EMLSAG00000012965, EMLSAG00000012965-695731 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:Hr96 "Hormone receptor-like in 96" species:7227 "Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0070873 "regulation of glycogen metabolic process" evidence=IMP] [GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0042594 "response to starvation" evidence=IMP] [GO:0042632 "cholesterol homeostasis" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0004879 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042594 GO:GO:0042632 GO:GO:0070328 GO:GO:0000977 GO:GO:0070873 OrthoDB:EOG7G4QFJ EMBL:U36792 EMBL:AY051486 RefSeq:NP_524493.1 UniGene:Dm.1650 ProteinModelPortal:Q24143 SMR:Q24143 BioGrid:67914 DIP:DIP-20167N MINT:MINT-765036 STRING:7227.FBpp0084131 PRIDE:Q24143 EnsemblMetazoa:FBtr0084756 GeneID:42993 KEGG:dme:Dmel_CG11783 CTD:42993 FlyBase:FBgn0015240 eggNOG:NOG245868 GeneTree:ENSGT00740000116083 InParanoid:Q24143 KO:K14035 OMA:FMNTPAE PhylomeDB:Q24143 GenomeRNAi:42993 NextBio:831700 Bgee:Q24143 Uniprot:Q24143) HSP 1 Score: 57.3806 bits (137), Expect = 3.554e-7 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
N+NC +T TR+ CQ CR KCL +GMKS +M+EEDK K+ K + K +
Sbjct: 46 NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRR 98
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:vdrb "vitamin D receptor b" species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR000324 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-10 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0006366 GO:GO:0070561 GeneTree:ENSGT00720000108423 HOVERGEN:HBG108655 TreeFam:TF316304 HOGENOM:HOG000220844 KO:K08539 GO:GO:0008434 EMBL:EB970525 EMBL:DQ017633 RefSeq:NP_001153457.1 RefSeq:XP_005166104.1 UniGene:Dr.86291 ProteinModelPortal:Q1L673 SMR:Q1L673 STRING:7955.ENSDARP00000094891 Ensembl:ENSDART00000104116 Ensembl:ENSDART00000150885 GeneID:564511 KEGG:dre:564511 CTD:564511 eggNOG:NOG283526 InParanoid:Q1L673 OMA:FCQFRPP OrthoDB:EOG79KPF8 NextBio:20885416 PRO:PR:Q1L673 Bgee:Q1L673 Uniprot:Q1L673) HSP 1 Score: 55.8398 bits (133), Expect = 6.095e-7 Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFN 98
N +C +TK R+HCQ CR +CL +GM +++T+E+ + KKE I++ K + + HR + K + S + N
Sbjct: 62 NGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKE--LIQRRKDE--EAHREAQKPRLSDEQRN 129
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:rxrba "retinoid x receptor, beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634 GO:GO:0045892 eggNOG:NOG327099 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 HOVERGEN:HBG005606 TreeFam:TF352097 GeneTree:ENSGT00740000115010 EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483 PIR:I50517 RefSeq:NP_571350.1 RefSeq:XP_005159467.1 UniGene:Dr.351 ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:7955.ENSDARP00000015784 Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530 KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525 OMA:MGDSRDS NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5) HSP 1 Score: 55.8398 bits (133), Expect = 8.227e-7 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
+++S + DNK+C+V K R CQYCR+ KCL++GMK V E + ++E+
Sbjct: 155 KDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEER 207
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:rxraa "retinoid X receptor, alpha a" species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 TreeFam:TF352097 GeneTree:ENSGT00740000115010 InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:CU062650 EMBL:BX001031 RefSeq:XP_005161241.1 UniGene:Dr.87467 ProteinModelPortal:F1R1Y8 Ensembl:ENSDART00000124173 GeneID:555578 KEGG:dre:555578 CTD:555578 OMA:EHAVEPK ArrayExpress:F1R1Y8 Bgee:F1R1Y8 Uniprot:F1R1Y8) HSP 1 Score: 55.4546 bits (132), Expect = 9.013e-7 Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
++++ + DNK+CV+ K R CQYCR+ KCL++GMK V +E+++ KE++
Sbjct: 198 KDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAV--QEERQRAKERS 249
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:nhr-48 species:6239 "Caenorhabditis elegans" [GO:0048477 "oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 GO:GO:0043401 OrthoDB:EOG7G4QFJ eggNOG:NOG245868 GeneTree:ENSGT00740000116083 EMBL:Z79604 EMBL:AF332204 EMBL:AF332205 PIR:T27941 RefSeq:NP_001024998.1 RefSeq:NP_001024999.1 UniGene:Cel.626 ProteinModelPortal:Q94407 SMR:Q94407 BioGrid:46553 DIP:DIP-24311N IntAct:Q94407 MINT:MINT-1095080 PaxDb:Q94407 PRIDE:Q94407 EnsemblMetazoa:ZK662.3b GeneID:181661 KEGG:cel:CELE_ZK662.3 UCSC:ZK662.3b CTD:181661 WormBase:ZK662.3a WormBase:ZK662.3b HOGENOM:HOG000018249 InParanoid:Q94407 OMA:CSTAMEL NextBio:914860 Uniprot:Q94407) HSP 1 Score: 55.8398 bits (133), Expect = 9.932e-7 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
N+ C + +R+ CQ CR KC +VGMK W+M+EE + EKK++
Sbjct: 139 NEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIMSEEARLEKKQRV 183
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:nhr-48 "Nuclear hormone receptor family member nhr-48" species:6239 "Caenorhabditis elegans" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 GO:GO:0043401 OrthoDB:EOG7G4QFJ eggNOG:NOG245868 GeneTree:ENSGT00740000116083 EMBL:Z79604 EMBL:AF332204 EMBL:AF332205 PIR:T27941 RefSeq:NP_001024998.1 RefSeq:NP_001024999.1 UniGene:Cel.626 ProteinModelPortal:Q94407 SMR:Q94407 BioGrid:46553 DIP:DIP-24311N IntAct:Q94407 MINT:MINT-1095080 PaxDb:Q94407 PRIDE:Q94407 EnsemblMetazoa:ZK662.3b GeneID:181661 KEGG:cel:CELE_ZK662.3 UCSC:ZK662.3b CTD:181661 WormBase:ZK662.3a WormBase:ZK662.3b HOGENOM:HOG000018249 InParanoid:Q94407 OMA:CSTAMEL NextBio:914860 Uniprot:Q94407) HSP 1 Score: 55.8398 bits (133), Expect = 9.932e-7 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
