EMLSAG00000012084, EMLSAG00000012084-694850 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000012084
Unique NameEMLSAG00000012084-694850
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592926123|gb|GAXK01032308.1| (TSA: Calanus finmarchicus comp21077_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 62.003 bits (149), Expect = 4.794e-11
Identity = 35/95 (36.84%), Postives = 49/95 (51.58%), Query Frame = 0 
Query:   83 YRFKRSLDE----YETILLSAAQNDASDCAKRLVCEVNGTPLE--NFSKEETMIARLFNP-DHLDITKITVEFDLAAQIGKRVGIEQCAVLYERC 170
            +R KR +DE             + D   C K+L+CE+        + S +E +IA  F     +D++ ITVEFDLAAQIG  +G  +C  LY RC
Sbjct:  180 HRMKRDIDENGFNMNDWYRDMTEMDQDSCGKKLICELRSKEASGVSMSADEKLIAEKFGSGKQVDVSDITVEFDLAAQIGLNMGEARCGQLYNRC 464
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592858052|gb|GAXK01099510.1| (TSA: Calanus finmarchicus comp446632_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 62.003 bits (149), Expect = 5.351e-11
Identity = 30/83 (36.14%), Postives = 52/83 (62.65%), Query Frame = 0 
Query:  103 DASDCAKRLVCEVNG--TPLENFSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFN 182
            D  DC+KRLVCE+N   +  +  S+ E ++A  F N   LD+ K ++EFD+AA +G+ VG+ +C + Y RC    ++++ + +
Sbjct:  437 DQDDCSKRLVCELNAMRSNGQVLSQHEEVLANAFGNSGELDVGKNSLEFDIAAVLGREVGMRRCELSYRRCETPVQQMLRMID 685
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BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592835767|gb|GAXK01121777.1| (TSA: Calanus finmarchicus comp107205_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 62.003 bits (149), Expect = 5.633e-11
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:  103 DASDCAKRLVCEVNG--TPLENFSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERC 170
            D  DC+KRLVCE+N   +  +  S+ E ++A  F N   LDI K ++EFD+AA +G+ VG  +C + Y RC
Sbjct:  109 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRC 321
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592835768|gb|GAXK01121776.1| (TSA: Calanus finmarchicus comp107205_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 7.902e-11
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:  103 DASDCAKRLVCEVNG--TPLENFSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERC 170
            D  DC+KRLVCE+N   +  +  S+ E ++A  F N   LDI K ++EFD+AA +G+ VG  +C + Y RC
Sbjct:  180 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRC 392
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592830700|gb|GAXK01126844.1| (TSA: Calanus finmarchicus comp47414_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 58.9214 bits (141), Expect = 1.036e-10
Identity = 30/83 (36.14%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  103 DASDCAKRLVCEVNGTPLEN--FSKEETMIARLFNPDH-LDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFN 182
            D  DC+KRL+CE+N   +E    ++ E +IA  F  ++ +DI   T+EFDLAA +GK+ G  +C + + RC     +++++ N
Sbjct:   16 DQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKMIN 264
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592830701|gb|GAXK01126843.1| (TSA: Calanus finmarchicus comp47414_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 2.034e-10
Identity = 30/83 (36.14%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  103 DASDCAKRLVCEVNGTPLEN--FSKEETMIARLFNPDH-LDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFN 182
            D  DC+KRL+CE+N   +E    ++ E +IA  F  ++ +DI   T+EFDLAA +GK+ G  +C + + RC     +++++ N
Sbjct:   16 DQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKMIN 264
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592830702|gb|GAXK01126842.1| (TSA: Calanus finmarchicus comp47414_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 58.5362 bits (140), Expect = 1.115e-9
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0 
Query:  103 DASDCAKRLVCEVNGTPLE--NFSKEETMIARLFNPDH-LDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFN 182
            D  DC+KRL+CE+N    E  + ++ E +IA  F  ++ +DI   T+EFDLAA +GK  G+ +C + Y RC      ++ + N
Sbjct:  246 DQDDCSKRLLCELNARKAEGQDLTENEQIIADSFGKNNNIDIGVETLEFDLAAVLGKEGGLRRCELSYRRCETTVPDMVTMIN 494
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592935479|gb|GAXK01023074.1| (TSA: Calanus finmarchicus comp114460_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 48.9062 bits (115), Expect = 2.240e-6
Identity = 26/85 (30.59%), Postives = 45/85 (52.94%), Query Frame = 0 
Query:   91 EYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKIT---VEFDLAAQIGKRV-GIEQCAVLYERCP 171
            ++E +    +  D +DCAKR VCE++ TP ++ S ++     +F   H+  +K T    E+D+A   G      E C  +Y++CP
Sbjct:  575 DFEHVFQKISAMDVNDCAKRYVCEISATPRDHLSAQDISTLSMFG-QHVLKSKTTSAKYEYDMAWARGNTAENAETCKNVYKKCP 826
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592833102|gb|GAXK01124442.1| (TSA: Calanus finmarchicus comp24536_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 3.847e-6
Identity = 35/113 (30.97%), Postives = 55/113 (48.67%), Query Frame = 0 
Query:   79 GFQNYRFKRSLDEYETILLSA---------AQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNP-DHLDITKITVEFDLAAQIGKRVGIEQ-CAVLYERCPHDKKKLMEI 180
                 R KRS+DE    + SA         A++D +DC K LVCE+      +  ++E  I  LF+  +H+D +    E+ LAA +G     E  C   Y +CP   +++M+I
Sbjct:  259 ALSRSRGKRSVDEDAEKVSSAQFNDFFDVIAKSDVADCGKLLVCELMSRV--DLDQDEKRIVNLFDDLEHIDPSSGRSEYQLAAYLGSLNQTEAICVRRYSKCPMSTEEVMDI 591
[Close]
BLAST of EMLSAG00000012084 vs. C. finmarchicus
Match: gi|592835758|gb|GAXK01121786.1| (TSA: Calanus finmarchicus comp107205_c5_seq7 transcribed RNA sequence)

