EMLSAG00000011279, EMLSAG00000011279-694045 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000011279
Unique NameEMLSAG00000011279-694045
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592916674|gb|GAXK01041701.1| (TSA: Calanus finmarchicus comp1058983_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 9.509e-1
Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 0 
Query:   31 TCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGN 68
            +C RD F+   PE +FQ S       PCL+ N EC G+
Sbjct:  294 SCARD-FKLGGPELHFQISALLFQLYPCLNRNHECHGH 404
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592916676|gb|GAXK01041699.1| (TSA: Calanus finmarchicus comp1058983_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.013e+0
Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 0 
Query:   31 TCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGN 68
            +C RD F+   PE +FQ S       PCL+ N EC G+
Sbjct:  327 SCARD-FKLGGPELHFQISALLFQLYPCLNRNHECHGH 437
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592932172|gb|GAXK01026381.1| (TSA: Calanus finmarchicus comp19860_c0_seq19 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.537e+0
Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   16 GVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQC 48
            G  G F  + KNT   CT  EF C    YY+QC
Sbjct:  837 GTSGSFRTL-KNTFRQCTPTEFICNIHSYYYQC 932
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592932174|gb|GAXK01026379.1| (TSA: Calanus finmarchicus comp19860_c0_seq17 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.539e+0
Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   16 GVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQC 48
            G  G F  + KNT   CT  EF C    YY+QC
Sbjct:  837 GTSGSFRTL-KNTFRQCTPTEFICNIHSYYYQC 932
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592932177|gb|GAXK01026376.1| (TSA: Calanus finmarchicus comp19860_c0_seq14 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.547e+0
Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   16 GVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQC 48
            G  G F  + KNT   CT  EF C    YY+QC
Sbjct:  837 GTSGSFRTL-KNTFRQCTPTEFICNIHSYYYQC 932
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592932180|gb|GAXK01026373.1| (TSA: Calanus finmarchicus comp19860_c0_seq11 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.885e+0
Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   16 GVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQC 48
            G  G F  + KNT   CT  EF C    YY+QC
Sbjct:  819 GTSGSFRTL-KNTFRQCTPTEFICNIHSYYYQC 914
[Close]
BLAST of EMLSAG00000011279 vs. C. finmarchicus
Match: gi|592932182|gb|GAXK01026371.1| (TSA: Calanus finmarchicus comp19860_c0_seq9 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 1.886e+0
Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   16 GVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQC 48
            G  G F  + KNT   CT  EF C    YY+QC
Sbjct:  819 GTSGSFRTL-KNTFRQCTPTEFICNIHSYYYQC 914
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000011279 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:382917:383509:-1 gene:EMLSAG00000011279 transcript:EMLSAT00000011279 description:"maker-LSalAtl2s772-augustus-gene-3.35")

HSP 1 Score: 252.292 bits (643), Expect = 3.096e-87
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGKFS 124
            MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGKFS
Sbjct:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGKFS 124
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000011280 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:397975:398789:-1 gene:EMLSAG00000011280 transcript:EMLSAT00000011280 description:"maker-LSalAtl2s772-augustus-gene-3.36")

HSP 1 Score: 244.973 bits (624), Expect = 1.152e-83
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0 
Query:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGKFS 124
            MKAIIQISILSTLILGVFGGFDNICKNTM TCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCA+TCGK S
Sbjct:    1 MKAIIQISILSTLILGVFGGFDNICKNTMTTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAKTCGKCS 124
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000006101 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3321:782:1958:1 gene:EMLSAG00000006101 transcript:EMLSAT00000006101 description:"maker-LSalAtl2s3321-augustus-gene-0.1")