N+ C + +R+ CQ CR KC +VGMK W+M+EE + EKK++
Sbjct: 139 NEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIMSEEARLEKKQRV 183
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:rxrab "retinoid x receptor, alpha b" species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity" evidence=ISS;IDA] [GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-243 GO:GO:0005634 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606 EMBL:U29894 PIR:I50514 RefSeq:NP_571228.1 UniGene:Dr.624 ProteinModelPortal:Q90415 SMR:Q90415 GeneID:793011 KEGG:dre:793011 CTD:793011 HOGENOM:HOG000260821 InParanoid:Q90415 NextBio:20931280 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 Uniprot:Q90415) HSP 1 Score: 54.6842 bits (130), Expect = 1.321e-6 Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK-KEKKEKAF 72
++++ + DNK+C++ K R CQYCR+ KCL++GMK V E + KE+ E F
Sbjct: 84 KDLTYTCRDNKDCMIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRAKERSEAEF 139
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:rxrbb "retinoid x receptor, beta b" species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0001034 "sequence-specific DNA binding RNA polymerase III transcription factor activity" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-242 GO:GO:0005634 GO:GO:0045892 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006383 GO:GO:0006359 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 EMBL:U29941 PIR:I50516 RefSeq:NP_571313.1 UniGene:Dr.350 ProteinModelPortal:Q90417 SMR:Q90417 GeneID:30486 KEGG:dre:30486 CTD:30486 NextBio:20806878 Uniprot:Q90417) HSP 1 Score: 54.6842 bits (130), Expect = 1.500e-6 Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAF 72
+++S + DNK C+V K R CQYCR+ KCL++GMK V E K ++++ +
Sbjct: 120 KDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQKNKERDGDY 174
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:VDR "Vitamin D3 receptor" species:9606 "Homo sapiens" [GO:0001501 "skeletal system development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0050892 "intestinal absorption" evidence=IEA] [GO:0060058 "positive regulation of apoptotic process involved in mammary gland involution" evidence=IEA] [GO:0060558 "regulation of calcidiol 1-monooxygenase activity" evidence=IEA] [GO:0060745 "mammary gland branching involved in pregnancy" evidence=IEA] InterPro:IPR000324 InterPro:IPR001628 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00350 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0006357 GO:GO:0009887 GO:GO:0006366 GO:GO:0001501 GO:GO:0006816 GO:GO:0006874 GO:GO:0050892 GO:GO:0007595 GO:GO:0060058 GO:GO:0070561 GO:GO:0060745 EMBL:AC004466 GO:GO:0008434 GO:GO:0060558 EMBL:AC121338 HGNC:HGNC:12679 ChiTaRS:VDR ProteinModelPortal:F8VVY8 SMR:F8VVY8 Ensembl:ENST00000550314 NextBio:35511855 ArrayExpress:F8VVY8 Bgee:F8VVY8 Uniprot:F8VVY8) HSP 1 Score: 51.6026 bits (122), Expect = 1.610e-6 Identity = 17/43 (39.53%), Postives = 30/43 (69.77%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKE 69
N +C +TK R+HCQ CR +C+ +GM +++T+E+ + K+E
Sbjct: 63 NGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 105
BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:vdra "vitamin D receptor a" species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0005499 "vitamin D binding" evidence=IDA] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISS;IDA] [GO:0030522 "intracellular receptor signaling pathway" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=IMP] [GO:0001503 "ossification" evidence=IMP] [GO:0006351 "transcription, DNA-templated" evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008134 "transcription factor binding" evidence=IPI] InterPro:IPR000324 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-000210-31 GO:GO:0005634 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0055074 GO:GO:0001503 GO:GO:0005499 GO:GO:0070561 PDB:2HBH PDB:2HC4 PDB:2HCD PDB:3DR1 PDB:4G1D PDB:4G1Y PDB:4G1Z PDB:4G20 PDB:4G21 PDB:4G2H PDBsum:2HBH PDBsum:2HC4 PDBsum:2HCD PDBsum:3DR1 PDBsum:4G1D PDBsum:4G1Y PDBsum:4G1Z PDBsum:4G20 PDBsum:4G21 PDBsum:4G2H PDB:3O1D PDB:3O1E PDB:4FHH PDB:4FHI PDB:4IA1 PDB:4IA2 PDB:4IA3 PDB:4IA7 PDBsum:3O1D PDBsum:3O1E PDBsum:4FHH PDBsum:4FHI PDBsum:4IA1 PDBsum:4IA2 PDBsum:4IA3 PDBsum:4IA7 HOVERGEN:HBG108655 EMBL:AF164512 EMBL:BC162213 EMBL:BC162226 RefSeq:NP_570994.1 UniGene:Dr.81313 BioGrid:78317 PRIDE:Q9PTN2 GeneID:30076 KEGG:dre:30076 CTD:30076 KO:K08539 EvolutionaryTrace:Q9PTN2 NextBio:20806561 GO:GO:0008434 Uniprot:Q9PTN2) HSP 1 Score: 54.299 bits (129), Expect = 2.076e-6 Identity = 19/49 (38.78%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
N NC +TK R+HCQ CR +C+ +GM +++T+E+ + KK+ +K
Sbjct: 95 NGNCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKKDLIMKRK 143
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592876291|gb|GAXK01081286.1| (TSA: Calanus finmarchicus comp1041760_c0_seq1 transcribed RNA sequence) HSP 1 Score: 108.997 bits (271), Expect = 6.289e-24 Identity = 66/213 (30.99%), Postives = 113/213 (53.05%), Query Frame = 0
Query: 421 MINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFF------------QHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
M + ++S T ++ GY +++I + +D F+ +ED+K LLL N D + NI++A FF V KH+ N P M Q F++PWA + E EKKY L+ + +L+LDE + L+ +++LF++ A + + + + QE F L+ +++I G++AA + PKYI M++HL EMA +M + L +
