EMLSAG00000012916, EMLSAG00000012916-695682 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012916 vs. C. finmarchicus
Match: gi|592913136|gb|GAXK01045239.1| (TSA: Calanus finmarchicus comp1872457_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 8.804e-1 Identity = 19/55 (34.55%), Postives = 28/55 (50.91%), Query Frame = 0 Query: 50 LSISTKEVSPEDIKTSDLESPRTLSDSSEVLINSI-PSNYSEEDIRRYLLTFTLF 103 S ST + D+ TS+ P S SS+V + S + EED R+ L+ T+F Sbjct: 92 CSWSTSMTALADLLTSNCTQPDLTSLSSQVWLQKTEGSGWVEEDCRKLLIILTMF 256
BLAST of EMLSAG00000012916 vs. L. salmonis peptides
Match: EMLSAP00000012916 (pep:novel supercontig:LSalAtl2s:LSalAtl2s9820:56:1612:-1 gene:EMLSAG00000012916 transcript:EMLSAT00000012916 description:"maker-LSalAtl2s9820-snap-gene-0.3") HSP 1 Score: 242.662 bits (618), Expect = 2.970e-83 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MKDTTEGAPSTPVEEEKDIKKLPELESSKVSKKKKKSKVPLPTEKDNDQLSISTKEVSPEDIKTSDLESPRTLSDSSEVLINSIPSNYSEEDIRRYLLTFTLFKGFDTARLSLIIQDILRKLKESPE 127 MKDTTEGAPSTPVEEEKDIKKLPELESSKVSKKKKKSKVPLPTEKDNDQLSISTKEVSPEDIKTSDLESPRTLSDSSEVLINSIPSNYSEEDIRRYLLTFTLFKGFDTARLSLIIQDILRKLKESPE Sbjct: 1 MKDTTEGAPSTPVEEEKDIKKLPELESSKVSKKKKKSKVPLPTEKDNDQLSISTKEVSPEDIKTSDLESPRTLSDSSEVLINSIPSNYSEEDIRRYLLTFTLFKGFDTARLSLIIQDILRKLKESPE 127
BLAST of EMLSAG00000012916 vs. L. salmonis peptides
Match: EMLSAP00000000883 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11531:93:1169:-1 gene:EMLSAG00000000883 transcript:EMLSAT00000000883 description:"snap_masked-LSalAtl2s11531-processed-gene-0.1") HSP 1 Score: 151.369 bits (381), Expect = 4.231e-46 Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 0 Query: 45 KDNDQLSISTKEVSPEDIKTSDLESPRTLSDSSEVLINSIPSNYSEEDIRRYLLTFTLFKGFDTARLSLIIQDILRKLKESPE 127 KDNDQ SISTKEVSPE+ KTSDLESPRTLSDS+EVLINSIPSNYSEEDIRRYLLTFT+FKGFDTARLSLIIQDIL+KLKESPE Sbjct: 60 KDNDQPSISTKEVSPEEHKTSDLESPRTLSDSNEVLINSIPSNYSEEDIRRYLLTFTMFKGFDTARLSLIIQDILQKLKESPE 142 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012916 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000012916 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000012916 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000012916 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000012916 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000012916 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000012916 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s9820:56..1612- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012916-695682 ID=EMLSAG00000012916-695682|Name=EMLSAG00000012916|organism=Lepeophtheirus salmonis|type=gene|length=1557bp|location=Sequence derived from alignment at LSalAtl2s9820:56..1612- (Lepeophtheirus salmonis)back to top Add to Basket
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