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Associated RNAi Experiments
Homology
BLAST of microneme protein vs. L. salmonis genes
Match: EMLSAG00000011235 (supercontig:LSalAtl2s:LSalAtl2s76:162109:178326:-1 gene:EMLSAG00000011235 transcript:EMLSAT00000011235 description:"maker-LSalAtl2s76-snap-gene-1.36") HSP 1 Score: 282.722 bits (722), Expect = 7.998e-93 Identity = 132/284 (46.48%), Postives = 189/284 (66.55%), Query Frame = 0
Query: 7 PIVLSLLVAGS----RARNIM-ENAPIMCPIEDDNLIDVQLFTSGQKECAKECEKSDACKFYRFYSASFTRPSQCFLFKSCGRKVEDASPDCMLNKENTVEVKPFIKSHEKCKQLCQEERRCAYFKYFAKRAPRELDPEPTS--LNVIGATQEEFCFILRSCSKRMVDNIQCTLGKNNFLDVKFFVASTEECQQHCQQTDGCRYYWWYPLDYSEAPAYCYLYRQCAPKDEEPKVALIIGGRHPGHYFMTQEQHNDLIMRNDVCMLETKDNVSLARAGALSMYVG 283
P + LL+A RNI+ ++AP +CPIED NLI V+LF ++EC K CE S C F+RF+ A +PSQC+LF +CGR VE A+ +C L++ENT++V+PF+ + +C+ CQ+ER C +K F + E E L + T+ EFC++LRSC+KRMV+ +C LGKNNFLDVKFFV S+E+C +HC +T+GCRYYWW ++ SE P YCYL+RQCA D EP+V LI+GGRHPGH+F++ + ND++ R ++ S G+++ +G
Sbjct: 5 PWTVFLLIASLPNFLEGRNILLKSAPQLCPIEDGNLIGVELFVEDEEECFKFCENSKECLFFRFFHALDQKPSQCYLFNTCGRHVESATSNCQLSRENTIDVRPFVPTESQCQIRCQQERDCGXYKXFTDESSLESLDESNDVLLTLKEDTKSEFCYLLRSCAKRMVEKTKCVLGKNNFLDVKFFVQSSEKCGKHCLETEGCRYYWWXSIEESEHPMYCYLFRQCAASDAEPEVTLILGGRHPGHHFISNKDENDVVSR-------PREEASSVTIGSVTYVIG 281
BLAST of microneme protein vs. L. salmonis genes
Match: EMLSAG00000008643 (supercontig:LSalAtl2s:LSalAtl2s534:149747:152503:1 gene:EMLSAG00000008643 transcript:EMLSAT00000008643 description:"maker-LSalAtl2s534-augustus-gene-1.30") HSP 1 Score: 243.047 bits (619), Expect = 2.054e-76 Identity = 120/316 (37.97%), Postives = 181/316 (57.28%), Query Frame = 0
Query: 6 LPIVLSLLVAGSRARNIMENAPIMCPIEDDNLIDVQLFTSGQKECAKECEKSDACKFYRFYSASFTRP---SQCFLFKSCGRKVEDASPDCMLNKENTVEVKPFIKSHEKCKQLCQEERRCAYFKYFAKRAPRELDPEPTSLNVIGATQEEFCFILRSCSKRMVDNIQCTLGKNNFLDVKFFVASTEECQQHCQQTDGCRYYWWYPLDYSEAPAYCYLYRQCAPKDEEPKVALIIGGRHPGHYFMTQEQHNDLIMRNDVCMLETKDNVSLARAGALSMYVGQKVLYCGGRNGHG-VHTDCLAFHPHNNTWNHHSNM 317
+ I+ + L++ R M +A CP+ED NL+DV LF + + EC +EC ++C FY +Y ++ SQCFL+ +C R V A C +NKENTV+V+ FIK E C+ C E C Y+ Y G +E FC+ L+SC R+V + +C L K+N++D F AS E+C++ C + CRYY+WYP+DYS +P YCYL+R C +E +V + GGRHPGHYF+ +E +++ VC +T ++ S+ RAGA + YV + +L CGGR+ + V DC + + W+ HS +
Sbjct: 16 IGIITTTLISYVECRPKMRSALRTCPLEDGNLLDVLLFVNNENECYEECADHESCLFYHYYKSNDEEKGQHSQCFLYDACTRHVHPAKSGCPINKENTVKVEVFIKDEEVCRTSCSESPMCGYYLYN------------------GEAKERFCYHLKSCVPRVVLHYECPLLKSNYIDHYLFTASEEKCRERCDENGECRYYYWYPIDYSPSPLYCYLFRSCEGATQEHRVGFVTGGRHPGHYFLNEESSTEIVKSGAVCK-KTSNDTSMGRAGAXADYVSEGILLCGGRDLNSQVKKDCRLYGVVSGLWSDHSEL 312
