EMLSAG00000012085, EMLSAG00000012085-694851 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000012085
Unique NameEMLSAG00000012085-694851
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592926123|gb|GAXK01032308.1| (TSA: Calanus finmarchicus comp21077_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 64.6994 bits (156), Expect = 3.699e-12
Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 0 
Query:   70 HYGKRSIDE----FESVLLSASQHDASDCAKKLVCEV-----SGLTLEDMNSEETMIARLFNP-DHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFR 169
            H  KR IDE            ++ D   C KKL+CE+     SG++   M+++E +IA  F     +DV+  TVEFDLAAQIG  +G  +C  +Y RC  S   ++ + R
Sbjct:  144 HRMKRDIDENGFNMNDWYRDMTEMDQDSCGKKLICELRSKEASGVS---MSADEKLIAEKFGSGKQVDVSDITVEFDLAAQIGLNMGEARCGQLYNRCDTSTEDMVKMIR 464
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BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592858052|gb|GAXK01099510.1| (TSA: Calanus finmarchicus comp446632_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 1.887e-10
Identity = 29/79 (36.71%), Postives = 51/79 (64.56%), Query Frame = 0 
Query:   90 DASDCAKKLVCEVSGL--TLEDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLI 165
            D  DC+K+LVCE++ +    + ++  E ++A  F N   LDV K ++EFD+AA +G+ VG+++C + Y RC    +Q++
Sbjct:  437 DQDDCSKRLVCELNAMRSNGQVLSQHEEVLANAFGNSGELDVGKNSLEFDIAAVLGREVGMRRCELSYRRCETPVQQML 673
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BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592835767|gb|GAXK01121777.1| (TSA: Calanus finmarchicus comp107205_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 59.3066 bits (142), Expect = 3.891e-10
Identity = 28/79 (35.44%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:   90 DASDCAKKLVCEVSGLTL--EDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLI 165
            D  DC+K+LVCE++ +    ++++  E ++A  F N   LD+ K ++EFD+AA +G+ VG ++C + Y RC     Q++
Sbjct:   85 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRCETPVSQML 321
[Close]
BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592835768|gb|GAXK01121776.1| (TSA: Calanus finmarchicus comp107205_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 58.9214 bits (141), Expect = 5.283e-10
Identity = 28/79 (35.44%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:   90 DASDCAKKLVCEVSGLTL--EDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLI 165
            D  DC+K+LVCE++ +    ++++  E ++A  F N   LD+ K ++EFD+AA +G+ VG ++C + Y RC     Q++
Sbjct:  156 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRCETPVSQML 392
[Close]
BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592830700|gb|GAXK01126844.1| (TSA: Calanus finmarchicus comp47414_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 55.0694 bits (131), Expect = 2.270e-9
Identity = 27/83 (32.53%), Postives = 49/83 (59.04%), Query Frame = 0 
Query:   89 HDASDCAKKLVCEVSGLTLED--MNSEETMIARLFNPDH-LDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIF 168
             D  DC+K+L+CE++   +E   +   E +IA  F  ++ +D+   T+EFDLAA +GK+ G ++C + + RC     Q++ + 
Sbjct:   19 KDQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKMI 267
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BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592833102|gb|GAXK01124442.1| (TSA: Calanus finmarchicus comp24536_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 57.3806 bits (137), Expect = 2.713e-9
Identity = 38/116 (32.76%), Postives = 61/116 (52.59%), Query Frame = 0 
Query:   68 NRHYGKRSIDEFESVLLSA---------SQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNP-DHLDVTKATVEFDLAAQIGKRVGIQQCSVI----YERCPHSRRQLIDIFR 169
            +R  GKRS+DE    + SA         ++ D +DC K LVCE+  ++  D++ +E  I  LF+  +H+D +    E+ LAA +G    + Q   I    Y +CP S  +++DI R
Sbjct:  265 SRSRGKRSVDEDAEKVSSAQFNDFFDVIAKSDVADCGKLLVCEL--MSRVDLDQDEKRIVNLFDDLEHIDPSSGRSEYQLAAYLG---SLNQTEAICVRRYSKCPMSTEEVMDIVR 597
[Close]
BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592830702|gb|GAXK01126842.1| (TSA: Calanus finmarchicus comp47414_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 3.773e-9
Identity = 28/71 (39.44%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   90 DASDCAKKLVCEVSGLTLE--DMNSEETMIARLFNPDH-LDVTKATVEFDLAAQIGKRVGIQQCSVIYERC 157
            D  DC+K+L+CE++    E  D+   E +IA  F  ++ +D+   T+EFDLAA +GK  G+++C + Y RC
Sbjct:  282 DQDDCSKRLLCELNARKAEGQDLTENEQIIADSFGKNNNIDIGVETLEFDLAAVLGKEGGLRRCELSYRRC 494
[Close]
BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592830701|gb|GAXK01126843.1| (TSA: Calanus finmarchicus comp47414_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 55.0694 bits (131), Expect = 8.882e-9
Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 0 
Query:   90 DASDCAKKLVCEVSGLTLED--MNSEETMIARLFNPDH-LDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDI 167
            D  DC+K+L+CE++   +E   +   E +IA  F  ++ +D+   T+EFDLAA +GK+ G ++C + + RC     Q++ +
Sbjct:   22 DQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKM 264
[Close]
BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592935479|gb|GAXK01023074.1| (TSA: Calanus finmarchicus comp114460_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 1.301e-6
Identity = 29/98 (29.59%), Postives = 47/98 (47.96%), Query Frame = 0 
Query:   68 NRHYGKRSID----EFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHL--DVTKATVEFDLAAQIGKRV-GIQQCSVIYERCP 158
            N   GKR +     +FE V    S  D +DCAK+ VCE+S    + +++++     +F    L    T A  E+D+A   G      + C  +Y++CP
Sbjct:  533 NYGRGKREVSGVKLDFEHVFQKISAMDVNDCAKRYVCEISATPRDHLSAQDISTLSMFGQHVLKSKTTSAKYEYDMAWARGNTAENAETCKNVYKKCP 826
[Close]
BLAST of EMLSAG00000012085 vs. C. finmarchicus
Match: gi|592835351|gb|GAXK01122193.1| (TSA: Calanus finmarchicus comp106377_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.089e-5
Identity = 25/87 (28.74%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:   83 LLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFR 169
            L  A+ HD  DCAKKL+CE++    E +  +E ++ + ++   ++    ++ F++A ++GK  G ++C  +Y RC     ++++I R
Sbjct:  362 LNDANYHDTDDCAKKLLCELT--KKEGLEWDEELLIKYYD-QPVNYGSDSLFFNIAVKVGKD-GERECFDVYPRCILDLSEMLEILR 610
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000012085 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1 gene:EMLSAG00000012085 transcript:EMLSAT00000012085 description:"maker-LSalAtl2s864-augustus-gene-0.15")

