EMLSAG00000012812, EMLSAG00000012812-695578 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012812 vs. C. finmarchicus
Match: gi|592886696|gb|GAXK01071679.1| (TSA: Calanus finmarchicus comp733946_c0_seq3 transcribed RNA sequence) HSP 1 Score: 105.531 bits (262), Expect = 2.311e-25 Identity = 55/157 (35.03%), Postives = 94/157 (59.87%), Query Frame = 0 Query: 323 EMANEKFEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFKDIQIKMTFRLTGDGEIQIISVKTTFSDSKFVPTYDSSIPLNPWSKVSMSGYLVSKXKKSMPSIIDKTL 479 E+ NE +E V+ ++ DP+ L + Y NLT+ G+S + C + WK ++C +L++ ++ +SGP +PF GKV +I+ + Q+ + + D +++ S+ +KF P +DS++PLNPWSKVS+ GY+VSK KK M +++K L Sbjct: 89 EVENE-IKEMVENFISTYDDPMVITGHLPTPYHNLTMTGLSSSTICSITHPAHS--WKVSLCPDSLTATVSITSGPNMPFNGKVTAIYTNPQLNLVLTHSKD-LLRLTSINLASDSAKFYPAFDSAVPLNPWSKVSLGGYMVSKAKKMMGKLVEKEL 547
BLAST of EMLSAG00000012812 vs. C. finmarchicus
Match: gi|592886698|gb|GAXK01071677.1| (TSA: Calanus finmarchicus comp733946_c0_seq1 transcribed RNA sequence) HSP 1 Score: 109.383 bits (272), Expect = 7.117e-25 Identity = 53/151 (35.10%), Postives = 91/151 (60.26%), Query Frame = 0 Query: 329 FEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFKDIQIKMTFRLTGDGEIQIISVKTTFSDSKFVPTYDSSIPLNPWSKVSMSGYLVSKXKKSMPSIIDKTL 479 +E V K ++ DP+ L + Y NLT+ G+S + C + + WK ++C +L++ ++ +SGP +PF GKV +I+ + Q+ + + D +++ S+ +KF P +DS++PLNPWSKVS+ GY+VSK KK M +++K L Sbjct: 89 IKEMVDKFISTYDDPMVITGHLPTPYHNLTMTGLSSSTICSITHPA--HSWKVSLCPDSLTATVSITSGPNMPFNGKVTAIYTNPQLNLVLTHSKD-LLRLTSINLASDSAKFYPAFDSAVPLNPWSKVSLGGYMVSKAKKMMGKLVEKEL 532
BLAST of EMLSAG00000012812 vs. C. finmarchicus
Match: gi|592886697|gb|GAXK01071678.1| (TSA: Calanus finmarchicus comp733946_c0_seq2 transcribed RNA sequence) HSP 1 Score: 107.457 bits (267), Expect = 1.268e-24 Identity = 53/151 (35.10%), Postives = 91/151 (60.26%), Query Frame = 0 Query: 329 FEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFKDIQIKMTFRLTGDGEIQIISVKTTFSDSKFVPTYDSSIPLNPWSKVSMSGYLVSKXKKSMPSIIDKTL 479 +E V K ++ DP+ L + Y NLT+ G+S + C + + WK ++C +L++ ++ +SGP +PF GKV +I+ + Q+ + + D +++ S+ +KF P +DS++PLNPWSKVS+ GY+VSK KK M +++K L Sbjct: 89 IKEMVDKFISTYDDPMVITGHLPTPYHNLTMTGLSSSTICSITHPA--HSWKVSLCPDSLTATVSITSGPNMPFNGKVTAIYTNPQLNLVLTHSKD-LLRLTSINLASDSAKFYPAFDSAVPLNPWSKVSLGGYMVSKAKKMMGKLVEKEL 532
BLAST of EMLSAG00000012812 vs. L. salmonis peptides
Match: EMLSAP00000012812 (pep:novel supercontig:LSalAtl2s:LSalAtl2s977:147875:150905:1 gene:EMLSAG00000012812 transcript:EMLSAT00000012812 description:"maker-LSalAtl2s977-augustus-gene-1.10") HSP 1 Score: 991.875 bits (2563), Expect = 0.000e+0 Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0 Query: 1 MNISGRRRLLLRPVIRFLLYSLICIYTISAQGTVHERGLADFGGDVGQYMSLLKGSSAFSFKPEDMTEEKRSDDENSVRTRRFPGFGRKRNMPEDAYEPKPEEIEEKDAGYHTKSDEGDGGWDVGPDQTARDSSLGDFGGDYGNYLKLLEGESALGFNPQPDPMSDDTDIQSDVFGGGISGKFWDMYKGSSSYDSLDEDDSEVAEELGLNEFYESEDLLRQTTEEDFPNLKRTMAXGXARFKDETYIVTFKPSKSKMVQLYDDLKSAYNSDDKEKMNKILDSLDVRKLFKKEENNPVRPSRKIMVINDDEFEDDSSMDESKLEMANEKFEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFKDIQIKMTFRLTGDGEIQIISVKTTFSDSKFVPTYDSSIPLNPWSKVSMSGYLVSKXKKSMPSIIDKTLLRLTHVVQNLDS 491 