EMLSAG00000011795, EMLSAG00000011795-694561 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000011795 vs. L. salmonis peptides
Match: EMLSAP00000011795 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8246:3:495:-1 gene:EMLSAG00000011795 transcript:EMLSAT00000011795 description:"maker-LSalAtl2s8246-augustus-gene-0.2") HSP 1 Score: 258.84 bits (660), Expect = 3.846e-89 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 Query: 1 MESQQRGVLILLVFSITCLQIGTSKSMNNRFPWMMNLDEEFVKEVKTIQNSLKVIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTTAPTEATKIPKPDTTATTEGTKXPKPTTDAPTEXTXTPXPDTXPPTEGTXTPEPDT 145 MESQQRGVLILLVFSITCLQIGTSKSMNNRFPWMMNLDEEFVKEVKTIQNSLKVIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTTAPTEATKIPKPDTTATTEGTKXPKPTTDAPTEXTXTPXPDTXPPTEGTXTPEPDT Sbjct: 1 MESQQRGVLILLVFSITCLQIGTSKSMNNRFPWMMNLDEEFVKEVKTIQNSLKVIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTTAPTEATKIPKPDTTATTEGTKXPKPTTDAPTEXTXTPXPDTXPPTEGTXTPEPDT 145
BLAST of EMLSAG00000011795 vs. L. salmonis peptides
Match: EMLSAP00000007418 (pep:novel supercontig:LSalAtl2s:LSalAtl2s421:428848:431105:-1 gene:EMLSAG00000007418 transcript:EMLSAT00000007418 description:"maker-LSalAtl2s421-augustus-gene-3.116") HSP 1 Score: 137.117 bits (344), Expect = 1.163e-40 Identity = 77/136 (56.62%), Postives = 87/136 (63.97%), Query Frame = 0 Query: 1 MESQQRGVLILLVFSITCLQIGTSKSMNNRFPWMMNLDEEFVKEVKTIQNSLKVIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTTAPTEATKIPKPDTTATTEGTKXPKPTTDAPTEXTXTPXPDTXPPTE 136 MESQ++GVLILL+ SITCLQ GTSKSMNNRFPWM NLDE+FVKEVK IQN+LK+IETNINN KP T APTE T PKP T + TEGT P PT APT+ T PD+ +E Sbjct: 1 MESQKKGVLILLIVSITCLQTGTSKSMNNRFPWMKNLDEDFVKEVKNIQNNLKIIETNINN-KPD-----------------------TAAPTEGTXTPKPXTESPTEGTTTPNPTMAAPTDQTDFDIPDSINNSE 112
BLAST of EMLSAG00000011795 vs. L. salmonis peptides
Match: EMLSAP00000000962 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1169:118806:119443:1 gene:EMLSAG00000000962 transcript:EMLSAT00000000962 description:"maker-LSalAtl2s1169-augustus-gene-1.10") HSP 1 Score: 127.872 bits (320), Expect = 3.027e-38 Identity = 90/110 (81.82%), Postives = 96/110 (87.27%), Query Frame = 0 Query: 1 MESQQRGVLILLVFSITCLQIGTSKSMNNRFPWMMNLDEEFVKEVKTIQNSLKVIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTTA-PTEATKIPKPDTTATTEG 109 MESQ++ VLILL+FSITCLQIGTSKSMNNRFPW NLDEEFV EVK I+NSL+VIETNINNSKP PTXP AVPTTPTPTTSKPTTPKP TA PTE T PKPDT + TEG Sbjct: 1 MESQKKRVLILLIFSITCLQIGTSKSMNNRFPWTKNLDEEFVNEVKNIRNSLRVIETNINNSKPDPTXPTAVPTTPTPTTSKPTTPKPDTAPPTEGTTTPKPDTESPTEG 110
BLAST of EMLSAG00000011795 vs. nr
Match: gi|185135318|ref|NP_001117060.1| (zonadhesin-like precursor [Salmo salar] >gi|55537656|gb|AAV52889.1| zonadhesin-like [Salmo salar] >gi|55537659|gb|AAV52890.1| zonadhesin-like [Salmo salar]) HSP 1 Score: 58.5362 bits (140), Expect = 2.660e-7 Identity = 37/98 (37.76%), Postives = 46/98 (46.94%), Query Frame = 0 Query: 54 VIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTT---APTEATKIPKPDTTATTEGTKXPKPTTDAP--TEXTXTPXPDT---XPPTEGTXTPEP 143 +I+ KP P + TP P T +P T +PTT APT +T KP TTA + T +P T AP TE P P T PP T P+P Sbjct: 1057 LIKPTTPTEKPFPADKSTIAPTPAPITMRPVTLRPTTAAPAPTNSTMTSKPSTTARPQPTTTMRPETPAPPTTEIPSPPRPTTERPQPPRPTTARPQP 1154
BLAST of EMLSAG00000011795 vs. nr
Match: gi|929238197|ref|XP_013994963.1| (PREDICTED: zonadhesin-like isoform X1 [Salmo salar]) HSP 1 Score: 58.5362 bits (140), Expect = 2.686e-7 Identity = 37/98 (37.76%), Postives = 46/98 (46.94%), Query Frame = 0 Query: 54 VIETNINNSKPHPTXPXAVPTTPTPTTSKPTTPKPTT---APTEATKIPKPDTTATTEGTKXPKPTTDAP--TEXTXTPXPDT---XPPTEGTXTPEP 143 +I+ KP P + TP P T +P T +PTT APT +T KP TTA + T +P T AP TE P P T PP T P+P Sbjct: 1057 LIKPTTPTEKPFPADKSTIAPTPAPITMRPVTLRPTTAAPAPTNSTMTSKPSTTARPQPTTTMRPETPAPPTTEIPSPPRPTTERPQPPRPTTARPQP 1154 The following BLAST results are available for this feature:
BLAST of EMLSAG00000011795 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000011795 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000011795 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000011795 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000011795 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000011795 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000011795 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s8246:3..495- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000011795-694561 ID=EMLSAG00000011795-694561|Name=EMLSAG00000011795|organism=Lepeophtheirus salmonis|type=gene|length=493bp|location=Sequence derived from alignment at LSalAtl2s8246:3..495- (Lepeophtheirus salmonis)back to top Add to Basket
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