Sbjct: 1280 MFDKAFSFLTMDYELIFWGYTFAIKKITWFAQAIDEFSVCEIEDKKTLLLQNLDPMFNIKSAMFFLSQSENLFEQLRNFCVFDTKHLISAENALTAPP---MKWNQFFRTPWANNLEHEKKYEILLAQAKELELDERAGCLLQVVALFANDGAVLKTKEQVERLQENFCILLFRFLIDRDGEEAAAEKFPKYISMLSHLREMADIMRNQTLKL 1909 HSP 2 Score: 45.8246 bits (107), Expect = 4.309e-4 Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 0
Query: 29 NCVVTKHTRKHCQYCRFVKCLSVGM 53
NC++T +TRK CQYCRF KC +VGM
Sbjct: 458 NCMITVNTRKKCQYCRFKKCKAVGM 532
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592835469|gb|GAXK01122075.1| (TSA: Calanus finmarchicus comp107343_c0_seq1 transcribed RNA sequence) HSP 1 Score: 108.227 bits (269), Expect = 1.459e-23 Identity = 63/225 (28.00%), Postives = 104/225 (46.22%), Query Frame = 0
Query: 411 IPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYG------------RMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKT----QEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
+P+ ++CS S Q + Y C++RI++ ++ L F +D + LL++NT I+NIR AR+F K I D K ++ +F SPW C E +Y L+ +I L LD VL+S+M LF S ++L A T F+ L+++Y++ +GK+ + KY + L EMA++++ KRL
Sbjct: 211 VPMEVSHGRSFLDCSVSGNHISQITIMHAYQTCIKRIVRFANSLQDFVELPPDDMQKLLVSNTVSIINIRIARWFHPKTDLKTQISLCGTGQDLFKDAMQEGKLSEGTPLKVGYDDVFSSPWCCDSSHEDRYETLISQIHQLDLDSTVVVLLSVMCLFDSEQV---EDLSAKSTIISHGRKFSLLLQRYLVESIGKEKTAECFVKYREALQKLREMAEILINKRL 876 HSP 2 Score: 56.225 bits (134), Expect = 2.449e-7 Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0
Query: 29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
NC + K TRK CQ+CRF KC +VGMK+SWV+T
Sbjct: 2059 NCKINKDTRKRCQFCRFEKCKAVGMKTSWVLT 2154
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592782594|gb|GAXK01171974.1| (TSA: Calanus finmarchicus comp62776_c0_seq1 transcribed RNA sequence) HSP 1 Score: 97.8265 bits (242), Expect = 3.402e-20 Identity = 65/246 (26.42%), Postives = 111/246 (45.12%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDT------------FQIFQSPWACSD-EDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
F+ E N + ++ +E + + E + MI CS + GY + + RI +++ LD FT DQ LL N D++VN+R A FF + DD M T ++ F S A ++ E +YN L K+ DL D+I+T+LI+ + LFS + D R +TQ+ + ++++YI + AC +L + + + L EMA + + +N+
Sbjct: 607 FTTAEYNQLEQLVKDHDERYRSVNFGEELIKEMIMCSMFGIPVSTSAAINGYRLSVERITRIAHNLDCFTDLPKNDQNNLLKENADLLVNLRGAIFFDSKKKGVDQVLISMGIDDLQTIKTMFTPLLKENSMKHIDYKTFNSIQAVANPATESRYNFLQTKVADLITDDITTILITYIVLFSVDFCPLLDRRRVERTQDVYIRMLERYIYSKTSRKIACSVLARTLNAVTCLREMADIKKSRAINL 1344 HSP 2 Score: 53.1434 bits (126), Expect = 2.516e-6 Identity = 17/33 (51.52%), Postives = 28/33 (84.85%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
KNC + TRK+CQ+CR+++C++VGMK +WV++
Sbjct: 2587 KNCEINLKTRKNCQFCRYMRCIAVGMKPTWVLS 2685
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850976|gb|GAXK01106568.1| (TSA: Calanus finmarchicus comp119035_c1_seq5 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 6.464e-17 Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
F++ E + ++ S +E + + E + MI CS + GY + + RI ++++ +D F + DQ +LL N D++V++R A FF + DD + K +D ++IF S ++ EK+YN L K+ + D+I T+L++ + LFS + D R + QE F ++++Y+ G+ AC L + + + EMA + + +N
Sbjct: 54 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 791 HSP 2 Score: 52.7582 bits (125), Expect = 3.075e-6 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+C + TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 1743 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 1841
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850977|gb|GAXK01106567.1| (TSA: Calanus finmarchicus comp119035_c1_seq4 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 7.289e-17 Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
F++ E + ++ S +E + + E + MI CS + GY + + RI ++++ +D F + DQ +LL N D++V++R A FF + DD + K +D ++IF S ++ EK+YN L K+ + D+I T+L++ + LFS + D R + QE F ++++Y+ G+ AC L + + + EMA + + +N
Sbjct: 536 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1273 HSP 2 Score: 52.7582 bits (125), Expect = 3.247e-6 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+C + TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2225 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2323
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850985|gb|GAXK01106559.1| (TSA: Calanus finmarchicus comp119035_c0_seq1 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 7.429e-17 Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
F++ E + ++ S +E + + E + MI CS + GY + + RI ++++ +D F + DQ +LL N D++V++R A FF + DD + K +D ++IF S ++ EK+YN L K+ + D+I T+L++ + LFS + D R + QE F ++++Y+ G+ AC L + + + EMA + + +N
Sbjct: 1608 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 2345 HSP 2 Score: 52.7582 bits (125), Expect = 3.276e-6 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+C + TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 558 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 656
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850978|gb|GAXK01106566.1| (TSA: Calanus finmarchicus comp119035_c1_seq3 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 7.449e-17 Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
F++ E + ++ S +E + + E + MI CS + GY + + RI ++++ +D F + DQ +LL N D++V++R A FF + DD + K +D ++IF S ++ EK+YN L K+ + D+I T+L++ + LFS + D R + QE F ++++Y+ G+ AC L + + + EMA + + +N
Sbjct: 655 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1392 HSP 2 Score: 52.7582 bits (125), Expect = 3.280e-6 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+C + TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2344 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2442
