EMLSAP00000010807 V-ATPase, EMLSAP00000010807-1 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010807 V-ATPase
Unique NameEMLSAP00000010807-1
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length887
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..316
NoneNo IPR availableCOILSCoilCoilcoord: 362..383
NoneNo IPR availablePANTHERPTHR11878:SF4SODIUM/CALCIUM EXCHANGER 2coord: 16..1075
NoneNo IPR availablePANTHERPTHR11878SODIUM/CALCIUM EXCHANGERcoord: 16..1075
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.859
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..29
score: 0.509
NoneNo IPR availableSUPERFAMILY141072CalX-likecoord: 525..670
NoneNo IPR availableSUPERFAMILY141072CalX-likecoord: 395..532
NoneNo IPR availableTMHMMTMhelixcoord: 766..788
NoneNo IPR availableTMHMMTMhelixcoord: 226..243
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 872..894
NoneNo IPR availableTMHMMTMhelixcoord: 1052..1074
NoneNo IPR availableTMHMMTMhelixcoord: 837..859
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 1009..1031
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 904..926
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 724..746
NoneNo IPR availableTMHMMTMhelixcoord: 977..999
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 795..817
IPR004836Sodium/calcium exchanger proteinPRINTSPR01259NACAEXCHNGRcoord: 909..921
score: 59.92
coord: 922..933
score: 62.28
coord: 935..947
score: 60.73
coord: 948..961
score: 94.36
IPR004836Sodium/calcium exchanger proteinTIGRFAMTIGR00845TIGR00845coord: 29..795
e-value: 2.4E-303
score: 1006.2
IPR003644Na-Ca exchanger/integrin-beta4SMARTSM00237Calx_betacoord: 514..613
e-value: 1.9E-32
score: 123.8
coord: 384..483
e-value: 5.3E-38
score: 142.2
IPR003644Na-Ca exchanger/integrin-beta4PFAMPF03160Calx-betacoord: 514..611
e-value: 8.5E-26
score: 89.7
coord: 388..483
e-value: 1.1E-28
score: 98.9
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 80..238
e-value: 2.4E-31
score: 108.1
coord: 914..1065
e-value: 6.4E-22
score: 77.5

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010807 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010807EMLSAT00000010807-706654Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010807-1 ID=EMLSAP00000010807-1|Name=EMLSAP00000010807 V-ATPase|organism=Lepeophtheirus salmonis|type=polypeptide|length=887bp
MDWGPFGRLKRTVTAAMSGYSNEFDEESSYQDGGGFQMQEQAGEEGAQLN
SGGVGGEVNTQPPPPSTTPGSLFRSEEMVLCQLFLQSEAAYACVSELGEL
GLVQFRDLNPDTNVFNRKFVNEVRRCDEMERKLRYLESEIKKDDIPMLDT
HDSPEAPQPREMIDMEATFEKLEHELQEVNQNAEALKKNYLELTELKHIL
RKTQQFFDEQDQLELGGGGGVDGQHQQLISEETGTSGLQLGFVAGVILRE
RLPAFERMLWRACRGNVFLRQAEIEDTLEDPAVGSQGVLKSVFVIFFQGD
QLKSRVKKICEGFRATLYPCPDQSADRREMAVGVMQRLEDLSAVLGQTND
HRHRVLVAAAKNVKSWFVKVRKIKAIYHTLNLFNLDVTYKCLISECWVPS
ADIDSIQLALRRGTEKSGSTIAPVFNVMITKESPPTFFRTNKFTLGFQEM
INSYGIATYQEANPAFWTVTTFPFLFAVMFGDAGHATIGLCVGLWMCLKE
KQLAARKIENEMWKIFFSGRYIITLMAMFSIYTGLIYNDFFSKSVNIFGS
SWKPTTPKEEMMSIDSEMIDPSKGGYANVPYPFGVDPVWQVSDNKIIFLN
AFKMKVSIILGVIQMTFGVVISNWNNKFFGKTMNIFAEFIPQIIFLMVLF
GYLALLIFHKWVTYFANDLEDSFTYSERCAPSILLLFINMVLNKDTAYEE
ACGTPYMFAGQGGIQQFFRIIAVICIPWMLLVKPFLVRKDYKARVAANGX
RHPEGEEPFNFVEIMILQGIHTIEYVLGSVSHTASYLRLWALSLAHAQLS
EVLWMMVLRSGFSSDQWYGGVILWFAFSFWAVITVMILILMEGLSAFLHT
LRLHWVEFMSKFYSGSGHLFLPFSFEEILQKAESSCD
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