HSP 1 Score: 44.2838 bits (103), Expect = 3.136e-5
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0 
Query:  123 FSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERC 170
             S+ E ++A  F N   LDI K ++EFD+AA +G+ VG ++C + Y RC
Sbjct:    5 LSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGAKRCELSYRRC 151
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000012084 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1 gene:EMLSAG00000012084 transcript:EMLSAT00000012084 description:"augustus_masked-LSalAtl2s864-processed-gene-0.1")

HSP 1 Score: 394.43 bits (1012), Expect = 3.773e-141
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 
Query:    1 MRAIILFGALMASCIVLSEATLILPALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQDV 190
            MRAIILFGALMASCIVLSEATLILPALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQDV
Sbjct:    1 MRAIILFGALMASCIVLSEATLILPALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQDV 190
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000007339 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gene:EMLSAG00000007339 transcript:EMLSAT00000007339 description:"snap_masked-LSalAtl2s414-processed-gene-0.6")

HSP 1 Score: 207.608 bits (527), Expect = 2.914e-67
Identity = 107/192 (55.73%), Postives = 138/192 (71.88%), Query Frame = 0 
Query:    1 MRAIILFGALMASCIVLSEATLILPALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQ---NYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQD 189
            M+   L  A MA+C+ LS+ATLILPAL +G GAL GLA++K AA K G +G LI+ G  R   R           R         Y  KRS+D++E++LLSA+Q+DASDCAK+LVCEV+G  LE+ + EETMIARLFNPDHLD+TK TVEFDLAAQIGK VGI+QC+++Y+RCPH ++KL++IF DP  G +
Sbjct:   26 MKGTHLTLAFMATCLSLSQATLILPALTIGGGALAGLAILKVAAIKGGIIGALIAXGXGRGGRRGGRRGGGRGGRRGGRRGGSLRYFGKRSIDDFESVLLSASQHDASDCAKKLVCEVSGLTLEDINSEETMIARLFNPDHLDVTKATVEFDLAAQIGKHVGIQQCSIIYQRCPHSRRKLIDIFRDPRLGNE 217
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000012085 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1 gene:EMLSAG00000012085 transcript:EMLSAT00000012085 description:"maker-LSalAtl2s864-augustus-gene-0.15")

HSP 1 Score: 191.815 bits (486), Expect = 1.349e-61
Identity = 109/189 (57.67%), Postives = 140/189 (74.07%), Query Frame = 0 
Query:    1 MRAIILFGALMASCIVLSEATLILPALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQD 189
            MR   L  A MA C  L++ATLILPA+ +G GAL GLAL+K  A K G +G LI+RG  R   R   ++++G             KRS+DE+E++LLSA+Q+DASDCAK+LVCEV+G  LE+ + EETMIARLFNPDHLD+TK TVEFDLAAQIGKRVGI+QC+V+YERCPH +++L++IF DP  G +
Sbjct:    1 MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRNRHYG-------------KRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNE 176
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000012083 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1 gene:EMLSAG00000012083 transcript:EMLSAT00000012083 description:"maker-LSalAtl2s864-augustus-gene-0.14")