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850979|gb|GAXK01106565.1| (TSA: Calanus finmarchicus comp119035_c1_seq2 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 7.611e-17 Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
F++ E + ++ S +E + + E + MI CS + GY + + RI ++++ +D F + DQ +LL N D++V++R A FF + DD + K +D ++IF S ++ EK+YN L K+ + D+I T+L++ + LFS + D R + QE F ++++Y+ G+ AC L + + + EMA + + +N
Sbjct: 783 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1520 HSP 2 Score: 52.7582 bits (125), Expect = 3.314e-6 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+C + TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2472 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2570
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850980|gb|GAXK01106564.1| (TSA: Calanus finmarchicus comp119035_c1_seq1 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 7.926e-17 Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
F++ E + ++ S +E + + E + MI CS + GY + + RI ++++ +D F + DQ +LL N D++V++R A FF + DD + K +D ++IF S ++ EK+YN L K+ + D+I T+L++ + LFS + D R + QE F ++++Y+ G+ AC L + + + EMA + + +N
Sbjct: 1067 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1804 HSP 2 Score: 52.7582 bits (125), Expect = 3.380e-6 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+C + TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2756 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2854
BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592857768|gb|GAXK01099794.1| (TSA: Calanus finmarchicus comp253537_c2_seq2 transcribed RNA sequence) HSP 1 Score: 68.1662 bits (165), Expect = 5.477e-11 Identity = 50/219 (22.83%), Postives = 93/219 (42.47%), Query Frame = 0
Query: 421 MINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWA-------------------CSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
M+ CS ++GY + + RI ++++ L FT DQ ALL N D++V++R A FF + +D M+T +I P + + E+ Y+ L K+ D LD I+T+L++ + LFSS + D +TQ + ++++ + + AC + + + + EMA + + +N
Sbjct: 502 MLMCSMFGVAMSTSAAIQGYRLQVERITRIANSLKCFTNLQKADQVALLKENADLLVSLRGAIFFDKKKKGVDQVMSSMGIED------METIKILFKPLIQTHKMNHIDYLVFNSIQDPATKKTEEWYSFLQGKVADSILDNIATILMTYIILFSSDFCSLEDRRLVERTQHHYLRILERCLYGASSRMKACSKMASLLNAVTCVREMADIKKCRTIN 1140 HSP 2 Score: 44.2838 bits (103), Expect = 1.369e-3 Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 0
Query: 30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
C + TRK+CQYCR++KCL VGM ++V++
Sbjct: 1936 CEMNIKTRKNCQYCRYMKCLDVGMNPNYVLS 2028
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000012965 (pep:novel supercontig:LSalAtl2s:LSalAtl2s98:1224628:1226761:1 gene:EMLSAG00000012965 transcript:EMLSAT00000012965 description:"snap_masked-LSalAtl2s98-processed-gene-12.8") HSP 1 Score: 1278.08 bits (3306), Expect = 0.000e+0 Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0
Query: 1 MLTRKQSNQLSWAHLQSEEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFTFSSASSPYSSMNRSLSCSPITMSNNTDALLSTHHSPREHSEFPGSPIVGTLSYGQSMNSSPIYKYLNTIWSSSLQNHLYNNGRSNELSPPSKQSHISNTYALNPEISMSNQSYYNFNSTLRQKDPLEPPSISQSNYSPKNNHGELFSYSPLSGKSSPQPAKTEKIPPSLCKKFMDNETLPELLVNSNFPIDLSQKYTSVVDSCNYKIHPSEILTNLSTVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
MLTRKQSNQLSWAHLQSEEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFTFSSASSPYSSMNRSLSCSPITMSNNTDALLSTHHSPREHSEFPGSPIVGTLSYGQSMNSSPIYKYLNTIWSSSLQNHLYNNGRSNELSPPSKQSHISNTYALNPEISMSNQSYYNFNSTLRQKDPLEPPSISQSNYSPKNNHGELFSYSPLSGKSSPQPAKTEKIPPSLCKKFMDNETLPELLVNSNFPIDLSQKYTSVVDSCNYKIHPSEILTNLSTVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI
Sbjct: 1 MLTRKQSNQLSWAHLQSEEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFTFSSASSPYSSMNRSLSCSPITMSNNTDALLSTHHSPREHSEFPGSPIVGTLSYGQSMNSSPIYKYLNTIWSSSLQNHLYNNGRSNELSPPSKQSHISNTYALNPEISMSNQSYYNFNSTLRQKDPLEPPSISQSNYSPKNNHGELFSYSPLSGKSSPQPAKTEKIPPSLCKKFMDNETLPELLVNSNFPIDLSQKYTSVVDSCNYKIHPSEILTNLSTVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000008261 (pep:novel supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 152.14 bits (383), Expect = 4.521e-40 Identity = 86/240 (35.83%), Postives = 137/240 (57.08%), Query Frame = 0
Query: 389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPK--------YGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELR-ANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
F+ E +L+ ++ E ES K IPL S M + S N+ P ++ L GY C++RI + ++FF S EDQK LLL N DM+VNI+TAR+ + + +N ++ K + +IF++PW S ED+ +Y LMK IFDL++DEI+ +L+ +++FS+TN D + + Q+ F++L+ KY+ +G + L PKYI ++A LEEMA+ ++ KRL
Sbjct: 235 FNKMEIHLVQEMLYWEIESRKKIPLNSVNMKSFMEYSQLNEPIPFEISLSGYNTCVQRITMFMTKINFFAALSPEDQKKLLLNNVDMVVNIKTARYLHPNNNITEQFEIINGKNNSEKSCTTSPATSNNVYYQEIFKNPWCSSFEDKTQYKALMKAIFDLEMDEITIILLIGLTIFSTTNCVDLDNINLIMRFQDVFSHLLYKYLCSTIGNSSTFLLFPKYINILAQLEEMAKTILNKRL 474 HSP 2 Score: 60.4622 bits (145), Expect = 6.441e-10 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVK 77
+K C +TK TRKHCQ+CRF KCL GMK++WVM+E +K+EKKEK +KK+K
Sbjct: 103 DKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLK 153
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000012964 (pep:novel supercontig:LSalAtl2s:LSalAtl2s98:1204108:1205793:-1 gene:EMLSAG00000012964 transcript:EMLSAT00000012964 description:"snap_masked-LSalAtl2s98-processed-gene-12.16") HSP 1 Score: 79.337 bits (194), Expect = 6.157e-18 Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0
Query: 22 KSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
K+ NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT
Sbjct: 9 KTNGKNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 47
