASDDACDRFNQFGYCFSTSPYS 145 MK I QISI+S LILGVFGGF+N+CKNTM TC RDE RC+DP YYFQCSKACGC G CLDPN CL S IC+ R CPR CGVCE E+CRNK+ASDD CDRF++FGYC +S YS Sbjct: 1 MKAIIQISILSTLILGVFGGFDNICKNTMTTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAKTCGKCSETCRNKMASDDVCDRFHRFGYCLRSSNYS 153
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000011279 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:382917:383509:-1 gene:EMLSAG00000011279 transcript:EMLSAT00000011279 description:"maker-LSalAtl2s772-augustus-gene-3.35") HSP 1 Score: 138.658 bits (348), Expect = 2.591e-42 Identity = 69/103 (66.99%), Postives = 75/103 (72.82%), Query Frame = 0 Query: 28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCEESCRNKLASDDACD 130 MK I QISI+S LILGVFGGF+N+CKNTMPTC RDE RC+DP YYFQCSKACGC G CLDPN CL S IC+ R CPR CGVCE N L DD C+ Sbjct: 1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGC--NNLVHDDICE 101
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000006101 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3321:782:1958:1 gene:EMLSAG00000006101 transcript:EMLSAT00000006101 description:"maker-LSalAtl2s3321-augustus-gene-0.1") HSP 1 Score: 131.724 bits (330), Expect = 4.240e-39 Identity = 75/153 (49.02%), Postives = 87/153 (56.86%), Query Frame = 0 Query: 28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCE-----------------------------------ESCRNKLASDDACDRFNQFGYCFSTSPYS 145 MK I QISI+SALILGVFGGFENV PAYYFQCS+ACGCT SCLDP+ CL+ S IC+ +DERRRCPRFCG CE +SCRNKLA+DD C+ F+++GYC TS YS Sbjct: 1 MKVIIQISILSALILGVFGGFENV---------------WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYS 138
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000004726 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2490:10289:10675:1 gene:EMLSAG00000004726 transcript:EMLSAT00000004726 description:"maker-LSalAtl2s2490-augustus-gene-0.1") HSP 1 Score: 101.679 bits (252), Expect = 2.235e-28 Identity = 49/66 (74.24%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCL 93 MK QISI L LGVF FENVCK+TM C RDEVRC+DP YYFQCSKACGCTGSCLDPN CL Sbjct: 1 MKTFIQISIFCGLFLGVFRRFENVCKDTMTNCTRDEVRCMDPEYYFQCSKACGCTGSCLDPNAWCL 66
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000002982 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:193433:195225:1 gene:EMLSAG00000002982 transcript:EMLSAT00000002982 description:"maker-LSalAtl2s170-augustus-gene-2.7") HSP 1 Score: 88.5817 bits (218), Expect = 7.822e-23 Identity = 51/125 (40.80%), Postives = 66/125 (52.80%), Query Frame = 0 Query: 28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDER-------RRCPRFCGVCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145 M + ++ I+S + +G GGF+ C + C D V C+ P YYFQCS+ CGCTG C D L TIC R C CG C+E CRNK+ SD C FN GYC+ST+ +S Sbjct: 1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTG-CND-----LVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHS 119
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000004640 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:15271:17023:1 gene:EMLSAG00000004640 transcript:EMLSAT00000004640 description:"maker-LSalAtl2s2425-augustus-gene-0.2") HSP 1 Score: 71.2478 bits (173), Expect = 3.425e-16 Identity = 38/147 (25.85%), Postives = 67/147 (45.58%), Query Frame = 0 Query: 34 ISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCG-----------------------------------VCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145 + I+S ++ +G + +C++ M +C + +C++P YYF+C K+CGC +C D + C+ C+ +D+R C R CG +CE+ CR+ L + C+ F + GYC S Y+ Sbjct: 6 LIIISFFLVVAYGQGDRMCRDEMESCETNAYKCMNPEYYFKCKKSCGCESACTDKSIKCIQNPNKCLDRDQRFECQRVCGNCDGCEDLLEHLMCNELKNLCHNENVRYFCPATCRLCEKGCRDNLPYNMMCNNFKKSGYCDRKSIYN 152
