EMLSAG00000008983, EMLSAG00000008983-691749 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000008983 vs. C. finmarchicus
Match: gi|592898236|gb|GAXK01060139.1| (TSA: Calanus finmarchicus comp2409544_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 9.218e+0 Identity = 16/46 (34.78%), Postives = 25/46 (54.35%), Query Frame = 0 Query: 110 DAEVLKDNATHYNVLRFN-AYNKTSGSLVFFTQRVFTSEGYMNYSH 154 D E LKDN +NVL++ +N+ ++ T +VF EG + H Sbjct: 319 DGENLKDNFASWNVLKYAWGFNEDLAEVIDQTLQVFYPEGSYSPGH 456
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000008983 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5623:1978:2679:1 gene:EMLSAG00000008983 transcript:EMLSAT00000008983 description:"augustus-LSalAtl2s5623-processed-gene-0.0") HSP 1 Score: 352.443 bits (903), Expect = 3.777e-125 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE 171 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE Sbjct: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE 171
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000007420 (pep:novel supercontig:LSalAtl2s:LSalAtl2s421:485845:486576:1 gene:EMLSAG00000007420 transcript:EMLSAT00000007420 description:"augustus-LSalAtl2s421-processed-gene-3.2") HSP 1 Score: 275.404 bits (703), Expect = 7.678e-95 Identity = 131/170 (77.06%), Postives = 147/170 (86.47%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQ 170 MKC I VALVLVG+TTSEVSKPSFLF+GSWLEM E R+G VE L G++E +A AYS GP+TM+CI+LTE GY++TGI G PYN SITWRKEAK PYTS GVEM+FDAEVLKDNAT+Y ++RFNAYNKTSGSLVFFTQR FTSEGYMNYSHT AATK+TAYTLYQKQ Sbjct: 1 MKCFIIVALVLVGVTTSEVSKPSFLFQGSWLEMIEKRSGTVEYLMKLGVSEANATAYSKGPITMQCIQLTEEGYEITGIH-RGAPYNTSITWRKEAKRPYTSSGVEMKFDAEVLKDNATNYKLMRFNAYNKTSGSLVFFTQRTFTSEGYMNYSHTIAATKQTAYTLYQKQ 169
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000011081 (pep:novel supercontig:LSalAtl2s:LSalAtl2s7500:2079:2778:1 gene:EMLSAG00000011081 transcript:EMLSAT00000011081 description:"augustus-LSalAtl2s7500-processed-gene-0.0") HSP 1 Score: 257.299 bits (656), Expect = 1.236e-87 Identity = 126/172 (73.26%), Postives = 143/172 (83.14%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSF-GVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE 171 MKC I VALVLVG+TTSEVS PSFLFEGSWL MKE G VEXL G++ +A YSNGP+T+ECI+LTE GYK+TGIQP+G PYN SITWRK AK PY S G +EFDAEVLKDNAT++NV+RFNAY K +G LVFFTQR+FTS+GYMNYSHT AATKKTAYTLY+KQE Sbjct: 1 MKCFIIVALVLVGVTTSEVSMPSFLFEGSWLXMKEEXRGAVEXLTEXGVSVANATTYSNGPITLECIQLTEEGYKITGIQPNGAPYNTSITWRKGAKLPYKSLTGQSLEFDAEVLKDNATNHNVMRFNAYQK-NGPLVFFTQRIFTSQGYMNYSHTIAATKKTAYTLYKKQE 171
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000003905 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2111:248:1162:1 gene:EMLSAG00000003905 transcript:EMLSAT00000003905 description:"augustus-LSalAtl2s2111-processed-gene-0.0") HSP 1 Score: 245.358 bits (625), Expect = 4.595e-83 Identity = 118/171 (69.01%), Postives = 137/171 (80.12%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE 171 MKC I VALVLVG+TTSEVSKPSFLF+GSWLEMKE R+G+VE L I+E +A AYS GP TM+CI+LTE GYK+TGIQP G PYNASITWRKEA+ PY+ +++FDAEV KDNAT++N +RF AY K G+ +FFTQR FTSEGYMNYSHT K T YTLYQKQE Sbjct: 1 MKCFIIVALVLVGVTTSEVSKPSFLFQGSWLEMKERRSGIVEFLMQLEISEGNAVAYSKGPTTMQCIQLTEEGYKITGIQPDGSPYNASITWRKEARRPYS---YDLDFDAEVFKDNATNHNGMRFTAYKK-DGTPLFFTQRTFTSEGYMNYSHTNVEAKLTGYTLYQKQE 167
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000002564 (pep:novel supercontig:LSalAtl2s:LSalAtl2s15141:108:747:-1 gene:EMLSAG00000002564 transcript:EMLSAT00000002564 description:"augustus-LSalAtl2s15141-processed-gene-0.0") HSP 1 Score: 198.364 bits (503), Expect = 1.605e-64 Identity = 102/175 (58.29%), Postives = 124/175 (70.86%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPS---FLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATH-YNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE 171 MKC I VALVLVG +TSE S LFEGSWLEMKE RT VVE L+++GI+ +A Y+NGP TMECI+LTE+GYKV GI+P VPYN SITWRKE K YT + FDAEV++DN +H +NV+ FN Y + +F +R FT+EGYMNYSHT T T YTLY+KQ+ Sbjct: 1 MKCFIIVALVLVGTSTSESXTXSMSSLLFEGSWLEMKEHRTNVVEYLRVYGISSENATKYNNGPTTMECIQLTEDGYKVNGIRPDSVPYNMSITWRKEEKRVYTYPNESLFFDAEVVRDNISHSHNVMLFNVYYNKXETPIFIAERKFTNEGYMNYSHTHVGTNITTYTLYKKQD 175