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000012651 (pep:novel supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 60.8474 bits (146), Expect = 5.211e-10 Identity = 53/205 (25.85%), Postives = 96/205 (46.83%), Query Frame = 0
Query: 389 FSDYECNLISNIMISEEESSKLIP---LRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFF-QHGVHFKKHIFFVNNTDDDPKYGRMDTF-----QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYI 584
F+ E I N++ +++ + LIP L + + M N S N T E Y V R+ + ++ +D F + +D+K LL N D + +RT F + G + NT P YG + + ++F+ PWA S+E + + +KI L L E + +L+ +++LFS + + + + + QE L +Y+
Sbjct: 245 FTTEEXRHIDNLIFAQDSTRNLIPMPELVMDEILEMTNISSLNMT--SKGITEIYRVIYSRVAKFATYIDHFEELTSDDKKLLLSKNMDSMAILRTVVCFNKDGT--GNLTSQLKNTGS-PIYGNVGPYYISVERVFRHPWAKSEEHRHLFKETFRKIASLGLGEKAAMLLQLVTLFSVLDLPVQERNKIEQFQEQMALLCYRYL 444 HSP 2 Score: 58.9214 bits (141), Expect = 2.083e-9 Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTC 81
++ C++T TRK+CQ+CR+ KCL GMK SWV++EE+K + +++K K TC
Sbjct: 131 DQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRKNK-TTC 184
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000011907 (pep:novel supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 56.9954 bits (136), Expect = 8.948e-9 Identity = 28/88 (31.82%), Postives = 49/88 (55.68%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK-----------AFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSI 104
++C++ TRK CQ CRF KC+S GM++SWV+ + +++ KK +F L + ++ V T + K ++SF + NS+
Sbjct: 150 EDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILNNNTPLLPSFDDPGGLTSLEVSFVFTINNKLRKSFFDNVNSM 237
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000010267 (pep:novel supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 56.225 bits (134), Expect = 1.595e-8 Identity = 33/111 (29.73%), Postives = 55/111 (49.55%), Query Frame = 0
Query: 28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVK-----------LKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTS-SSSLRVPTLSEH 126
K+C++ TRK CQ CRF KC+S GM+ SWV + +++ KK + K L + ++ V T + ++F + N++ K D++ L PT SE+
Sbjct: 151 KDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNKPPLPSFNDPEGLTSIEVSIVFTINNNLHKNFLDNLNTMVKRDSDFLIDFVDYLAFPTRSEY 261
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000004174 (pep:novel supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 54.299 bits (129), Expect = 7.136e-8 Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 25 DDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK 64
D++ C++TK TR HCQ+CR+ CLS GM S+V T E++
Sbjct: 182 DESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000001919 (pep:novel supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 51.9878 bits (123), Expect = 3.407e-7 Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK 64
+E++ + +N++CV+ K R CQYCR++KCL GMK V E +
Sbjct: 121 KELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHR 167
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|2500907|sp|Q24143.1|HR96_DROME (RecName: Full=Nuclear hormone receptor HR96; Short=dHR96; AltName: Full=Nuclear receptor subfamily 1 group J member 1) HSP 1 Score: 57.3806 bits (137), Expect = 2.787e-7 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
N+NC +T TR+ CQ CR KCL +GMKS +M+EEDK K+ K + K +
Sbjct: 46 NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRR 98
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|74902124|sp|Q5I7G2.1|RXR_LYMST (RecName: Full=Retinoic acid receptor RXR; AltName: Full=Retinoid X receptor; Short=LymRXR) HSP 1 Score: 56.6102 bits (135), Expect = 3.183e-7 Identity = 23/54 (42.59%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
++++ + D+KNC++ K R CQYCR++KCLS+GMK V +E+++ KEK
Sbjct: 147 KDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAV--QEERQRVKEKG 198
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|75017953|sp|Q8T5C6.1|RXR_BIOGL (RecName: Full=Retinoic acid receptor RXR; AltName: Full=RXR-like protein; AltName: Full=Retinoid X receptor; Short=BgRXR) HSP 1 Score: 56.6102 bits (135), Expect = 3.443e-7 Identity = 23/54 (42.59%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
++++ + D+KNC++ K R CQYCR++KCLS+GMK V +E+++ KEK
Sbjct: 147 KDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAV--QEERQRVKEKG 198
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|190411624|sp|Q1L673.2|VDRB_DANRE (RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName: Full=1,25-dihydroxyvitamin D3 receptor B; AltName: Full=Nuclear receptor subfamily 1 group I member 1-B) HSP 1 Score: 55.8398 bits (133), Expect = 4.769e-7 Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFN 98
N +C +TK R+HCQ CR +CL +GM +++T+E+ + KKE I++ K + + HR + K + S + N
Sbjct: 62 NGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKE--LIQRRKDE--EAHREAQKPRLSDEQRN 129
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A) HSP 1 Score: 55.8398 bits (133), Expect = 6.451e-7 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
+++S + DNK+C+V K R CQYCR+ KCL++GMK V E + ++E+
Sbjct: 155 KDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEER 207
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|147732610|sp|A2T929.2|RXRAA_DANRE (RecName: Full=Retinoic acid receptor RXR-alpha-A; AltName: Full=Nuclear receptor subfamily 2 group B member 1-A; AltName: Full=RXRalpha-B; AltName: Full=Retinoid X receptor alpha-A) HSP 1 Score: 55.4546 bits (132), Expect = 6.486e-7 Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
++++ + DNK+CV+ K R CQYCR+ KCL++GMK V +E+++ KE++