HSP 1 Score: 352.829 bits (904), Expect = 4.504e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 
Query:    1 MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNEF 177
            MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNEF
Sbjct:    1 MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNEF 177
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000007339 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gene:EMLSAG00000007339 transcript:EMLSAT00000007339 description:"snap_masked-LSalAtl2s414-processed-gene-0.6")

HSP 1 Score: 289.656 bits (740), Expect = 1.345e-99
Identity = 156/193 (80.83%), Postives = 168/193 (87.05%), Query Frame = 0 
Query:    1 MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRN----------------RHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNEF 177
            M+GT L +AFMA C SL+QATLILPA+TIGGGALAGLA+LK  AIKGGIIGALIA GXGRGGRRGGR                 R++GKRSID+FESVLLSASQHDASDCAKKLVCEVSGLTLED+NSEETMIARLFNPDHLDVTKATVEFDLAAQIGK VGIQQCS+IY+RCPHSRR+LIDIFRDPRLGNEF
Sbjct:   26 MKGTHLTLAFMATCLSLSQATLILPALTIGGGALAGLAILKVAAIKGGIIGALIAXGXGRGGRRGGRRGGGRGGRRGGRRGGSLRYFGKRSIDDFESVLLSASQHDASDCAKKLVCEVSGLTLEDINSEETMIARLFNPDHLDVTKATVEFDLAAQIGKHVGIQQCSIIYQRCPHSRRKLIDIFRDPRLGNEF 218
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000012084 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1 gene:EMLSAG00000012084 transcript:EMLSAT00000012084 description:"augustus_masked-LSalAtl2s864-processed-gene-0.1")