MNISGRRRLLLRPVIRFLLYSLICIYTISAQGTVHERGLADFGGDVGQYMSLLKGSSAFSFKPEDMTEEKRSDDENSVRTRRFPGFGRKRNMPEDAYEPKPEEIEEKDAGYHTKSDEGDGGWDVGPDQTARDSSLGDFGGDYGNYLKLLEGESALGFNPQPDPMSDDTDIQSDVFGGGISGKFWDMYKGSSSYDSLDEDDSEVAEELGLNEFYESEDLLRQTTEEDFPNLKRTMAXGXARFKDETYIVTFKPSKSKMVQLYDDLKSAYNSDDKEKMNKILDSLDVRKLFKKEENNPVRPSRKIMVINDDEFEDDSSMDESKLEMANEKFEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFKDIQIKMTFRLTGDGEIQIISVKTTFSDSKFVPTYDSSIPLNPWSKVSMSGYLVSKXKKSMPSIIDKTLLRLTHVVQNLDS Sbjct: 1 MNISGRRRLLLRPVIRFLLYSLICIYTISAQGTVHERGLADFGGDVGQYMSLLKGSSAFSFKPEDMTEEKRSDDENSVRTRRFPGFGRKRNMPEDAYEPKPEEIEEKDAGYHTKSDEGDGGWDVGPDQTARDSSLGDFGGDYGNYLKLLEGESALGFNPQPDPMSDDTDIQSDVFGGGISGKFWDMYKGSSSYDSLDEDDSEVAEELGLNEFYESEDLLRQTTEEDFPNLKRTMAXGXARFKDETYIVTFKPSKSKMVQLYDDLKSAYNSDDKEKMNKILDSLDVRKLFKKEENNPVRPSRKIMVINDDEFEDDSSMDESKLEMANEKFEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFKDIQIKMTFRLTGDGEIQIISVKTTFSDSKFVPTYDSSIPLNPWSKVSMSGYLVSKXKKSMPSIIDKTLLRLTHVVQNLDS 491
BLAST of EMLSAG00000012812 vs. L. salmonis peptides
Match: EMLSAP00000006702 (pep:novel supercontig:LSalAtl2s:LSalAtl2s371:618604:636364:1 gene:EMLSAG00000006702 transcript:EMLSAT00000006702 description:"maker-LSalAtl2s371-augustus-gene-5.16") HSP 1 Score: 224.172 bits (570), Expect = 3.303e-67 Identity = 155/439 (35.31%), Postives = 225/439 (51.25%), Query Frame = 0 Query: 8 RLLLRPVIRFLLYSLICIYTISAQGTVHERGLADFGGDVGQYMSLLKGSSAFSFKP--EDMTE--EKRSDDENSVRTRRFPGFG-------------RKRNMPEDAYEPKPEEIEEKDAGYHTKSDEGDGGWDVGPDQTARD----------------SSLGDFGGDYGNYLKLLEGESALGFNPQPDPMSDDTDIQSDVFGGGISGKFWDMYK--GSSSYDSLDEDDSEVAEELGLNEFYESEDLLRQTTEEDFPNLKRTMAXGXARFKDETYIVTFKPSKSKMVQLYDDLKSAYNSDDKEKMNKILDSLDVRKLFKKEENNPVRPSRKIMVINDDEFEDDSSMDESKLEMANEKFEEFVKKIKNSIPDPIETNKGLSSSYKNLTLYGVSKISTCKPVKKSFGNHWKGTVCLPNLSSMITSSSGPGVPFKGKVISIFK 411 R ++ P + LL S + + + R + FGGD GQYM++L SFKP D + + R +S+ R FPG G KRN + K + SD+ WD Q+ RD S +GDFGGDYG Y+K++E D +S++ D+Q+DVFGGG+SGK+WD+ G + D +DS+ + L + RQ+ EED P + +TYIV FK K ++V Y++LK++ + DK ++N +LDSL+ R+L +EE+ V+ RKIM+I DD+ D D EM +KFEEFV I ++PDPI+T KG+ SS+K+L++ G S + VKK GN W+GT+ LP+L + ITS+ GPGVPF GKVI F+ Sbjct: 4 RKMVMPSFKSLLLSFVLFQGVQSDTEKESREMGGFGGDFGQYMNML---DTRSFKPGKSDTKDNLKSRGGFGDSLSLRSFPGMGDGMIPGLGKRSFTTKRNGKDKIVRRKTLRF------FEVPSDKKRSSWDKYTSQSKRDQGSNQRRNSRSFGYRESGMGDFGGDYGKYMKMME----------DDQISENQDLQADVFGGGMSGKYWDIKGSMGGAGGDMERANDSDDDKNLRKS---------RQSLEEDQPE-DAANESRSSDDSSDTYIVAFKSPKEQIVSFYNELKTSMKNKDKMRVNALLDSLNTREL-SEEESLVVKKLRKIMIIEDDKINDHKVDDVDTTEM-QDKFEEFVDMIVKNVPDPIKTRKGIPSSFKSLSITGFSSMKVTGKVKKLLGNRWRGTISLPSLITTITSAPGPGVPFNGKVIGCFQ 411 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012812 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000012812 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000012812 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000012812 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000012812 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000012812 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000012812 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s977:147875..150905+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012812-695578 ID=EMLSAG00000012812-695578|Name=EMLSAG00000012812|organism=Lepeophtheirus salmonis|type=gene|length=3031bp|location=Sequence derived from alignment at LSalAtl2s977:147875..150905+ (Lepeophtheirus salmonis)back to top Add to Basket
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