Sbjct: 133 KDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAV--QEERQRAKERS 184
BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|114152848|sp|Q94407.3|NHR48_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-48) HSP 1 Score: 55.8398 bits (133), Expect = 7.790e-7 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
N+ C + +R+ CQ CR KC +VGMK W+M+EE + EKK++
Sbjct: 139 NEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIMSEEARLEKKQRV 183
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: EFX79885.1 (hypothetical protein DAPPUDRAFT_304351 [Daphnia pulex]) HSP 1 Score: 65.0846 bits (157), Expect = 4.473e-10 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIK-KVKLKTCQLH-RVSTKSKKSQQSFNKHTNSIKKEDNNG 111
CV++ RK CQYCR +C ++GM+ SWVMTEE++ KA +K + + K+C+ VST S S Q+ N +NS + + G
Sbjct: 93 CVISLSNRKSCQYCRMKRCFAIGMEKSWVMTEEER-----KALMKARAEKKSCKRSPTVSTSSNASAQNLNTSSNSSGGDQSPG 171
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: gb|KFM66780.1| (Vitamin D3 receptor B, partial [Stegodyphus mimosarum]) HSP 1 Score: 58.5362 bits (140), Expect = 3.871e-8 Identity = 59/240 (24.58%), Postives = 101/240 (42.08%), Query Frame = 0
Query: 371 STVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEM 610
++ S+YE I K G D I ++ + E S +P SE + + + S +T L+ + +++ S LD F+ DQ+ LL T + IR A + + HI P Y T S E K+ + ++ I +L DE +T+L+ ++ L S + +E+ + QE F LMKKY++ G++ L PK + + L E+
Sbjct: 175 TSFSEYEPDINDLPKYLGPEDM--RTIETLVNAYEASYTEVPF-SEHLHKVGSASGRTRT----EILDMFFTTVKQFTNFSQRLDTFSKIQQHDQEILLRTGVLELCFIRGAYVYDEKLSRWPHI-------GKPMYRDSPTLDAEDIKKLVSPELFTKHMEFIRSIKELHPDEATTMLLLVIVLLSPDRPGLENEVLVAEEQEKFYILMKKYMLWRYGEENTLILYPKLLLRLPDLREL 400 HSP 2 Score: 58.151 bits (139), Expect = 5.340e-8 Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 0
Query: 30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK 64
C +T +RK CQYCRF KCLS+GM++ WVMTEE++
Sbjct: 107 CEITITSRKCCQYCRFKKCLSIGMETGWVMTEEER 141
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: gb|KFM75069.1| (Nuclear hormone receptor HR96, partial [Stegodyphus mimosarum]) HSP 1 Score: 57.7658 bits (138), Expect = 8.710e-8 Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
Query: 29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
NC V TR+ CQ CR KC ++GMK W+M+EE+KK K++K
Sbjct: 54 NCKVDMVTRRFCQKCRLKKCFAIGMKKEWIMSEEEKKAKRDK 95
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: gb|EEC00893.1| (retinoid X receptor, putative, partial [Ixodes scapularis]) HSP 1 Score: 57.3806 bits (137), Expect = 9.082e-8 Identity = 20/42 (47.62%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
C +T +RK CQ CRF KCLS+GM++SWVM+E++++ + ++
Sbjct: 131 RCHITLTSRKSCQACRFAKCLSIGMEASWVMSEQERRARMQQ 172
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: EEB17317.1 (nuclear receptor nhr-48, putative [Pediculus humanus corporis]) HSP 1 Score: 57.3806 bits (137), Expect = 1.036e-7 Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
NK C++ TR+ CQ CR +KC +GM+ ++M+E+DK EK++K
Sbjct: 86 NKKCIINPVTRRFCQLCRLIKCFEIGMRKEYIMSEDDKLEKRKK 129
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: AAF56379.1 (hormone receptor-like in 96 [Drosophila melanogaster]) HSP 1 Score: 57.3806 bits (137), Expect = 1.351e-7 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
N+NC +T TR+ CQ CR KCL +GMKS +M+EEDK K+ K + K +
Sbjct: 46 NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRR 98
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: EAA08573.6 (AGAP004224-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 56.225 bits (134), Expect = 3.489e-7 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
N+NC +T TR+ CQ CR KC +GMK ++M+EEDK K++K
Sbjct: 75 NENCDITIVTRRFCQKCRLEKCFRIGMKKEYIMSEEDKVLKRKK 118
BLAST of EMLSAG00000012965 vs. nr
Match: gi|657600354|gb|AID52838.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 199.904 bits (507), Expect = 8.064e-53 Identity = 100/246 (40.65%), Postives = 150/246 (60.98%), Query Frame = 0
Query: 389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKY----GRMDTFQ---------IFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
F+ E L+ NI+ +E +++ IP+ E + MI + + P +EGY CMRRIIQ S LDFF F + DQ+ LLL NTDMIVN+R+AR + G++ + I N+ P MD FQ IFQSPWAC ++ E ++ LM+ +F L++D +T L++M+ LFS++ A++ D RA + QEFFT L+ +Y+ +G+ A +LLPKY+ +I+ LEEM+Q+M+ KRL I
Sbjct: 318 FTSEETFLVENIINTEVATTQSIPVNPEVLMGMIEAAKNGTVIPYSALVEGYTTCMRRIIQFVSKLDFFQSFVLPDQRDLLLHNTDMIVNLRSARLLRPGINLQAQI---NHATGGPSLENTTTSMDLFQCPERLEYKQIFQSPWACDEKHEAQFASLMENLFHLEMDRTTTTLMAMIVLFSTSYAELKDSHRAVQNQEFFTQLLYRYLGSMIGRKNAIKLLPKYMHLISQLEEMSQIMIAKRLTI 560 HSP 2 Score: 70.4774 bits (171), Expect = 3.899e-9 Identity = 36/50 (72.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKV 76
+K+C +TKHTRKHCQYCRF KC+++GM++SWVMTEEDK+EKKEKA +K+V
Sbjct: 102 SKSCPITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKQEKKEKARLKRV 151
BLAST of EMLSAG00000012965 vs. nr
Match: gi|657600364|gb|AID52843.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 120.168 bits (300), Expect = 2.333e-25 Identity = 61/231 (26.41%), Postives = 119/231 (51.52%), Query Frame = 0
Query: 393 ECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYG----RMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
E + ++++ E + IP+R ET+ + + P D C++G+ C++RI + S LDFF+ DQ+ LL NT M+VN+++AR + + + N T + R+ Q F SPW CS + E++Y LM ++F+L +D++++VL+ +M++ + ++ + + + +F+ L+ K++ G+ K + L EMA ++ +RL
Sbjct: 244 EKTFLEDLVLKEAACRREIPIRQETLIKFMESAKHETIIPYDACVDGFSTCVQRISKFMSRLDFFSSLMWSDQQILLRCNTHMVVNLKSARMLKPTNSLQGQLCLTNGTQPNQAISASPNRLTYSQFFNSPWCCSADKEEEYKKLMDELFNLDMDDVTSVLMMIMTMLAPPTEELIQSNQVSSRRSYFSQLLYKHLYSVKGEQLGRVSFQKCTQFLDKLREMAHILKQERL 474 HSP 2 Score: 72.7886 bits (177), Expect = 6.057e-10 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
