EMLSAG00000009758, EMLSAG00000009758-692524 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592804165|gb|GAXK01150403.1| (TSA: Calanus finmarchicus comp786467_c0_seq6 transcribed RNA sequence) HSP 1 Score: 45.0542 bits (105), Expect = 8.953e-6 Identity = 19/67 (28.36%), Postives = 39/67 (58.21%), Query Frame = 0 Query: 69 VLVMIPQNLVKAIQILSKDTSTI--VQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 +L+ + ++ +I++ + S + Q LA+ G + PC+++ P D L++WYK + G+P+YS Sbjct: 226 LLIFLQTRVLTSIKLHTSTISPLDTTQVLAVEGHQSFFPCDLTPPNPDEAVYLVLWYKEDQGEPLYS 426
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592804167|gb|GAXK01150401.1| (TSA: Calanus finmarchicus comp786467_c0_seq4 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 3.662e-5 Identity = 20/51 (39.22%), Postives = 30/51 (58.82%), Query Frame = 0 Query: 88 TSTI-----VQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 TSTI Q LA+ G + PC+++ P D L++WYK + G+P+YS Sbjct: 274 TSTISPLDTTQVLAVEGHQSFFPCDLTPPNPDEAVYLVLWYKEDQGEPLYS 426
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592804168|gb|GAXK01150400.1| (TSA: Calanus finmarchicus comp786467_c0_seq3 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 3.950e-5 Identity = 20/51 (39.22%), Postives = 30/51 (58.82%), Query Frame = 0 Query: 88 TSTI-----VQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 TSTI Q LA+ G + PC+++ P D L++WYK + G+P+YS Sbjct: 274 TSTISPLDTTQVLAVEGHQSFFPCDLTPPNPDEAVYLVLWYKEDQGEPLYS 426
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592804169|gb|GAXK01150399.1| (TSA: Calanus finmarchicus comp786467_c0_seq2 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 3.956e-5 Identity = 20/51 (39.22%), Postives = 30/51 (58.82%), Query Frame = 0 Query: 88 TSTI-----VQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 TSTI Q LA+ G + PC+++ P D L++WYK + G+P+YS Sbjct: 274 TSTISPLDTTQVLAVEGHQSFFPCDLTPPNPDEAVYLVLWYKEDQGEPLYS 426
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592804170|gb|GAXK01150398.1| (TSA: Calanus finmarchicus comp786467_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 4.215e-5 Identity = 20/51 (39.22%), Postives = 30/51 (58.82%), Query Frame = 0 Query: 88 TSTI-----VQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 TSTI Q LA+ G + PC+++ P D L++WYK + G+P+YS Sbjct: 274 TSTISPLDTTQVLAVEGHQSFFPCDLTPPNPDEAVYLVLWYKEDQGEPLYS 426
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592838823|gb|GAXK01118721.1| (TSA: Calanus finmarchicus comp1091110_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 5.083e-5 Identity = 17/53 (32.08%), Postives = 29/53 (54.72%), Query Frame = 0 Query: 81 IQILSKDTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 +Q + V +A+ G R LPC+++ P L++WYK + G+P+YS Sbjct: 2502 LQTTTMSALETVDQIAVSGYRAFLPCDLTPPNPSEVVYLVLWYKGDEGEPIYS 2660
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592838122|gb|GAXK01119422.1| (TSA: Calanus finmarchicus comp1645590_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 5.273e-4 Identity = 24/92 (26.09%), Postives = 44/92 (47.83%), Query Frame = 0 Query: 46 KVVLNKLTTTMNKKNFFGFLPI---KVLVMIPQNLVKAIQILSKDTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYSL 134 +++ ++ T K + G L + KVLV +NLV + T+ A+ G +G LPC + + ++WYK + G+P+Y+ Sbjct: 2353 QLLQHRYTCGRMKFDLVGLLEVFILKVLVCSSENLVPVPSSFLQSTA-----WALPGHQGYLPCEIEAESAHEQLYTVLWYKGDDGEPIYTF 2613
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592750760|gb|GAXK01203653.1| (TSA: Calanus finmarchicus comp1399060_c0_seq2 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 7.082e-4 Identity = 17/47 (36.17%), Postives = 27/47 (57.45%), Query Frame = 0 Query: 87 DTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 D +V + ++GG LPC+ S P +P L +W+K+ DP+YS Sbjct: 1473 DRDVVVPASGLIGGTVRLPCDTSPPSPHNPLLLTVWFKDHLQDPIYS 1613
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592750761|gb|GAXK01203652.1| (TSA: Calanus finmarchicus comp1399060_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 7.539e-4 Identity = 17/47 (36.17%), Postives = 27/47 (57.45%), Query Frame = 0 Query: 87 DTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYS 133 D +V + ++GG LPC+ S P +P L +W+K+ DP+YS Sbjct: 3291 DRDVVVPASGLIGGTVRLPCDTSPPSPHNPLLLTVWFKDHLQDPIYS 3431