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000007417 (pep:novel supercontig:LSalAtl2s:LSalAtl2s421:404527:405169:-1 gene:EMLSAG00000007417 transcript:EMLSAT00000007417 description:"augustus-LSalAtl2s421-processed-gene-3.33") HSP 1 Score: 197.978 bits (502), Expect = 2.852e-64 Identity = 103/175 (58.86%), Postives = 125/175 (71.43%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPS---FLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATH-YNVLRFNAYNKTSGSLVFFTQRVFTSEGYMNYSHTQAATKKTAYTLYQKQE 171 MKC I VALVLVG +TSE S FLFEGSWLEMKE+RT VVE L + I+ +A Y+NGP TMECI+LTE+GYKV GI+P GVPYN SITWRKEAK YT + FDAEV++DN +H +NV+ FN Y + + +F +R FT+EGYMNYS AT T YTLY+KQ+ Sbjct: 1 MKCFIIVALVLVGTSTSESCTSSESSFLFEGSWLEMKENRTNVVEYLMQYNISRENATKYNNGPTTMECIQLTEDGYKVNGIRPDGVPYNMSITWRKEAKRVYTYPNQSLLFDAEVVRDNVSHSHNVMLFNVYYEGLDTPIFIAERNFTNEGYMNYSQRHVATNITTYTLYKKQD 175
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000012552 (pep:novel supercontig:LSalAtl2s:LSalAtl2s9257:1325:1800:-1 gene:EMLSAG00000012552 transcript:EMLSAT00000012552 description:"augustus-LSalAtl2s9257-processed-gene-0.0") HSP 1 Score: 189.889 bits (481), Expect = 5.078e-62 Identity = 91/122 (74.59%), Postives = 101/122 (82.79%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATHYN 122 MKC I VALVLVG+TTSEVSKPSFLFEGSWLEMK+ RTGVV +L G+++ +A AYS GPMTMECI+LTEN +PSGVPYNASITWRKEAK PY S G EMEFDAEVLKDNAT+YN Sbjct: 1 MKCFIIVALVLVGVTTSEVSKPSFLFEGSWLEMKDKRTGVVXYXQLLGVSQANATAYSKGPMTMECIQLTEN-------EPSGVPYNASITWRKEAKMPYKSSGAEMEFDAEVLKDNATNYN 115
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000008319 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5045:700:1299:1 gene:EMLSAG00000008319 transcript:EMLSAT00000008319 description:"augustus-LSalAtl2s5045-processed-gene-0.1") HSP 1 Score: 163.31 bits (412), Expect = 5.633e-51 Identity = 87/152 (57.24%), Postives = 107/152 (70.39%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPS---FLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPYTSFGVEMEFDAEVLKDNATH-YNVLRFNAYNKTSGSLVFFTQRVFTSEG 148 MKC I VALVLVG +TSE S S LFEGSWLEMKE RT VVE L ++GI+ +A Y+NGP TMECI+LTE+GYKV GI+P VPYN SITWRKE K YT + FDAEV++DN +H +NV+ FN Y + + +F +R FT+E Sbjct: 1 MKCFIIVALVLVGTSTSESSTSSMSSLLFEGSWLEMKEHRTNVVEYLTVYGISSENATKYNNGPTTMECIQLTEDGYKVNGIRPDSVPYNMSITWRKEEKRVYTYPNESLFFDAEVVRDNISHSHNVMLFNVYYNKTETPIFIAERKFTNEA 152
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Match: EMLSAP00000002340 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1440:63867:64312:1 gene:EMLSAG00000002340 transcript:EMLSAT00000002340 description:"augustus-LSalAtl2s1440-processed-gene-0.4") HSP 1 Score: 108.612 bits (270), Expect = 7.504e-31 Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 1 MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGINETSANAYSNGPMTMECIZLTENG 73 MKC I VALVLVG+TTSEVS PSFLFEGSWL MKE R+G VE L FG++ A AYS GP+T+ECI+LTE G Sbjct: 1 MKCFIIVALVLVGVTTSEVSIPSFLFEGSWLXMKEERSGAVEYLTEFGVSVADATAYSKGPITLECIQLTEEG 73 The following BLAST results are available for this feature:
BLAST of EMLSAG00000008983 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000008983 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000008983 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 9
BLAST of EMLSAG00000008983 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000008983 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000008983 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000008983 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s5623:1978..2679+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000008983-691749 ID=EMLSAG00000008983-691749|Name=EMLSAG00000008983|organism=Lepeophtheirus salmonis|type=gene|length=702bp|location=Sequence derived from alignment at LSalAtl2s5623:1978..2679+ (Lepeophtheirus salmonis)back to top Add to Basket
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