N C VTK TRKHCQ CRF KC+ +GMK SWVMTE+++K+ + K KK++L+
Sbjct: 100 NSKCPVTKETRKHCQSCRFKKCIDIGMKPSWVMTEDERKDNRAKILKKKMELR 152
BLAST of EMLSAG00000012965 vs. nr
Match: gi|321468902|gb|EFX79885.1| (hypothetical protein DAPPUDRAFT_304351 [Daphnia pulex]) HSP 1 Score: 65.0846 bits (157), Expect = 2.188e-7 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIK-KVKLKTCQLH-RVSTKSKKSQQSFNKHTNSIKKEDNNG 111
CV++ RK CQYCR +C ++GM+ SWVMTEE++ KA +K + + K+C+ VST S S Q+ N +NS + + G
Sbjct: 93 CVISLSNRKSCQYCRMKRCFAIGMEKSWVMTEEER-----KALMKARAEKKSCKRSPTVSTSSNASAQNLNTSSNSSGGDQSPG 171
BLAST of EMLSAG00000012965 vs. nr
Match: gi|358342639|dbj|GAA50061.1| (nuclear receptor subfamily 1 group I [Clonorchis sinensis]) HSP 1 Score: 63.5438 bits (153), Expect = 5.330e-7 Identity = 44/151 (29.14%), Postives = 78/151 (51.66%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNG---TTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFT---FSSASSPYSSMNRSLSC 171
N+ C +T TR+ C +CR KC + GMKSS ++ ++ K+E+ EK K + +T L+ +S ++ + ++ ++ +D N T SS+ V T + P +P+ LSS++ S+ N ++F + +S S MN L C
Sbjct: 49 NEKCTITVATRRFCSHCRLKKCFAAGMKSSLILDDKAKQERHEK-IAKNRQARTDPLYPISKPGLDTKTAVASNSGNLFLQDTNAGETATDSSTSAVETFERLLSPDAQEPNVLSSNM--SYTNDQWRTFLEIPTEADASHVSDMNDRLYC 196
BLAST of EMLSAG00000012965 vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 63.5438 bits (153), Expect = 6.003e-7 Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0
Query: 29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
NCVVT TRK+CQ CRF KC+ GMK+SWV+++E+K E+ EK +K
Sbjct: 164 NCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRK 210
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold2498_size15023-processed-gene-0.1 (protein:Tk12056 transcript:snap_masked-scaffold2498_size15023-processed-gene-0.1-mRNA-1 annotation:"vitamin d3 receptor b-like") HSP 1 Score: 206.453 bits (524), Expect = 6.114e-59 Identity = 101/243 (41.56%), Postives = 148/243 (60.91%), Query Frame = 0
Query: 389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-DPKYGRMDTF---------QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
F+ E L+ NIM +E +++ IP+ E + MI+ + P +EGY +CMRRIIQ S LDFF FS+ DQ++LLL NTDMIVNIR+AR + G++ + + +P MD F QIFQSPWAC E ++ LM+ +F L++D +T L+SM+ LFS++ + D RA + QEFF+ L+ +Y+ +G+ A QLLPKY+ MI+ LEEM+Q+M+ KRL +
Sbjct: 336 FTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578 HSP 2 Score: 73.9442 bits (180), Expect = 4.787e-14 Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKV 76
NK+C +TKHTRKHCQYCRF KC+++GM++SWVMTEEDK+EKKEKA IK+V
Sbjct: 114 NKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRV 163
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1268_size51707-processed-gene-0.2 (protein:Tk07212 transcript:snap_masked-scaffold1268_size51707-processed-gene-0.2-mRNA-1 annotation:"vitamin d3 receptor b-like") HSP 1 Score: 206.453 bits (524), Expect = 6.114e-59 Identity = 101/243 (41.56%), Postives = 148/243 (60.91%), Query Frame = 0
Query: 389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-DPKYGRMDTF---------QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
F+ E L+ NIM +E +++ IP+ E + MI+ + P +EGY +CMRRIIQ S LDFF FS+ DQ++LLL NTDMIVNIR+AR + G++ + + +P MD F QIFQSPWAC E ++ LM+ +F L++D +T L+SM+ LFS++ + D RA + QEFF+ L+ +Y+ +G+ A QLLPKY+ MI+ LEEM+Q+M+ KRL +
Sbjct: 336 FTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578 HSP 2 Score: 73.9442 bits (180), Expect = 4.787e-14 Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKV 76
NK+C +TKHTRKHCQYCRF KC+++GM++SWVMTEEDK+EKKEKA IK+V
Sbjct: 114 NKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRV 163
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold323_size206388-snap-gene-1.16 (protein:Tk12478 transcript:maker-scaffold323_size206388-snap-gene-1.16-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_304351") HSP 1 Score: 140.584 bits (353), Expect = 3.797e-36 Identity = 71/247 (28.74%), Postives = 133/247 (53.85%), Query Frame = 0
Query: 379 GIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNT------DDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
G P L+ S +E + ++++ E K IPLR ET+ I+ + + P D C++G+ C++RI + LDFF+ DQ+ LL NT M+VN+++AR + F+ + N + GR++ QIF SPW CS + E +Y DLM+++F+L++D+I++VL+ +M++ + N ++ + + +F+ L+ +Y+ G+ + +A L++MA ++ +RL
Sbjct: 223 GTPNVLQTQPTS-HEHTFLHDLVLKEATCRKEIPLRQETLMKFIDSAKNGTIIPYDACVDGFSTCVQRISKFMGRLDFFSSLMWSDQQILLRCNTHMVVNLKSARMLKPSNDFQGQLCLTNGSQPHNTNGQQSSKGRLNYSQIFNSPWCCSADKEDEYKDLMEELFNLEMDDITSVLMMIMTILAPPNEELIQSSQVASRRTYFSQLLYRYLQSSRGEQEGRVTFQRCTQFLAKLKDMATILKQERL 468 HSP 2 Score: 72.7886 bits (177), Expect = 9.153e-14 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
N C VTK TRKHCQ CRF KC+ +GMK SWVMTE+++K+ + K KK++L+
Sbjct: 95 NSKCPVTKETRKHCQSCRFSKCVDIGMKPSWVMTEDERKDNRAKILKKKMELR 147
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold187_size272365-snap-gene-0.15 (protein:Tk10312 transcript:maker-scaffold187_size272365-snap-gene-0.15-mRNA-1 annotation:"nuclear receptor") HSP 1 Score: 82.4185 bits (202), Expect = 3.331e-17 Identity = 58/211 (27.49%), Postives = 104/211 (49.29%), Query Frame = 0
Query: 422 INCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQ-HGVHFKKH-----IFFVNNTDD-----DPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLF--SSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
I+ +YS Y +R++ + + ++ F + D+K LLL N D + NIR FF + +F V+N P+ G + Q F +PWA S++ E+K+ LM +I DL LD+ + +++++SLF TN H ++ A K Q+ + L+ +Y+ H G+ A ++ M+ +L+EM+ +M K +