HSP 1 Score: 147.902 bits (372), Expect = 8.337e-46
Identity = 75/124 (60.48%), Postives = 86/124 (69.35%), Query Frame = 0 
Query:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGKFS 124
            MK IIQISILS LILGVFGGF+N+                 P YYFQCS+ACGC   CLDP+A+CL  S ICL    R  CPR CG CEGCNNLVH+DIC+ N +RCN YNV+YLCA+TCG+ S
Sbjct:    1 MKVIIQISILSALILGVFGGFENV---------------WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCS 109
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000008527 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5266:2605:5358:1 gene:EMLSAG00000008527 transcript:EMLSAT00000008527 description:"maker-LSalAtl2s5266-augustus-gene-0.1")

HSP 1 Score: 138.658 bits (348), Expect = 2.216e-42
Identity = 69/103 (66.99%), Postives = 75/103 (72.82%), Query Frame = 0 
Query:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGC--NNLVHDDICE 101
            MK I QISI+S LILGVFGGF+N+CKNTMPTC RDE RC+DP YYFQCSKACGC G CLDPN  CL  S IC+    R  CPR CGVCE    N L  DD C+
Sbjct:   28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCEESCRNKLASDDACD 130
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000004726 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2490:10289:10675:1 gene:EMLSAG00000004726 transcript:EMLSAT00000004726 description:"maker-LSalAtl2s2490-augustus-gene-0.1")

HSP 1 Score: 104.375 bits (259), Expect = 1.130e-29
Identity = 49/66 (74.24%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECL 66
            MK  IQISI   L LGVF  F+N+CK+TM  CTRDE RCMDPEYYFQCSKACGC G CLDPNA CL
Sbjct:    1 MKTFIQISIFCGLFLGVFRRFENVCKDTMTNCTRDEVRCMDPEYYFQCSKACGCTGSCLDPNAWCL 66
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000004640 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:15271:17023:1 gene:EMLSAG00000004640 transcript:EMLSAT00000004640 description:"maker-LSalAtl2s2425-augustus-gene-0.2")

HSP 1 Score: 91.6633 bits (226), Expect = 6.737e-24
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 0 
Query:    7 ISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETC 120
            + I+S  ++  +G  D +C++ M +C  + ++CM+PEYYF+C K+CGC+  C D + +C+ N   CL+   R  C R CG C+GC +L+   +C      C+  NV+Y C  TC
Sbjct:    6 LIIISFFLVVAYGQGDRMCRDEMESCETNAYKCMNPEYYFKCKKSCGCESACTDKSIKCIQNPNKCLDRDQRFECQRVCGNCDGCEDLLEHLMCNELKNLCHNENVRYFCPATC 119
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000002982 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:193433:195225:1 gene:EMLSAG00000002982 transcript:EMLSAT00000002982 description:"maker-LSalAtl2s170-augustus-gene-2.7")

HSP 1 Score: 81.2629 bits (199), Expect = 2.963e-20
Identity = 45/122 (36.89%), Postives = 56/122 (45.90%), Query Frame = 0 
Query:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGK 122
            M  + ++ ILS + +G  GGFD  C +    C  D   CM P YYFQCS+ CG                                  C GCN+LV   IC +N +RCN YNV YLC+ TCGK
Sbjct:    1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCG----------------------------------CTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGK 88
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000012207 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:37024:45519:-1 gene:EMLSAG00000012207 transcript:EMLSAT00000012207 description:"maker-LSalAtl2s884-augustus-gene-1.11")

HSP 1 Score: 80.4925 bits (197), Expect = 6.310e-20
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:   23 NICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGK 122
            N C++ +  C  D   C+ P YYF+C + CGCKG C D ++ C      CL+  N N C R CG+C+GC NL+ D++C+   Y C+  NVKY CA TC K
Sbjct:    2 NYCRDEVHNCEADATSCIKPAYYFKCRRTCGCKGNCQDGDSACFKIPDRCLS-TNGN-CYRFCGLCDGCENLIKDELCKELRYLCHVENVKYFCAGTCNK 99
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000007109 (pep:novel supercontig:LSalAtl2s:LSalAtl2s400:180525:182688:-1 gene:EMLSAG00000007109 transcript:EMLSAT00000007109 description:"maker-LSalAtl2s400-augustus-gene-1.7")