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Match: gi|592796644|gb|GAXK01157924.1| (TSA: Calanus finmarchicus comp203065_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 7.566e-4 Identity = 16/39 (41.03%), Postives = 25/39 (64.10%), Query Frame = 0 Query: 96 AIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYSL 134 +VG +PC+++ P + P LI+WYKN G P+YS+ Sbjct: 2513 GVVGHPVSIPCDLTPPSAGDSPHLILWYKNIFGTPIYSV 2629
BLAST of EMLSAG00000009758 vs. L. salmonis peptides
Match: EMLSAP00000009758 (pep:novel supercontig:LSalAtl2s:LSalAtl2s62:811244:834609:-1 gene:EMLSAG00000009758 transcript:EMLSAT00000009758 description:"snap_masked-LSalAtl2s62-processed-gene-8.3") HSP 1 Score: 276.174 bits (705), Expect = 3.184e-96 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 Query: 1 MVCNFTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNKLTTTMNKKNFFGFLPIKVLVMIPQNLVKAIQILSKDTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYSL 134 MVCNFTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNKLTTTMNKKNFFGFLPIKVLVMIPQNLVKAIQILSKDTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYSL Sbjct: 1 MVCNFTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNKLTTTMNKKNFFGFLPIKVLVMIPQNLVKAIQILSKDTSTIVQSLAIVGGRGLLPCNVSLPGSDHPPTLIIWYKNEGGDPVYSL 134
BLAST of EMLSAG00000009758 vs. L. salmonis peptides
Match: EMLSAP00000001260 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1206:18081:19084:1 gene:EMLSAG00000001260 transcript:EMLSAT00000001260 description:"maker-LSalAtl2s1206-augustus-gene-0.17") HSP 1 Score: 57.3806 bits (137), Expect = 1.865e-11 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0 Query: 5 FTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNK 51 + V G A +NVRH RAKT I KS ELVK+ MK F TKYE V+LNK Sbjct: 128 YIVLGRAGMNVRHRRAKTGRIGKSHELVKEDAMKWFQTKYEGVILNK 174
BLAST of EMLSAG00000009758 vs. nr
Match: gi|225708904|gb|ACO10298.1| (60S ribosomal protein L11 [Caligus rogercresseyi]) HSP 1 Score: 59.6918 bits (143), Expect = 1.861e-8 Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 Query: 5 FTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNK 51 + V G A +NVRH RAKT I KS ELVKD MK F TKYE V+LNK Sbjct: 128 YVVLGRAGMNVRHRRAKTGRIGKSHELVKDDAMKWFQTKYEGVILNK 174
BLAST of EMLSAG00000009758 vs. nr
Match: gi|225712480|gb|ACO12086.1| (60S ribosomal protein L11 [Lepeophtheirus salmonis]) HSP 1 Score: 57.7658 bits (138), Expect = 1.043e-7 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0 Query: 5 FTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNK 51 + V G A +NVRH RAKT I KS ELVK+ MK F TKYE V+LNK Sbjct: 128 YIVLGRAGMNVRHRRAKTGRIGKSHELVKEDAMKWFQTKYEGVILNK 174
BLAST of EMLSAG00000009758 vs. nr
Match: gi|225711756|gb|ACO11724.1| (60S ribosomal protein L11 [Caligus rogercresseyi]) HSP 1 Score: 57.3806 bits (137), Expect = 1.397e-7 Identity = 29/47 (61.70%), Postives = 32/47 (68.09%), Query Frame = 0 Query: 5 FTVFGIANLNVRHCRAKTRCIEKSRELVKDHVMKLFPTKYEKVVLNK 51 + V G A +NVRH RAK I KS ELVKD MK F TKYE V+LNK Sbjct: 128 YVVLGRAGMNVRHRRAKIGRIGKSHELVKDDAMKWFQTKYEGVILNK 174 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009758 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009758 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000009758 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000009758 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009758 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009758 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 3
BLAST of EMLSAG00000009758 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s62:811244..834609- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009758-692524 ID=EMLSAG00000009758-692524|Name=EMLSAG00000009758|organism=Lepeophtheirus salmonis|type=gene|length=23366bp|location=Sequence derived from alignment at LSalAtl2s62:811244..834609- (Lepeophtheirus salmonis)back to top Add to Basket
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