HSP 1 Score: 145.591 bits (366), Expect = 1.999e-43
Identity = 96/193 (49.74%), Postives = 118/193 (61.14%), Query Frame = 0 
Query:    1 MRAIILFGALMASCIVLSEATLILP-------ALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTF 186
            M   IL GA++ASC++LSEAT+ +         L++G GAL GLAL+K AA K    G +I RG                            KRS  + E++LLSA+Q D SDCAK+LVCEVNG        E  MIA LFN D LD++K TVEFDLAAQIGKRVG EQCAV+YERCPH+++KLM+IF DP  
Sbjct:   21 MNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRG----------------------------KRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNL 185
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000007336 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 gene:EMLSAG00000007336 transcript:EMLSAT00000007336 description:"maker-LSalAtl2s414-augustus-gene-0.14")

HSP 1 Score: 133.265 bits (334), Expect = 5.937e-37
Identity = 59/100 (59.00%), Postives = 80/100 (80.00%), Query Frame = 0 
Query:   83 YRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFN 182
            +R KR+++EYE ILLS++Q D +DC KRLVCE++  P    S EE  IA +FN ++LDI+K TVEF+LAAQIGKRVG+EQC V+Y+RCP+ + KLMEI++
Sbjct:  292 FRGKRAINEYEEILLSSSQEDQNDCTKRLVCEISSLPPTAMSPEEIQIASVFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPYPRAKLMEIYS 391

HSP 2 Score: 132.494 bits (332), Expect = 1.089e-36
Identity = 61/98 (62.24%), Postives = 78/98 (79.59%), Query Frame = 0 
Query:   83 YRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEI 180
            +R KR+++EYE ILLSA+Q D +DCAKRLVCE++  P    S EE  IA  FN ++LDI+K TVEF+LAAQIGKRVG+EQC+V+Y+RCP  + KLMEI
Sbjct:   93 FRGKRAINEYEEILLSASQEDQNDCAKRLVCEISSLPPTAMSLEEVQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCSVIYKRCPFPRAKLMEI 190
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000007341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526:112093:-1 gene:EMLSAG00000007341 transcript:EMLSAT00000007341 description:"maker-LSalAtl2s414-snap-gene-1.9")

HSP 1 Score: 124.405 bits (311), Expect = 2.492e-35
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 0 
Query:   95 ILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQD 189
            ILLSA+Q D +DCAKRLVCE++  P    S EE  IA  FN ++LDI+K TVEF+LAAQIGKRVG+EQC V+Y+RCPH K KLMEI+ +    ++
Sbjct:   89 ILLSASQEDQNDCAKRLVCEISSLPPTAMSPEEIQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPHSKAKLMEIYKETNVEEE 183
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000000512 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:493556:498566:1 gene:EMLSAG00000000512 transcript:EMLSAT00000000512 description:"maker-LSalAtl2s107-snap-gene-5.72")

HSP 1 Score: 62.7734 bits (151), Expect = 7.018e-13
Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 0 
Query:   88 SLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQ-CAVLYERCPHDKKKLMEIF 181
            +LD Y    L+ A  D  DC K+ VCE+        + EE MIA LF    LD      E+DLAA +G+    +  CA  Y+RCP D+K + + F
Sbjct:   94 ALDSY---FLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000003871 (pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516:891122:-1 gene:EMLSAG00000003871 transcript:EMLSAT00000003871 description:"maker-LSalAtl2s20-augustus-gene-8.8")

HSP 1 Score: 55.8398 bits (133), Expect = 2.433e-10
Identity = 32/89 (35.96%), Postives = 41/89 (46.07%), Query Frame = 0 
Query:  101 QNDASDCAKRLVCEVNGTPLENFSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQ 188
            Q D SDC K LVCEV  TP     +EE +IA LF N         T E+  AA +G     + C   Y  C    K+L+++    T  Q
Sbjct:   91 QADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKVVEAHTGAQ 179
[Close]
BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Match: EMLSAP00000006935 (pep:novel supercontig:LSalAtl2s:LSalAtl2s393:562990:566673:1 gene:EMLSAG00000006935 transcript:EMLSAT00000006935 description:"augustus_masked-LSalAtl2s393-processed-gene-5.2")