HSP 1 Score: 81.2629 bits (199), Expect = 7.546e-20
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 0 
Query:    5 IQISILSTLILGVFGGFDNI-CKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETC 120
            I++ I+ +  L V  G  NI C++    C  D ++CM+PEYYF+C + CGC+  C D +  C+     CLN   R  C R+CG C+ C +L+++ +C      C+  NV+Y C  TC
Sbjct:   27 IRLFIIISFFLVVVNGQGNIICRDEQKICKPDAYKCMNPEYYFKCKETCGCESRCTDKSIGCIQFPNRCLNQNQRVDCQRACGNCDRCEDLLNNLMCNELKNLCHNGNVRYFCPATC 143
[Close]
BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Match: EMLSAP00000002978 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:166204:168625:1 gene:EMLSAG00000002978 transcript:EMLSAT00000002978 description:"maker-LSalAtl2s170-snap-gene-1.20")

HSP 1 Score: 70.8626 bits (172), Expect = 2.964e-16
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 0 
Query:    5 IQISILSTLILGVFGGFDN---ICKNTMPTCTRDEFRCMDPEYYFQCSKACGCK--GPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGK 122
            ++I +   L+LG    +D+    C +    CT DE+ C+ P+YY  C ++CGCK  G C D   +C+  +  C N+               C+NL+ D+ CE N   CN  ++ YLCA TCG+
Sbjct:    7 LRIVLFCALVLGTTSAYDHEDPYCLDKEDYCTADEWNCLHPQYYHVCRRSCGCKRRGQCYDLFGDCVDFTNDCFNE-------------RRCDNLIRDEYCENNRNLCNHPSILYLCARTCGR 116
[Close]
BLAST of EMLSAG00000011279 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 90.1225 bits (222), Expect = 2.182e-20
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 0 
Query:    7 ISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETC 120
            + I+S  ++ V G  ++ C+N M +C  + F+CM+PEYYF+C K+CGC+  C D + +C+ N   CL+   R  C R+CG C+ C +L+   +C      CN  NV+Y C  TC
Sbjct:    6 LIIISFFLVVVNGQGNSTCENEMESCETNTFKCMNPEYYFKCKKSCGCESACTDTSIKCINNPNKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATC 119
[Close]
BLAST of EMLSAG00000011279 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 59.6918 bits (143), Expect = 1.161e-8
Identity = 38/121 (31.40%), Postives = 56/121 (46.28%), Query Frame = 0 
Query:    8 SILSTLILGVFGGFDNICKNTM------PTCTRDEFRCMDPEYYFQCSKACG-CKGPCLDPNAECLGNSLICLNDPN-RNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETC 120
            S+   LI   F G + +  NT+        C   + +C  P   + C + CG CK  C D NA C      C  + N  N CP++C  C+ C +L+   ICE     C   N+KY+C ++C
Sbjct:    3 SLYLVLIACFFQGINGLISNTLCVDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAEDNMKYVCRKSC 123
The following BLAST results are available for this feature:
BLAST of EMLSAG00000011279 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000011279 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 7
Match NameE-valueIdentityDescription
gi|592916674|gb|GAXK01041701.1|9.509e-142.11TSA: Calanus finmarchicus comp1058983_c0_seq4 tran... [more]
gi|592916676|gb|GAXK01041699.1|1.013e+042.11TSA: Calanus finmarchicus comp1058983_c0_seq2 tran... [more]
gi|592932172|gb|GAXK01026381.1|1.537e+045.45TSA: Calanus finmarchicus comp19860_c0_seq19 trans... [more]
gi|592932174|gb|GAXK01026379.1|1.539e+045.45TSA: Calanus finmarchicus comp19860_c0_seq17 trans... [more]
gi|592932177|gb|GAXK01026376.1|1.547e+045.45TSA: Calanus finmarchicus comp19860_c0_seq14 trans... [more]
gi|592932180|gb|GAXK01026373.1|1.885e+045.45TSA: Calanus finmarchicus comp19860_c0_seq11 trans... [more]
gi|592932182|gb|GAXK01026371.1|1.886e+045.45TSA: Calanus finmarchicus comp19860_c0_seq9 transc... [more]
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BLAST of EMLSAG00000011279 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 20
Match NameE-valueIdentityDescription
EMLSAP000000112793.096e-87100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s772:38291... [more]
EMLSAP000000112801.152e-8397.58pep:novel supercontig:LSalAtl2s:LSalAtl2s772:39797... [more]
EMLSAP000000061018.337e-4660.48pep:novel supercontig:LSalAtl2s:LSalAtl2s3321:782:... [more]
EMLSAP000000085272.216e-4266.99pep:novel supercontig:LSalAtl2s:LSalAtl2s5266:2605... [more]
EMLSAP000000047261.130e-2974.24pep:novel supercontig:LSalAtl2s:LSalAtl2s2490:1028... [more]
EMLSAP000000046406.737e-2436.84pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:1527... [more]
EMLSAP000000029822.963e-2036.89pep:novel supercontig:LSalAtl2s:LSalAtl2s170:19343... [more]
EMLSAP000000122076.310e-2044.00pep:novel supercontig:LSalAtl2s:LSalAtl2s884:37024... [more]
EMLSAP000000071097.546e-2036.75pep:novel supercontig:LSalAtl2s:LSalAtl2s400:18052... [more]
EMLSAP000000029782.964e-1633.33pep:novel supercontig:LSalAtl2s:LSalAtl2s170:16620... [more]