BLAST of microneme protein vs. nr
Match: gi|1325290580|ref|XP_023329712.1| (kelch-like protein 20 [Eurytemora affinis]) HSP 1 Score: 311.997 bits (798), Expect = 3.467e-99 Identity = 134/321 (41.74%), Postives = 210/321 (65.42%), Query Frame = 0
Query: 9 VLSLLVAGSRARNIMENAPIMCPIEDDNLIDVQLFTSGQKECAKECEKSDACKFYRFYSASFTRPSQCFLFKSCGRKVEDASPDCMLNKENTVEVKPFIKSHEKCKQLCQEERRCAYFKYF--------AKRAPRELDPEPTSLNVI---GATQEEFCFILRSCSKRMVDNIQCTLGKNNFLDVKFFVASTEECQQHCQQTDGCRYYWWYPLDYSEAPAYCYLYRQCAPKDEEPKVALIIGGRHPGHYFMTQEQHNDLIMRNDVCMLE-TKDNVSLARAGALSMYVGQKVLYCGGRNGHGVHTDCLAFHPHNNTWNHHSNM 317
++S+L R+ ++ +AP +CP++D N+++V+LF EC++ C+ +C +Y+FY++ +P QCF F++CG+ V +A+P+C+L+KEN + ++PF+ +KC + CQ R+C Y+KY + ++ P+ + + A +FC++L SCSKRM++N+ CT+G NNFLDVK FV S CQ HC QTD CRYY+WYP+DYS AP YCYL+R CA D+EP+VA ++GGRHPGHYF+ + ND++ R DVC + + + + RAGA ++Y+ VL CGGR+G +DCL++ W+ HS +
Sbjct: 10 LISVLFPIIRSSPLVRSAPEVCPLKDGNILNVKLFIKDDIECSRLCQGDPSCNYYKFYASLDGKPPQCFFFETCGKTVYEAAPECVLSKENCLGIRPFVSGKDKCMEACQNHRQCGYYKYVPGELEINEEEEGSGDIIPKGRQIPIARLADADTPQFCYLLSSCSKRMIENVLCTIGANNFLDVKLFVPSLAACQLHCDQTDDCRYYYWYPIDYSAAPLYCYLFRSCAVNDDEPEVAFVVGGRHPGHYFIDSDNFNDVVTRTDVCPVRISPADARVKRAGASAIYIKGSVLLCGGRSGEVTFSDCLSYDLETEIWSDHSTL 330
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold1126_size61158 | supercontig | scaffold1126_size61158:44609..51779 + |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1126_size61158:44609..51779+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold1126_size61158-snap-gene-0.10 ID=maker-scaffold1126_size61158-snap-gene-0.10|Name=microneme protein |organism=Tigriopus kingsejongensis|type=gene|length=7171bp|location=Sequence derived from alignment at scaffold1126_size61158:44609..51779+ (Tigriopus kingsejongensis)
ATGGTGAGCTCGGCCCTGCCCATCGTGCTGAGCCTGCTCGTGGCCGGCTC
GAGGGCACGAAATATCATGGAGAATGCACCCATAATGTGTCCGATTGAGG
ATGACAACCTCATCGATGTGCAACTATTCACCAGTGGCCAGAAAGAATGT
GCGAAGGAATGCGAAAAATCGGACGCCTGCAAGTTTTACAGGTAACGTAA
AGGAATTGTCAATTGTAACTGGGCATGTACAGTGTGTGTCACTCAAAATT
AACACCCACGCGCTAACAACAGATGCGGAATTCGCCATGAATGTTGTGCG
AATGTCGGATAGGTTCGAATTAATAACGGCTGACAAGCAGGATGCAGTGT
CATTGATCGGGAAAGACTTCATATACAAAGTTAAAATTAACATTGATTTA
AAATACAGTATATCTCAGCCGATATGGCACTTAAATGTGGCTCAGAGACG
GCACTCGTGGAATAGTTGTGTTGCCATGTTTAGTTCAATTTTTTCCAAGT
TAATATAACCCCACCTCGAAAACTAGCTGAAGTTTTGCTTTTTAGGCGTT
TCATTGTCCAGGAATCAAAATACCTACCATGTCAAAGGTGAATAGGTTGA
AGTGATCCAATGACATGGTTTTTGTTTGTTTTTTAAGGCCCCAGGCATTT
CTACTCACCAACATAGTTAGCCTGGTGGACAATTTTTTCATAAATCATTA
CCTTACCCTAGAGTAATGATATAATGTTCGTCTAAATTAATACTGCAATA
GACGGAAGCAAAGAATAGCTGTGATTTAATGCTCAAAGTTGTCGAAACCT