HSP 1 Score: 227.254 bits (578), Expect = 1.867e-75
Identity = 112/189 (59.26%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRR-------GGRNRHYG------KRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNE 176
            MR   L  A MA C  L++ATLILPA+ +G GAL GLAL+K  A K G +G LI+RG  R   R       G  +RH+G      KRS+DE+E++LLSA+Q+DASDCAK+LVCEV+G  LE+ + EETMIARLFNPDHLD+TK TVEFDLAAQIGKRVGI+QC+V+YERCPH +++L++IF DP  G +
Sbjct:    1 MRAIILFGALMASCIVLSEATLILPALAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTFGQD 189
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000012083 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1 gene:EMLSAG00000012083 transcript:EMLSAT00000012083 description:"maker-LSalAtl2s864-augustus-gene-0.14")

HSP 1 Score: 155.606 bits (392), Expect = 1.696e-47
Identity = 79/132 (59.85%), Postives = 97/132 (73.48%), Query Frame = 0 
Query:   45 IKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNE 176
            IKG + GA+I RG               KRS  + ES+LLSASQ D SDCAKKLVCEV+GL+  ++ SE  MIA LFN D LD++KATVEFDLAAQIGKRVG +QC+VIYERCPH+R++L+ IFRDP L ++
Sbjct:   72 IKGLVAGAIIGRG---------------KRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQ 188
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000007336 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 gene:EMLSAG00000007336 transcript:EMLSAT00000007336 description:"maker-LSalAtl2s414-augustus-gene-0.14")

HSP 1 Score: 134.035 bits (336), Expect = 1.744e-37
Identity = 58/105 (55.24%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:   72 GKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNE 176
            GKR+I+E+E +LLS+SQ D +DC K+LVCE+S L    M+ EE  IA +FN ++LD++KATVEF+LAAQIGKRVG++QC VIY+RCP+ R +L++I+    + +E
Sbjct:  294 GKRAINEYEEILLSSSQEDQNDCTKRLVCEISSLPPTAMSPEEIQIASVFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPYPRAKLMEIYSKTNVEDE 398

HSP 2 Score: 133.65 bits (335), Expect = 2.753e-37
Identity = 60/96 (62.50%), Postives = 79/96 (82.29%), Query Frame = 0 
Query:   72 GKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDI 167
            GKR+I+E+E +LLSASQ D +DCAK+LVCE+S L    M+ EE  IA  FN ++LD++KATVEF+LAAQIGKRVG++QCSVIY+RCP  R +L++I
Sbjct:   95 GKRAINEYEEILLSASQEDQNDCAKRLVCEISSLPPTAMSLEEVQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCSVIYKRCPFPRAKLMEI 190
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000007341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526:112093:-1 gene:EMLSAG00000007341 transcript:EMLSAT00000007341 description:"maker-LSalAtl2s414-snap-gene-1.9")

HSP 1 Score: 125.176 bits (313), Expect = 8.189e-36
Identity = 55/95 (57.89%), Postives = 76/95 (80.00%), Query Frame = 0 
Query:   82 VLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRLGNE 176
            +LLSASQ D +DCAK+LVCE+S L    M+ EE  IA  FN ++LD++KATVEF+LAAQIGKRVG++QC VIY+RCPHS+ +L++I+++  +  E
Sbjct:   89 ILLSASQEDQNDCAKRLVCEISSLPPTAMSPEEIQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPHSKAKLMEIYKETNVEEE 183
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000000512 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:493556:498566:1 gene:EMLSAG00000000512 transcript:EMLSAT00000000512 description:"maker-LSalAtl2s107-snap-gene-5.72")