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BLAST of EMLSAG00000011279 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000011279 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000011279 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|290462093|gb|ADD24094.1|2.182e-2038.60protein ZK643.6 [Lepeophtheirus salmonis][more]
gi|225712722|gb|ACO12207.1|1.161e-831.40ZK643.6 precursor [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000011279 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s772supercontigLSalAtl2s772:382917..383509 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s772-augustus-gene-3.35
Biotypeprotein_coding
EvidenceIEA
Noteprotein ZK643.6 [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000011279 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000011279EMLSAT00000011279-707126Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s772:382917..383509-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000011279-694045 ID=EMLSAG00000011279-694045|Name=EMLSAG00000011279|organism=Lepeophtheirus salmonis|type=gene|length=593bp|location=Sequence derived from alignment at LSalAtl2s772:382917..383509- (Lepeophtheirus salmonis)
ATGAAGGCAATTATTCAAATTTCCATTCTCTCTACCTTAATCCTTGGAGT
ATTTGGAGGATTTGACAGTAAGTATAAGACATTGGAAAACCTTGGATTTA
ATGTCTCCTAAATTATTTATATCATCAAAATAGATATATGYAAAAACACC
ATGCCCACTTGTACAAGGGATGAATTTAGATGTATGGACCCAGAGTATTA
CTTTCAATGTTCAAAAGCATGTGGATGTAAAGGTAAATCAATTCAACCTT
TTCTTTTTTGGTCAAATTTAAACATCTAACTTTTTTTATTTAGGTCCTTG
TCTTGATCCAAATGCTGAATGTCTTGGTAACTCACTTATTTGTTTAAATG
ACCCTAATAGAAATGCTTGTCCAAGATCTTGTGGTGTTTGTGAAGGTAAA
AAAAGAAATTATACAATAAATGTCCCTATATATATTAACTCATGCATTTC
ATAAATTACTNCTGCTGATTATTTATCTCCTAAATCCAGGTTGTAACAAC
TTGGTTCATGACGATATATGTGAAATCAATGCATATAGGTGTAATGCTTA
CAATGTAAAGTATTTGTGTGCCGAAACTTGTGGAAAATTTTCG
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