EMLSAG00000010557, EMLSAG00000010557-693323 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592957199|gb|GAXK01001357.1| (TSA: Calanus finmarchicus comp660018_c0_seq1 transcribed RNA sequence) HSP 1 Score: 85.5001 bits (210), Expect = 3.535e-19 Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 0 Query: 11 VKCYLCCKQIGGYNWKNGSHRKSCSD--KNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKRCRGVTARRRNGWXD 124 V CYLC +++ WK GSHR+ C+D K+ + P +++ CPKC L+ WP PF C S CP G + +TG NRFNCF+CN+DLC C+ R G T GW + Sbjct: 278 VTCYLCKRRVTQGQWKQGSHRQKCADIHKDTLKNMMSPENNKIRCPKCRARLKLWPVNHGPPFACSS-SNCPIVGRI-KSTGQNRFNCFSCNFDLCESCVNRKLGKTVM---GWEE 610
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592769276|gb|GAXK01185292.1| (TSA: Calanus finmarchicus comp3923643_c0_seq1 transcribed RNA sequence) HSP 1 Score: 75.485 bits (184), Expect = 1.233e-16 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 0 Query: 3 CNSESGEEVKCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGG-SKCPNSGLLLPNTGDNRFNCFTCNYDLCHDC 107 C S +++ CYLC +++G W NGSHR C+ +N+ + + PC KCG +R W ++ + F C+ S C G L N+ NR+NCF C+YD+C C Sbjct: 13 CGSVWCDDIVCYLCNQEVGDRQWGNGSHRAVCAKENLTKLETFLEHPNLPCGKCGNKMRLWTDQ-GSLFVCNSSYSTCKQKGGNLDNSSGNRYNCFGCDYDICIGC 327
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795052|gb|GAXK01159516.1| (TSA: Calanus finmarchicus comp1175258_c0_seq5 transcribed RNA sequence) HSP 1 Score: 77.411 bits (189), Expect = 1.436e-16 Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKR 110 +CYLC K + WK+G HR+ C+ +N + T + C +C K LR WP K+ + F C G C + G + NTG NRFNCF CN D C C++ Sbjct: 230 QCYLCHKSVPESKWKSGEHRELCATQNAELLRGFKTIN-IKCKQCRKPLRLWP-KMGSEFYCASGYSCDSHGRGIVNTGINRFNCFQCNIDFCLPCVEE 520
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795050|gb|GAXK01159518.1| (TSA: Calanus finmarchicus comp1175258_c0_seq7 transcribed RNA sequence) HSP 1 Score: 77.0258 bits (188), Expect = 1.642e-16 Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCI-------KRCRGVTARRRNGWXDLNGGMNVCHPNGP-TDSHDDDRAKLL 149 +CYLC K + WK+G HR+ C+ +N + L T + C +C + LR WP K+ F C G C + G + NTG NRFNCF C+ D C C+ K R G GG + H T+ + D +K+L Sbjct: 53 QCYLCHKSVPESEWKSGEHRELCATQNFELLRGLKTIN-IKCKQCREPLRLWP-KMGAEFYCASGYSCDSHGRGIVNTGINRFNCFQCDIDFCLPCVEEKMDSEKDIESGDFRESFGGASWQGGKSTFHTETTYTNKEEFDWSKVL 484
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795051|gb|GAXK01159517.1| (TSA: Calanus finmarchicus comp1175258_c0_seq6 transcribed RNA sequence) HSP 1 Score: 77.0258 bits (188), Expect = 1.710e-16 Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKR 110 +CYLC K + WK+G HR+ C+ +N + T + C +C K LR WP K+ + F C G C + G + NTG NRFNCF CN D C C++ Sbjct: 230 QCYLCHKSVPESKWKSGEHRELCATQNAELLRGFKTIN-IKCKQCRKPLRLWP-KMGSEFYCASGYSCDSHGRGIVNTGINRFNCFQCNIDFCLPCVEE 520
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795049|gb|GAXK01159519.1| (TSA: Calanus finmarchicus comp1175258_c0_seq8 transcribed RNA sequence) HSP 1 Score: 77.0258 bits (188), Expect = 1.828e-16 Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCI-------KRCRGVTARRRNGWXDLNGGMNVCHPNGP-TDSHDDDRAKLL 149 +CYLC K + WK+G HR+ C+ +N + L T + C +C + LR WP K+ F C G C + G + NTG NRFNCF C+ D C C+ K R G GG + H T+ + D +K+L Sbjct: 53 QCYLCHKSVPESEWKSGEHRELCATQNFELLRGLKTIN-IKCKQCREPLRLWP-KMGAEFYCASGYSCDSHGRGIVNTGINRFNCFQCDIDFCLPCVEEKMDSEKDIESGDFRESFGGASWQGGKSTFHTETTYTNKEEFDWSKVL 484
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592920347|gb|GAXK01038028.1| (TSA: Calanus finmarchicus comp859668_c0_seq1 transcribed RNA sequence) HSP 1 Score: 76.6406 bits (187), Expect = 2.369e-16 Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 0 Query: 5 SESGEEVKCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGG-SKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKRCRGVTA 116 S E + CYLC + + +W G HRK C+ + +++ T C +C L+ WP++ F+CD S CP G + +G NR+NCF C+YDLC C+K V Sbjct: 471 SNRKEVMVCYLCLEDVRLEDWNAGHHRKQCARRCTAQLSTFQTHSSIRCAQCKDKLKIWPDQ-GPAFQCDSQLSSCPTMGQEIGASGGNRYNCFLCDYDLCKACVKTMESVEV 806
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795054|gb|GAXK01159514.1| (TSA: Calanus finmarchicus comp1175258_c0_seq3 transcribed RNA sequence) HSP 1 Score: 75.8702 bits (185), Expect = 6.845e-16 Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKR 110 +CYLC K + WK+G HR+ C+ +N + L T + C +C + LR WP K+ F C G C + G + NTG NRFNCF C+ D C C++ Sbjct: 348 QCYLCHKSVPESEWKSGEHRELCATQNFELLRGLKTIN-IKCKQCREPLRLWP-KMGAEFYCASGYSCDSHGRGIVNTGINRFNCFQCDIDFCLPCVEE 638