HSP 1 Score: 68.9366 bits (167), Expect = 4.857e-15
Identity = 41/125 (32.80%), Postives = 59/125 (47.20%), Query Frame = 0 
Query:   45 IKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQ-CSVIYERCPHSRRQLIDIF 168
            +KG IIG+L+         R  R+       +   +S  L+ +  D  DC KK VCE+  L      +EE MIA LF    LD      E+DLAA +G+    +  C+  Y+RCP  R+ +   F
Sbjct:   70 VKGAIIGSLL---------RNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000003871 (pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516:891122:-1 gene:EMLSAG00000003871 transcript:EMLSAT00000003871 description:"maker-LSalAtl2s20-augustus-gene-8.8")

HSP 1 Score: 61.2326 bits (147), Expect = 2.313e-12
Identity = 46/141 (32.62%), Postives = 62/141 (43.97%), Query Frame = 0 
Query:   28 TIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDI 167
            T+G  ALAGLA+ K    +  II AL      RG R     +      ++ F     +  Q D SDC K LVCEV      ++  EE +IA LF N        AT E+  AA +G     Q C   Y  C    ++L+ +
Sbjct:   42 TLGVAALAGLAIAK----EKLIISAL----SNRGKRDVSAVQEAKNVDLNAF---FWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
[Close]
BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Match: EMLSAP00000006935 (pep:novel supercontig:LSalAtl2s:LSalAtl2s393:562990:566673:1 gene:EMLSAG00000006935 transcript:EMLSAT00000006935 description:"augustus_masked-LSalAtl2s393-processed-gene-5.2")

HSP 1 Score: 49.6766 bits (117), Expect = 3.152e-8
Identity = 28/92 (30.43%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:   78 EFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFR 169
            + E  L  +S  D S+C KKL+C +  +   +   +E +IA   +P  L      ++  LAA++G      QC  +Y RCP  + QL+ + R
Sbjct:   61 QIEEELRESSVQDTSECIKKLICIIHSIPSPERTWDERIIAEAISPK-LVFKSQHIQLQLAARLG-YAQPSQCYDVYSRCPFEKHQLMTLIR 150
[Close]
BLAST of EMLSAG00000012085 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold39_size501901-snap-gene-2.7 (protein:Tk00983 transcript:maker-scaffold39_size501901-snap-gene-2.7-mRNA-1 annotation:"glutamate ionotropic kainate 2")

HSP 1 Score: 98.9821 bits (245), Expect = 1.039e-24
Identity = 67/187 (35.83%), Postives = 94/187 (50.27%), Query Frame = 0 
Query:    1 MRGTFLNIAFMAXCFSLTQATLILPAITIGGGALA---GLALLKAXAIKGGIIGALIARGXGRG------------GRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDP 171
            M  +F  +A +     LT+A          GG ++   GLA+        GIIG  IA G G G                G +     RS+   E   L AS  DA DCAK LVC ++    ED++ EE +IA +F   D ++V+K++VEFDLAA +G++ G  QC  +Y RCPH+++ LID  R P
Sbjct:    1 MNKSFAIVALLVASSCLTEAIF-------DGGIVSIPVGLAV-------AGIIGLKIAGGIGLGVGFAAGRGGRGGRGGRGGHGGRFGRSVSSIEDSFLQASLVDADDCAKMLVCLINSAPAEDLSEEEEIIAEMFGQNDEINVSKSSVEFDLAALVGRKAGASQCKSLYARCPHNQKYLIDTLRSP 173

HSP 2 Score: 84.3445 bits (207), Expect = 1.272e-19
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 0 
Query:   75 SIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLF-NPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIF 168
            S++  E   L+AS  DA DCAKK+VC V     E +   E  +  +F   + +DV+K++VEFDLAA +G++VG  QC  +Y RCPH    L+ IF
Sbjct:  248 SVNSVEDAFLAASVDDADDCAKKMVCMVYAKDQESLTDVEQALVEMFGQSEVIDVSKSSVEFDLAALVGRKVGSLQCKSVYARCPHHEDFLVGIF 342
[Close]
BLAST of EMLSAG00000012085 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold316_size209483-snap-gene-1.38 (protein:Tk05941 transcript:maker-scaffold316_size209483-snap-gene-1.38-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC103505216")