Sbjct: 98 IHSAYSQTPLDFTAICWAYTKSIRKLTRFAQNVEDFNALEVHDRKLLLLENLDPMFNIRVGHFFNCDATNLLDQLECLAVFDVSNLKSYIGGWIPEVGPLHWNQFFVTPWANSEQHERKFEGLMSEIKDLGLDKSTATILTVVSLFCPEGTNTFKHPDVVA-KMQQKYIGLLFRYLCHTRGRSEAELKFSSFLSMMGNLKEMSDIMKNKTI 307
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold267_size230776-snap-gene-1.25 (protein:Tk02974 transcript:maker-scaffold267_size230776-snap-gene-1.25-mRNA-1 annotation:"vitamin d3 receptor b") HSP 1 Score: 63.929 bits (154), Expect = 6.643e-11 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
N C VT TRK+CQ CRF KCL GMK+SWV+++E+K E+ EK +K
Sbjct: 190 NNQCAVTPATRKNCQKCRFDKCLGAGMKASWVLSDEEKLERLEKKRSRK 238 HSP 2 Score: 59.6918 bits (143), Expect = 1.609e-9 Identity = 49/216 (22.69%), Postives = 92/216 (42.59%), Query Frame = 0
Query: 405 EESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTA-RFFQHG-VHFKKHIFFVNNTDDDP---KYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFD-LQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVM 614
E S IP+ + M+ +++ + D L+ + RI+ + L F+ S D+K LL N DMI I+ A F G + I F + ++ + M+ Q+F PWA ++ + + +++ L+ D + L +++LF N ++ DE QE L+ KY+ G A + + L +A+++
Sbjct: 319 EGSRHTIPMSGPVLEQMVKLTHTGEGIHPDTILDFFKTVYCRIVNSVNQLGSFSQLSDGDKKRLLSKNMDMISTIQIASTLFADGRANLDAQIQFTGHAEEIANLTGHMGMEVKQLFVRPWAKNESHMEYFYSTTRQLAKLLREDPRVSTLFQLVALFHGENLELKDERIIEAVQEAMATLLHKYLKSRFGPQLANSTFSNLMSSLYDLRYLAEIL 534
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold188_size271682-snap-gene-1.24 (protein:Tk00140 transcript:maker-scaffold188_size271682-snap-gene-1.24-mRNA-1 annotation:"vitamin d3 receptor-like") HSP 1 Score: 59.6918 bits (143), Expect = 1.627e-9 Identity = 53/237 (22.36%), Postives = 99/237 (41.77%), Query Frame = 0
Query: 397 ISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD--------------DPKYGRMDTFQIFQSPWACSDE-DEKKYNDLMKKIFDLQLDEISTV--LISMMS---LFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQV 613
I I ++ + + + + M+ CS + + Y + ++R+ Q+++ D F DQ+AL+ TN D+IV++R A FF I F DD GR+ ++ + S E E KY+ LM ++ L +ST+ L+ +MS LF ++ D+ R Q+ N++++ I A ++ + + I L E+ +
Sbjct: 402 IRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIH-YRNYNSIQQLDHEPTENKYSMLMTRVGSL----VSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLI 633 HSP 2 Score: 51.9878 bits (123), Expect = 4.056e-7 Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0
Query: 30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFN 98
C V +RK+CQ CR+ KCL GMK +WV++EE++ + K KK + Q + S+ +S S N
Sbjct: 203 CQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKAR----QGSQASSPGHRSDDSSN 267
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold48_size466083-snap-gene-1.23 (protein:Tk05971 transcript:maker-scaffold48_size466083-snap-gene-1.23-mRNA-1 annotation:"retinoid x") HSP 1 Score: 54.6842 bits (130), Expect = 1.460e-8 Identity = 29/82 (35.37%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 26 DNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQL--------HRVSTKSKKSQQSFNK 99
+++NC + +RK CQYCRF KCL GM SWV+++++++++ +K K+ +LK QL R++++S + +QS K
Sbjct: 100 NDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQ-ELKQEQLAFSGHGLSRRMASRSGREKQSHPK 180
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold28_size608977-processed-gene-1.5 (protein:Tk05738 transcript:snap_masked-scaffold28_size608977-processed-gene-1.5-mRNA-1 annotation:"thyroid hormone receptor alpha 1") HSP 1 Score: 55.8398 bits (133), Expect = 2.070e-8 Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 24 VDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEK 67
V+ N NC++ K TR+ CQ CRF KCL GMK +WV+++ ++K +
Sbjct: 84 VEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRR 127
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold58_size443543-processed-gene-3.1 (protein:Tk00704 transcript:snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1 annotation:"nuclear hormone receptor") HSP 1 Score: 50.0618 bits (118), Expect = 3.078e-8 Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 0
Query: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKS 55
NK+C VTKH R CQYCR KCL++GM+S
Sbjct: 46 NKDCEVTKHHRNRCQYCRLQKCLAMGMRS 74
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold92_size382268-snap-gene-1.23 (protein:Tk08749 transcript:maker-scaffold92_size382268-snap-gene-1.23-mRNA-1 annotation:"hormone receptor-like 97b") HSP 1 Score: 53.9138 bits (128), Expect = 9.657e-8 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query: 29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEED-KKEKKEKAFIKKVK 77
+C +T TRK+CQ+CRF +C GMK SWV+ + D KK KE ++ V+
Sbjct: 363 SCTITLKTRKNCQFCRFQRCERAGMKRSWVLADGDRKKGAKEPLKVEGVE 412 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012965 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000012965 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 8
BLAST of EMLSAG00000012965 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 7
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 7
BLAST of EMLSAG00000012965 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 5
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s98:1224628..1226761+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012965-695731 ID=EMLSAG00000012965-695731|Name=EMLSAG00000012965|organism=Lepeophtheirus salmonis|type=gene|length=2134bp|location=Sequence derived from alignment at LSalAtl2s98:1224628..1226761+ (Lepeophtheirus salmonis)back to top Add to Basket
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