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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 295..316 |
None | No IPR available | COILS | Coil | Coil | coord: 362..383 |
None | No IPR available | PANTHER | PTHR11878:SF4 | SODIUM/CALCIUM EXCHANGER 2 | coord: 16..1075 |
None | No IPR available | PANTHER | PTHR11878 | SODIUM/CALCIUM EXCHANGER | coord: 16..1075 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..27 score: 0.859 |
None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..29 score: 0.509 |
None | No IPR available | SUPERFAMILY | 141072 | CalX-like | coord: 525..670 |
None | No IPR available | SUPERFAMILY | 141072 | CalX-like | coord: 395..532 |
None | No IPR available | TMHMM | TMhelix | | coord: 766..788 |
None | No IPR available | TMHMM | TMhelix | | coord: 226..243 |
None | No IPR available | TMHMM | TMhelix | | coord: 194..216 |
None | No IPR available | TMHMM | TMhelix | | coord: 872..894 |
None | No IPR available | TMHMM | TMhelix | | coord: 1052..1074 |
None | No IPR available | TMHMM | TMhelix | | coord: 837..859 |
None | No IPR available | TMHMM | TMhelix | | coord: 159..181 |
None | No IPR available | TMHMM | TMhelix | | coord: 1009..1031 |
None | No IPR available | TMHMM | TMhelix | | coord: 127..149 |
None | No IPR available | TMHMM | TMhelix | | coord: 904..926 |
None | No IPR available | TMHMM | TMhelix | | coord: 7..29 |
None | No IPR available | TMHMM | TMhelix | | coord: 724..746 |
None | No IPR available | TMHMM | TMhelix | | coord: 977..999 |
None | No IPR available | TMHMM | TMhelix | | coord: 64..86 |
None | No IPR available | TMHMM | TMhelix | | coord: 795..817 |
IPR004836 | Sodium/calcium exchanger protein | PRINTS | PR01259 | NACAEXCHNGR | coord: 909..921 score: 59.92 coord: 922..933 score: 62.28 coord: 935..947 score: 60.73 coord: 948..961 score: 94.36 |
IPR004836 | Sodium/calcium exchanger protein | TIGRFAM | TIGR00845 | TIGR00845 | coord: 29..795 e-value: 2.4E-303 score: 1006.2 |
IPR003644 | Na-Ca exchanger/integrin-beta4 | SMART | SM00237 | Calx_beta | coord: 514..613 e-value: 1.9E-32 score: 123.8 coord: 384..483 e-value: 5.3E-38 score: 142.2 |
IPR003644 | Na-Ca exchanger/integrin-beta4 | PFAM | PF03160 | Calx-beta | coord: 514..611 e-value: 8.5E-26 score: 89.7 coord: 388..483 e-value: 1.1E-28 score: 98.9 |
IPR004837 | Sodium/calcium exchanger membrane region | PFAM | PF01699 | Na_Ca_ex | coord: 80..238 e-value: 2.4E-31 score: 108.1 coord: 914..1065 e-value: 6.4E-22 score: 77.5 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010807-1 ID=EMLSAP00000010807-1|Name=EMLSAP00000010807 V-ATPase|organism=Lepeophtheirus salmonis|type=polypeptide|length=887bp MDWGPFGRLKRTVTAAMSGYSNEFDEESSYQDGGGFQMQEQAGEEGAQLN SGGVGGEVNTQPPPPSTTPGSLFRSEEMVLCQLFLQSEAAYACVSELGEL GLVQFRDLNPDTNVFNRKFVNEVRRCDEMERKLRYLESEIKKDDIPMLDT HDSPEAPQPREMIDMEATFEKLEHELQEVNQNAEALKKNYLELTELKHIL RKTQQFFDEQDQLELGGGGGVDGQHQQLISEETGTSGLQLGFVAGVILRE RLPAFERMLWRACRGNVFLRQAEIEDTLEDPAVGSQGVLKSVFVIFFQGD QLKSRVKKICEGFRATLYPCPDQSADRREMAVGVMQRLEDLSAVLGQTND HRHRVLVAAAKNVKSWFVKVRKIKAIYHTLNLFNLDVTYKCLISECWVPS ADIDSIQLALRRGTEKSGSTIAPVFNVMITKESPPTFFRTNKFTLGFQEM INSYGIATYQEANPAFWTVTTFPFLFAVMFGDAGHATIGLCVGLWMCLKE KQLAARKIENEMWKIFFSGRYIITLMAMFSIYTGLIYNDFFSKSVNIFGS SWKPTTPKEEMMSIDSEMIDPSKGGYANVPYPFGVDPVWQVSDNKIIFLN AFKMKVSIILGVIQMTFGVVISNWNNKFFGKTMNIFAEFIPQIIFLMVLF GYLALLIFHKWVTYFANDLEDSFTYSERCAPSILLLFINMVLNKDTAYEE ACGTPYMFAGQGGIQQFFRIIAVICIPWMLLVKPFLVRKDYKARVAANGX RHPEGEEPFNFVEIMILQGIHTIEYVLGSVSHTASYLRLWALSLAHAQLS EVLWMMVLRSGFSSDQWYGGVILWFAFSFWAVITVMILILMEGLSAFLHT LRLHWVEFMSKFYSGSGHLFLPFSFEEILQKAESSCD back to top
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