HSP 1 Score: 59.6918 bits (143), Expect = 1.072e-11
Identity = 29/87 (33.33%), Postives = 54/87 (62.07%), Query Frame = 0 
Query:   83 LLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFR 169
            L SAS  D++DCAK+L+CE+   + ++++ +E +I +   P  LD     ++F LAA +G++   +QCS++Y RC  +   ++ + R
Sbjct:   65 LQSASIQDSTDCAKRLICELK--SKKELDWDEELIMQTIPP-QLDYASPIIQFQLAADLGQK-NPEQCSIVYSRCHFNGEDIMKLMR 147
[Close]
BLAST of EMLSAG00000012085 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold559_size137194-snap-gene-0.28 (protein:Tk04624 transcript:maker-scaffold559_size137194-snap-gene-0.28-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 57.3806 bits (137), Expect = 5.336e-11
Identity = 33/96 (34.38%), Postives = 49/96 (51.04%), Query Frame = 0 
Query:   75 SIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEET--MIARLFNPD---HLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLI 165
             +DE    L +ASQ D   C KK++C V+    +D   +E   +   +F  D    LD     V+ DLAA+IGK  G   C +IY RC  S ++++
Sbjct:   59 DMDEALVYLRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCTKSTQEIL 154
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BLAST of EMLSAG00000012085 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold197_size267318-snap-gene-1.35 (protein:Tk09461 transcript:maker-scaffold197_size267318-snap-gene-1.35-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 53.9138 bits (128), Expect = 2.121e-9
Identity = 47/174 (27.01%), Postives = 73/174 (41.95%), Query Frame = 0 
Query:   22 LILPAITIGGGALA------GLALLKAXAIKGGIIGALIARGXGRG--------GRRGGRNRHYGKRSID----EFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDH---LDVTKATVEFDLAAQIGKRVGIQ-QCSVIYERCPHSRRQLIDIFRDPRL 173
            L +P +    G LA      GL  L A A+   I G  +A G  RG                H  +RS D      +++    S  D   C K+LVCE+       +  +E++I  LF       L+V  A  E++LAAQ+G+    Q  C   Y  CP++  +++   R+  +
Sbjct:   59 LTIPLLAATAGTLATPLAVLGLIKLGAAAL---IAGGFVALGSLRGRNNDDEEVYHESSSGYHRRRRSADIAAPNPDALFALISSMDTHGCGKQLVCELEAKDARQLQGDESLILSLFGDKQKKGLNVASAKAEYELAAQLGQITKSQVMCRQRYTTCPYTGTEMMKALRESNI 229
The following BLAST results are available for this feature:
BLAST of EMLSAG00000012085 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012085 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 24
Match NameE-valueIdentityDescription
gi|592926123|gb|GAXK01032308.1|3.699e-1236.36TSA: Calanus finmarchicus comp21077_c1_seq1 transc... [more]
gi|592858052|gb|GAXK01099510.1|1.887e-1036.71TSA: Calanus finmarchicus comp446632_c0_seq1 trans... [more]
gi|592835767|gb|GAXK01121777.1|3.891e-1035.44TSA: Calanus finmarchicus comp107205_c3_seq2 trans... [more]
gi|592835768|gb|GAXK01121776.1|5.283e-1035.44TSA: Calanus finmarchicus comp107205_c3_seq1 trans... [more]
gi|592830700|gb|GAXK01126844.1|2.270e-932.53TSA: Calanus finmarchicus comp47414_c0_seq3 transc... [more]
gi|592833102|gb|GAXK01124442.1|2.713e-932.76TSA: Calanus finmarchicus comp24536_c0_seq1 transc... [more]
gi|592830702|gb|GAXK01126842.1|3.773e-939.44TSA: Calanus finmarchicus comp47414_c0_seq1 transc... [more]
gi|592830701|gb|GAXK01126843.1|8.882e-933.33TSA: Calanus finmarchicus comp47414_c0_seq2 transc... [more]
gi|592935479|gb|GAXK01023074.1|1.301e-629.59TSA: Calanus finmarchicus comp114460_c1_seq1 trans... [more]
gi|592835351|gb|GAXK01122193.1|1.089e-528.74TSA: Calanus finmarchicus comp106377_c0_seq1 trans... [more]

