EMLSAG00000010553, EMLSAG00000010553-693319 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000010553 vs. L. salmonis peptides
Match: EMLSAP00000010553 (pep:novel supercontig:LSalAtl2s:LSalAtl2s7003:1391:3379:1 gene:EMLSAG00000010553 transcript:EMLSAT00000010553 description:"maker-LSalAtl2s7003-snap-gene-0.2") HSP 1 Score: 379.793 bits (974), Expect = 3.905e-135 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 PTTTSTTSTTSTTSTTSTTSTTKSAPIFLKHPCPTNVEYGPPESDCTFSAGHKLYKHNLLYPLNSPYRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 PTTTSTTSTTSTTSTTSTTSTTKSAPIFLKHPCPTNVEYGPPESDCTFSAGHKLYKHNLLYPLNSPYRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP Sbjct: 1 PTTTSTTSTTSTTSTTSTTSTTKSAPIFLKHPCPTNVEYGPPESDCTFSAGHKLYKHNLLYPLNSPYRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194
BLAST of EMLSAG00000010553 vs. L. salmonis peptides
Match: EMLSAP00000010314 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6833:1:1974:1 gene:EMLSAG00000010314 transcript:EMLSAT00000010314 description:"augustus_masked-LSalAtl2s6833-processed-gene-0.1") HSP 1 Score: 189.889 bits (481), Expect = 2.007e-58 Identity = 107/150 (71.33%), Postives = 116/150 (77.33%), Query Frame = 0 Query: 67 YRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIG----------------------PTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 YRS+ P+ NSEISQKQNSVN+A G+SSPSFGSNVQSA NGLYRS TNY P P +STGINVNN+NDL+SQSNSPSYRSIG P DNSEI QKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNN+P +P Sbjct: 167 YRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNY-PGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESP 315 HSP 2 Score: 178.718 bits (452), Expect = 4.280e-54 Identity = 97/127 (76.38%), Postives = 110/127 (86.61%), Query Frame = 0 Query: 56 KHNLLYPLNSP-YRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNG 181 +++L+ NSP YRSI PIDNSEISQKQNSVN+AGGYSSPSFGSNVQSA NGLYRS+TN P +P +STG+N+NN+N LVSQSNSPSYRS GP N E+ Q QNS+NNAGGYSSPSFGSNVQSATNG Sbjct: 251 QNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQNQNSLNNAGGYSSPSFGSNVQSATNG 377 HSP 3 Score: 158.688 bits (400), Expect = 1.709e-46 Identity = 89/126 (70.63%), Postives = 102/126 (80.95%), Query Frame = 0 Query: 69 SIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 SI PI+NSEISQKQNS+N+A G SSPSFG NVQS N L+R +TN P NP +STG+N+N +N L+SQSNS YRS+ P NSEI QKQNSVNNA G+SSPSFGSNVQSATNGLYRS T N+PG P Sbjct: 94 SIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHT-NYPGTP 218 HSP 4 Score: 79.7221 bits (195), Expect = 6.105e-18 Identity = 52/113 (46.02%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 101 QSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYR-------------------SIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 Q + NG + +N + +N + G N+NN+N+ + Q NS SIGP +NSEI QKQNS+NNA G SSPSFG NVQS TN L+R QTNNFP NP Sbjct: 32 QQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENP 144
BLAST of EMLSAG00000010553 vs. L. salmonis peptides
Match: EMLSAP00000009194 (pep:novel supercontig:LSalAtl2s:LSalAtl2s583:258140:262233:-1 gene:EMLSAG00000009194 transcript:EMLSAT00000009194 description:"maker-LSalAtl2s583-snap-gene-1.41") HSP 1 Score: 116.701 bits (291), Expect = 1.721e-32 Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 0 Query: 64 NSPY-RSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQK---QNSVNNAGGYSSPSFGSNVQSATNGL 182 NSPY RS RP+ NSEI+Q QNS N+AG Y SP + V S ++G+ S+ NYSP+ +S G+N+NN+N LVSQSNSPSYRSIGP N+EI QK QNSVNNA YS+PSFGSNVQSATNGL Sbjct: 53 NSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGI--SKKNYSPM---SSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170 HSP 2 Score: 60.077 bits (144), Expect = 5.456e-12 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 0 Query: 98 SNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYR 184 SNVQSA N LYRS +N + +S+G+N+NN+N+ V++ NSP YRS P NSEI Q QNS NNAG Y SP + V S ++G+ + Sbjct: 13 SNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISK 99
BLAST of EMLSAG00000010553 vs. L. salmonis peptides
Match: EMLSAP00000004268 (pep:novel supercontig:LSalAtl2s:LSalAtl2s223:77:757:-1 gene:EMLSAG00000004268 transcript:EMLSAT00000004268 description:"maker-LSalAtl2s223-snap-gene-0.10") HSP 1 Score: 92.8189 bits (229), Expect = 5.926e-24 Identity = 62/123 (50.41%), Postives = 71/123 (57.72%), Query Frame = 0 Query: 72 PIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 P SEI+Q NS N+AG +SSPSFGSN Q+A NGLYRS TN + STG+N NSVNNA G+SSPSFGSNVQSATNGLYRSQ N++ NP Sbjct: 21 PALTSEINQNINSENNAGRFSSPSFGSNAQAATNGLYRSITNNNAGASIASTGVN-------------------------------NSVNNAEGHSSPSFGSNVQSATNGLYRSQNNDYLRNP 112 HSP 2 Score: 61.2326 bits (147), Expect = 1.261e-12 Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0 Query: 83 NSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDL 133 NSVN+A G+SSPSFGSNVQSA NGLYRS+ N NP +S+G+N+N++N L Sbjct: 76 NSVNNAEGHSSPSFGSNVQSATNGLYRSQNNDYLRNPISSSGVNLNSQNSL 126 The following BLAST results are available for this feature:
BLAST of EMLSAG00000010553 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000010553 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000010553 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000010553 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000010553 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000010553 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000010553 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s7003:1391..3379+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000010553-693319 ID=EMLSAG00000010553-693319|Name=EMLSAG00000010553|organism=Lepeophtheirus salmonis|type=gene|length=1989bp|location=Sequence derived from alignment at LSalAtl2s7003:1391..3379+ (Lepeophtheirus salmonis)back to top Add to Basket
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