HSP 1 Score: 47.7506 bits (112), Expect = 2.649e-7
Identity = 27/90 (30.00%), Postives = 47/90 (52.22%), Query Frame = 0 
Query:   91 EYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEI 180
            + E  L  ++  D S+C K+L+C ++  P    + +E +IA   +P  L      ++  LAA++G      QC  +Y RCP +K +LM +
Sbjct:   61 QIEEELRESSVQDTSECIKKLICIIHSIPSPERTWDERIIAEAISPK-LVFKSQHIQLQLAARLG-YAQPSQCYDVYSRCPFEKHQLMTL 148
[Close]
BLAST of EMLSAG00000012084 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold39_size501901-snap-gene-2.7 (protein:Tk00983 transcript:maker-scaffold39_size501901-snap-gene-2.7-mRNA-1 annotation:"glutamate ionotropic kainate 2")

HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-23
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0 
Query:   88 SLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNP-DHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDP 184
            S+   E   L A+  DA DCAK LVC +N  P E+ S+EE +IA +F   D ++++K +VEFDLAA +G++ G  QC  LY RCPH++K L++    P
Sbjct:   76 SVSSIEDSFLQASLVDADDCAKMLVCLINSAPAEDLSEEEEIIAEMFGQNDEINVSKSSVEFDLAALVGRKAGASQCKSLYARCPHNQKYLIDTLRSP 173

HSP 2 Score: 78.9518 bits (193), Expect = 1.434e-17
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:   88 SLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLF-NPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIF 181
            S++  E   L+A+ +DA DCAK++VC V     E+ +  E  +  +F   + +D++K +VEFDLAA +G++VG  QC  +Y RCPH +  L+ IF
Sbjct:  248 SVNSVEDAFLAASVDDADDCAKKMVCMVYAKDQESLTDVEQALVEMFGQSEVIDVSKSSVEFDLAALVGRKVGSLQCKSVYARCPHHEDFLVGIF 342
[Close]
BLAST of EMLSAG00000012084 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold559_size137194-snap-gene-0.28 (protein:Tk04624 transcript:maker-scaffold559_size137194-snap-gene-0.28-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 57.3806 bits (137), Expect = 6.246e-11
Identity = 33/99 (33.33%), Postives = 50/99 (50.51%), Query Frame = 0 
Query:   89 LDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEET--MIARLFNPD---HLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFN 182
            +DE    L +A+Q D   C K+++C VN    +++  +E   +   +F  D    LD     V+ DLAA+IGK  G + C ++Y RC    K   EI N
Sbjct:   60 MDEALVYLRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRC---TKSTQEILN 155
[Close]
BLAST of EMLSAG00000012084 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold316_size209483-snap-gene-1.38 (protein:Tk05941 transcript:maker-scaffold316_size209483-snap-gene-1.38-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC103505216")

HSP 1 Score: 57.3806 bits (137), Expect = 8.486e-11
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 0 
Query:   96 LLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIF 181
            L SA+  D++DCAKRL+CE+     +    +E +I +   P  LD     ++F LAA +G++   EQC+++Y RC  + + +M++ 
Sbjct:   65 LQSASIQDSTDCAKRLICELKSK--KELDWDEELIMQTIPP-QLDYASPIIQFQLAADLGQK-NPEQCSIVYSRCHFNGEDIMKLM 146
[Close]
BLAST of EMLSAG00000012084 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold197_size267318-snap-gene-1.35 (protein:Tk09461 transcript:maker-scaffold197_size267318-snap-gene-1.35-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 56.6102 bits (135), Expect = 2.279e-10
Identity = 48/188 (25.53%), Postives = 78/188 (41.49%), Query Frame = 0 
Query:   10 LMASCIVLSEATLILPALAVGKG------ALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLD----EYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDH---LDITKITVEFDLAAQIGKRVGIE-QCAVLYERCPHDKKKLMEIFND 183
            L A  I+ +   L +P LA   G      A++GL  +  AA   G    L S  GR  +    YH++    HR         +RS D      + +    +  D   C K+LVCE+          +E++I  LF       L++     E++LAAQ+G+    +  C   Y  CP+   ++M+   +
Sbjct:   47 LGAGGILANNGILTIPLLAATAGTLATPLAVLGLIKLGAAALIAGGFVALGSLRGRNNDDEEVYHESSSGYHRR--------RRSADIAAPNPDALFALISSMDTHGCGKQLVCELEAKDARQLQGDESLILSLFGDKQKKGLNVASAKAEYELAAQLGQITKSQVMCRQRYTTCPYTGTEMMKALRE 226
The following BLAST results are available for this feature:
BLAST of EMLSAG00000012084 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012084 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 24
Match NameE-valueIdentityDescription
gi|592926123|gb|GAXK01032308.1|4.794e-1136.84TSA: Calanus finmarchicus comp21077_c1_seq1 transc... [more]
gi|592858052|gb|GAXK01099510.1|5.351e-1136.14TSA: Calanus finmarchicus comp446632_c0_seq1 trans... [more]
gi|592835767|gb|GAXK01121777.1|5.633e-1143.66TSA: Calanus finmarchicus comp107205_c3_seq2 trans... [more]
gi|592835768|gb|GAXK01121776.1|7.902e-1143.66TSA: Calanus finmarchicus comp107205_c3_seq1 trans... [more]
gi|592830700|gb|GAXK01126844.1|1.036e-1036.14TSA: Calanus finmarchicus comp47414_c0_seq3 transc... [more]
gi|592830701|gb|GAXK01126843.1|2.034e-1036.14TSA: Calanus finmarchicus comp47414_c0_seq2 transc... [more]
gi|592830702|gb|GAXK01126842.1|1.115e-937.35TSA: Calanus finmarchicus comp47414_c0_seq1 transc... [more]
gi|592935479|gb|GAXK01023074.1|2.240e-630.59TSA: Calanus finmarchicus comp114460_c1_seq1 trans... [more]
gi|592833102|gb|GAXK01124442.1|3.847e-630.97TSA: Calanus finmarchicus comp24536_c0_seq1 transc... [more]
gi|592835758|gb|GAXK01121786.1|3.136e-542.86TSA: Calanus finmarchicus comp107205_c5_seq7 trans... [more]