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000007109 (pep:novel supercontig:LSalAtl2s:LSalAtl2s400:180525:182688:-1 gene:EMLSAG00000007109 transcript:EMLSAT00000007109 description:"maker-LSalAtl2s400-augustus-gene-1.7") HSP 1 Score: 66.6254 bits (161), Expect = 1.897e-14 Identity = 41/154 (26.62%), Postives = 65/154 (42.21%), Query Frame = 0 Query: 27 NMKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCG-----------------------------------VCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145 N I I+S ++ V G +C++ C D +C++P YYF+C + CGC C D + GC+ C+ +++R C R CG +CE++CR+ L D C F + G+C S S Y+ Sbjct: 23 NNMTIRLFIIISFFLVVVNGQGNIICRDEQKICKPDAYKCMNPEYYFKCKETCGCESRCTDKSIGCIQFPNRCLNQNQRVDCQRACGNCDRCEDLLNNLMCNELKNLCHNGNVRYFCPATCRLCEKACRDNLPYDIVCRSFRKSGFCDSNSIYN 176
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000002978 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:166204:168625:1 gene:EMLSAG00000002978 transcript:EMLSAT00000002978 description:"maker-LSalAtl2s170-snap-gene-1.20") HSP 1 Score: 62.003 bits (149), Expect = 6.986e-13 Identity = 43/141 (30.50%), Postives = 62/141 (43.97%), Query Frame = 0 Query: 33 QISIVSALILGVFGGFEN---VCKNTMPTCIRDEVRCLDPAYYFQCSKACGCT--GSCLDPNXGCLDXSTICIXKDERR------------------------RCPRFCGVCEESCRNKLASDDACDRFNQFGYCFSTSPY 144 +I + AL+LG +++ C + C DE CL P YY C ++CGC G C D C+D + C +ERR C R CG C CRNK+ S+ C+ F + YC ++SP+ Sbjct: 8 RIVLFCALVLGTTSAYDHEDPYCLDKEDYCTADEWNCLHPQYYHVCRRSCGCKRRGQCYDLFGDCVDFTNDCF--NERRCDNLIRDEYCENNRNLCNHPSILYLCARTCGRCRNDCRNKMLSNKVCNAFVKRRYCDTSSPF 146
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Match: EMLSAP00000012207 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:37024:45519:-1 gene:EMLSAG00000012207 transcript:EMLSAT00000012207 description:"maker-LSalAtl2s884-augustus-gene-1.11") HSP 1 Score: 53.9138 bits (128), Expect = 3.847e-10 Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 0 Query: 50 NVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCEESCRNKLASDDACDRF 132 N C++ + C D C+ PAYYF+C + CGC G+C D + C C+ + C RFCG+C + C N L D+ C Sbjct: 2 NYCRDEVHNCEADATSCIKPAYYFKCRRTCGCKGNCQDGDSACFKIPDRCLSTNG--NCYRFCGLC-DGCEN-LIKDELCKEL 80
BLAST of EMLSAG00000008527 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis]) HSP 1 Score: 71.633 bits (174), Expect = 5.061e-13 Identity = 40/147 (27.21%), Postives = 67/147 (45.58%), Query Frame = 0 Query: 34 ISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCG-----------------------------------VCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145 + I+S ++ V G + C+N M +C + +C++P YYF+C K+CGC +C D + C++ C+ +D+R C R CG +CE+SCR+ L + C F + G+C S Y+ Sbjct: 6 LIIISFFLVVVNGQGNSTCENEMESCETNTFKCMNPEYYFKCKKSCGCESACTDTSIKCINNPNKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYN 152 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008527 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000008527 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000008527 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 11
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BLAST of EMLSAG00000008527 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000008527 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000008527 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000008527 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s5266:2605..5358+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008527-691293 ID=EMLSAG00000008527-691293|Name=EMLSAG00000008527|organism=Lepeophtheirus salmonis|type=gene|length=2754bp|location=Sequence derived from alignment at LSalAtl2s5266:2605..5358+ (Lepeophtheirus salmonis)back to top Add to Basket
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