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795056|gb|GAXK01159512.1| (TSA: Calanus finmarchicus comp1175258_c0_seq1 transcribed RNA sequence) HSP 1 Score: 75.8702 bits (185), Expect = 7.604e-16 Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKR 110 +CYLC K + WK+G HR+ C+ +N + L T + C +C + LR WP K+ F C G C + G + NTG NRFNCF C+ D C C++ Sbjct: 376 QCYLCHKSVPESEWKSGEHRELCATQNFELLRGLKTIN-IKCKQCREPLRLWP-KMGAEFYCASGYSCDSHGRGIVNTGINRFNCFQCDIDFCLPCVEE 666
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Match: gi|592795053|gb|GAXK01159515.1| (TSA: Calanus finmarchicus comp1175258_c0_seq4 transcribed RNA sequence) HSP 1 Score: 75.485 bits (184), Expect = 9.091e-16 Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 12 KCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKR 110 +CYLC K + WK+G HR+ C+ +N + L T + C +C + LR WP K+ F C G C + G + NTG NRFNCF C+ D C C++ Sbjct: 348 QCYLCHKSVPESEWKSGEHRELCATQNFELLRGLKTIN-IKCKQCREPLRLWP-KMGAEFYCASGYSCDSHGRGIVNTGINRFNCFQCDIDFCLPCVEE 638
BLAST of EMLSAG00000010557 vs. L. salmonis peptides
Match: EMLSAP00000010557 (pep:novel supercontig:LSalAtl2s:LSalAtl2s700:194951:200781:1 gene:EMLSAG00000010557 transcript:EMLSAT00000010557 description:"snap_masked-LSalAtl2s700-processed-gene-1.19") HSP 1 Score: 348.206 bits (892), Expect = 1.808e-123 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 Query: 1 MCCNSESGEEVKCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKRCRGVTARRRNGWXDLNGGMNVCHPNGPTDSHDDDRAKLLGGGRPRSLYLKAKLGPITQKIYA 172 MCCNSESGEEVKCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKRCRGVTARRRNGWXDLNGGMNVCHPNGPTDSHDDDRAKLLGGGRPRSLYLKAKLGPITQKIYA Sbjct: 1 MCCNSESGEEVKCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKRCRGVTARRRNGWXDLNGGMNVCHPNGPTDSHDDDRAKLLGGGRPRSLYLKAKLGPITQKIYA 172
BLAST of EMLSAG00000010557 vs. L. salmonis peptides
Match: EMLSAP00000012226 (pep:novel supercontig:LSalAtl2s:LSalAtl2s88:488619:489085:-1 gene:EMLSAG00000012226 transcript:EMLSAT00000012226 description:"maker-LSalAtl2s88-augustus-gene-4.4") HSP 1 Score: 48.521 bits (114), Expect = 4.038e-8 Identity = 30/81 (37.04%), Postives = 36/81 (44.44%), Query Frame = 0 Query: 30 HRKSCSDKNVIFINSLPTSDRAPCPKCGKXLRQWPEKLVTPFKCDGGSKCPNSGLLLPNTGDNRFNCFTCNYDLCHDCIKR 110 HR +C N L + PC C K LR W PF C S C + NTG NR+ CF C+YDLC C + Sbjct: 38 HRLTCILNNYTIYCKLRQTP-VPCYICRKKLRLWDLYEEFPFTCKRRS-CSGFEKPMANTGYNRYTCFACDYDLCFTCYSK 116
BLAST of EMLSAG00000010557 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold68_size422247-snap-gene-1.15 (protein:Tk11390 transcript:maker-scaffold68_size422247-snap-gene-1.15-mRNA-1 annotation:"hypothetical protein L798_02492 partial") HSP 1 Score: 88.1965 bits (217), Expect = 3.952e-21 Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = 0 Query: 11 VKCYLCCKQIGGYNWKNGSHRKSCSDKNVIFINSLPTS-DRAPCPKCGKXLRQWPEKLVTP-FKCDGGSKC---PNSGLL---LPNTGDNRFNCFTCNYDLCHDCI 108 V CYLC +QI W +G HR C++++ F++ LP + CP C L+ WP++L P F C KC N G+ + N GDNR+NCF C++DLC DCI Sbjct: 130 VTCYLCEQQIPRRYWLSGEHRIECANEHERFLDKLPAPFPSSRCPICYHPLKLWPKQLGPPEFMCSSNKKCTEMANDGVTKKSMDNAGDNRYNCFNCDFDLCIDCI 235 The following BLAST results are available for this feature:
BLAST of EMLSAG00000010557 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000010557 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000010557 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000010557 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000010557 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000010557 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000010557 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s700:194951..200781+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000010557-693323 ID=EMLSAG00000010557-693323|Name=EMLSAG00000010557|organism=Lepeophtheirus salmonis|type=gene|length=5831bp|location=Sequence derived from alignment at LSalAtl2s700:194951..200781+ (Lepeophtheirus salmonis)back to top Add to Basket
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