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BLAST of EMLSAG00000012084 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 9
Match NameE-valueIdentityDescription
EMLSAP000000120843.773e-141100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s864:14109... [more]
EMLSAP000000073392.914e-6755.73pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:... [more]
EMLSAP000000120851.349e-6157.67pep:novel supercontig:LSalAtl2s:LSalAtl2s864:16517... [more]
EMLSAP000000120831.999e-4349.74pep:novel supercontig:LSalAtl2s:LSalAtl2s864:10512... [more]
EMLSAP000000073365.937e-3759.00pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152... [more]
EMLSAP000000073412.492e-3560.00pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526... [more]
EMLSAP000000005127.018e-1337.89pep:novel supercontig:LSalAtl2s:LSalAtl2s107:49355... [more]
EMLSAP000000038712.433e-1035.96pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516... [more]
EMLSAP000000069352.649e-730.00pep:novel supercontig:LSalAtl2s:LSalAtl2s393:56299... [more]
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BLAST of EMLSAG00000012084 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012084 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012084 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012084 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold39_size501901-snap-gene-2.72.020e-2344.90protein:Tk00983 transcript:maker-scaffold39_size50... [more]
maker-scaffold559_size137194-snap-gene-0.286.246e-1133.33protein:Tk04624 transcript:maker-scaffold559_size1... [more]
maker-scaffold316_size209483-snap-gene-1.388.486e-1133.72protein:Tk05941 transcript:maker-scaffold316_size2... [more]
maker-scaffold197_size267318-snap-gene-1.352.279e-1025.53protein:Tk09461 transcript:maker-scaffold197_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s864supercontigLSalAtl2s864:141096..141668 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s864-processed-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000012084 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000012084EMLSAT00000012084-707931Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s864:141096..141668+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000012084-694850 ID=EMLSAG00000012084-694850|Name=EMLSAG00000012084|organism=Lepeophtheirus salmonis|type=gene|length=573bp|location=Sequence derived from alignment at LSalAtl2s864:141096..141668+ (Lepeophtheirus salmonis)
ATGAGAGCAATAATCTTGTTTGGAGCCTTAATGGCCAGCTGTATAGTTCT
TTCTGAAGCAACTCTTATTTTACCAGCACTTGCTGTAGGAAAAGGAGCTC
TTATTGGGTTAGCTCTTATTAAAAAAGCCGCTTTTAAAGTTGGTTTCGTT
GGTGGACTCATAAGTCGCGGGGGTAGGCGTAGAAATTATCGTCCCAGATA
CCATCAAAATTTCGGATATAATCATCGTCACCATGGTTTTCAAAACTACC
GATTCAAACGCTCCCTTGATGAGTATGAGACCATACTTCTTTCCGCAGCA
CAAAATGACGCATCTGACTGCGCAAAGAGATTGGTCTGTGAAGTAAATGG
AACCCCCCTTGAAAATTTTAGCAAGGAAGAAACTATGATTGCTCGATTAT
TCAATCCTGATCACTTGGATATTACAAAAATCACTGTTGAATTCGATCTT
GCCGCTCAGATTGGTAAGCGTGTTGGTATTGAACAATGTGCTGTTCTCTA
TGAAAGGTGCCCTCACGATAAGAAAAAATTGATGGAAATTTTCAATGATC
CTACTTTTGGACAGGATGTTTAA
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