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BLAST of EMLSAG00000012085 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 9
Match NameE-valueIdentityDescription
EMLSAP000000120854.504e-125100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s864:16517... [more]
EMLSAP000000073391.345e-9980.83pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:... [more]
EMLSAP000000120841.867e-7559.26pep:novel supercontig:LSalAtl2s:LSalAtl2s864:14109... [more]
EMLSAP000000120831.696e-4759.85pep:novel supercontig:LSalAtl2s:LSalAtl2s864:10512... [more]
EMLSAP000000073361.744e-3755.24pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152... [more]
EMLSAP000000073418.189e-3657.89pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526... [more]
EMLSAP000000005124.857e-1532.80pep:novel supercontig:LSalAtl2s:LSalAtl2s107:49355... [more]
EMLSAP000000038712.313e-1232.62pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516... [more]
EMLSAP000000069353.152e-830.43pep:novel supercontig:LSalAtl2s:LSalAtl2s393:56299... [more]
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BLAST of EMLSAG00000012085 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012085 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012085 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012085 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold39_size501901-snap-gene-2.71.039e-2435.83protein:Tk00983 transcript:maker-scaffold39_size50... [more]
maker-scaffold316_size209483-snap-gene-1.381.072e-1133.33protein:Tk05941 transcript:maker-scaffold316_size2... [more]
maker-scaffold559_size137194-snap-gene-0.285.336e-1134.38protein:Tk04624 transcript:maker-scaffold559_size1... [more]
maker-scaffold197_size267318-snap-gene-1.352.121e-927.01protein:Tk09461 transcript:maker-scaffold197_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s864supercontigLSalAtl2s864:165170..165932 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s864-augustus-gene-0.15
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000012085 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000012085EMLSAT00000012085-707932Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s864:165170..165932+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000012085-694851 ID=EMLSAG00000012085-694851|Name=EMLSAG00000012085|organism=Lepeophtheirus salmonis|type=gene|length=763bp|location=Sequence derived from alignment at LSalAtl2s864:165170..165932+ (Lepeophtheirus salmonis)
GATTTTGTATTTCAGCATAGACATTTGTGTTTTACTGTAAAGAAGGTAAG
ATGATCCATATTATGTATTTAAGCAAACTTGCTATATAATCTTTGTACAT
TTATTTTGTAGTCCACAATGAGAGGAACGTTTTTAAATATAGCCTTTATG
GCAGMCTGCTTTTCCCTTACTCAAGCAACACTAATTCTTCCAGCTATCAC
AATCGGTGGTGGAGCTCTCGCAGGATTAGCTCTTCTCAAAGCASCTGCCA
TTAAGGGTGGTATTATTGGAGCTCTTATCGCTCGTGGAAGMGGACGAGGA
GGTAGACGTGGAGGTAGAAATAGACACTACGGCAAACGTTCCATCGATGA
ATTTGAATCTGTTTTACTCTCTGCCTCTCAACACGATGCTTCTGACTGTG
CTAAAAAATTAGTCTGTGAAGTGAGTGGACTTACTTTGGAGGATATGAAC
TCTGAGGAAACCATGATCGCTCGTCTATTCAATCCTGATCATTTGGACGT
CACGAAAGCTACAGTTGAATTCGATTTAGCTGCTCAAATTGGAAAACGCG
TTGGAATCCAACAATGCTCAGTCATCTATGAAAGATGTCCTCACAGCAGA
CGTCAATTAATTGACATTTTCAGAGATCCCCGATTGGGAAATGAATTCTA
AGTATTAGCTGTACCATGTCCAACCTTTATACCAAATGTTTATGTATCCT
CATGTAAATCAAATTTATAGATAAATGTATAACAAAACAAATATATCTAC
TATTTACTATTTA
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