GGCCAGCCAGGGGATCAAACTTACGACCCTTGGGTAACGCAATGATAGAT
GACTGAACTACCATTGCGCTACGCTGCTCGTGATTTAGCTGAACTTATCA
AAATCCATTGTTTAAGCTTCTTTTAAAACTAGTTTCTCGTTTTGAGACCA
AGGGAACTGATTTCCCCCCATAAATTAAGTTAGCATTTTACAAAGTTAAA
ATATTATCATATATGAAATAATTTACCGTTACATACCCGAATATGGAACG
TGGTCAAGCTAGAAAAATTGATTGCGCAACCCAAAATAGGTCAAATTCAT
CTATTTGACCTTTTCCATGGAGTGCTTGAAGTTTTAAAGCTGCATTTCTA
TTGTGAAAATTTGATAACTTTTGAACTACCGACGGATTTTTCATTCATTT
TAAATTGAGATATTAAATTTCATGCTAAAATAACGATACTTTAAATGATC
CAATTAACAAATAGTCTTCTCGCTCATGCCATTCATTCTCATTTTATTGA
CCTGCCAATGGGAACAACGGCTTTTGTGGCAAAATGTTTGTCTTAACACA
TATATTGCTTTATCACAAAATAAATACCAATACCCATACCGATGAAACTT
TAAATACAAATATACGATATACCAATCAGGAGAAACGCGTGAGGCTCAGG
ATTTGTACATTTTTCATCTCATACCTTTTAACGTTTCTTCATTTTCTGAT
TCCAACAATTCACATTCATGGGAAACCAGAAATAATCCTTCTTGAGAGTC
CACAAATTATGAAAGTCAGGTTGGATCTTCACGTTTACTCATTTAACAAA
TATGGATCCACTAAACAAATTTACTGCCTTTGAAAAACGCATTTATTCAC
AATTTTAAGACACATGGTCCATAATACAGCAAATGAAATATTTACAAAAA
TATTTATAACAATTTGTGCTTGCGTAGCTTAAATAATGCTTCCAGATGCA
CGGAGCCCCGTGGTAAAGCATATTCCCAAATCTGAGGACAAACCTAAGTA
GTTCCCAAGTCGCAAAATGGTCGGAGTGCTTTTATCCCCTTTCGTGTGGG
GAAACCATCTTATTCCCTAGTTCAATATGGTGTGGAGTTGATTGCAGCCT
TCAACTAAAGTGGGCGTGTTCCTCCCGGGCAAGAGCACTTCAGATGTGTG
TGACAAAAGAAAGTGGCTACCAGATCCCCTGACTGTCAAGGGGACAAACT
ACTACTATCGCGCTCAAGCGGCTAAGCTGGATGAAGTGGAGTCTCATATC
CTTCCTCTTCAAGACAGCCTTCATAATTCCTTCCATGGAATCTTGAAATA
ATTCATCTCCTGGAGCTATGAAAGCTGGCTCCCGTCCCTGGATGAGAGAT
CAACTGGAGATGCACAGTCTTGGCCACCCGCTATACAGTACTTTTCATAC
CTGTGAAGGCATGTGCGTATTGTGCGTAGAATGACTTGAAGGTTAATAAA
AGTGGGGCTTCAACATTGATAGCATGTTTGAGTCTTCAGTCTTTCAAAGG
GTTGAATTGTTGTTGTTTTCGGGTCCCAAGCACACATCTAGTAAATAGAG
TGGCTCATGGACAGCAAACATTATTTCTCCAGGCTTGATTTGACGGGTGG
ATTGAAGAGGCAGAGTGTGTGTGTAATCGCACCTTCCAGTAGTTTCGTGA
TCCACACTATGAAACCCCCATGTGTATATAGATCTCCTCCAGGCAGGCAA
CAAACCTGACATTGCGATTTGCATCGATTTATGGGCAATGGAAACATCTG
AAAAACATCATTTAAGTCGACATTCAATGACATCAATAATCCATTAGTGT
TTGGCTCCAAACTCCCGTTGATGCAAGAGTTTATGTGTATCTTGTGTAGC
TGCCTTTTGTTATGTGAAACATTCTCTTTCTCAGGGTTTACAACTACATA
AATTCAATAAAGTATTACTTTTTTCTACTTACTTATTTTTTTCTCCAAAA
GTACTTATTTTTTACTTCAAAAGCACTTACTTTTTTCTCCAAAAATACTT
TTTTTAACTTTAGTATTACTTATTTTTTACTGAAGTAATTTGTTTTCTGA
ATTGTGATTTATTTTTTATAGTATTACTTATTTTTTACGCAAGTTTTTTT
TTTACTTAATTATGACTTACTTTTTACTTTTGCATCACATATTGTTCAGT
TAGGTATCACTTCTTTTTACTTAAGTATTACTTATTTTTGTGTGAAGCAT
CACTTATTTTTACTTGCTATCACTTGATATTTATATATTTTACTAAAAGT
AAAATATAGTAGGAACTTATGTGTAACTTATTTTCTACTTAAGTTTTACA
TTTTTTTACTTCATTATTACTTATTGTGTTTTTTGTTATTTAATTTTACC
TAATTTTTTGCTTATTTTGCTTATTTTGTTGTTTTACTTTTTTTTAGTTC
ACTTATTTTCAGTATTACTTTTTTTTAGTTTTACTTCTTTTTAGTTTTGC
TTAGTTAACTTGCTAGAACTTAGTTAAGCACCAATAGAGCTCAATTAAGT
TGCAATCTTAATAATTAGCCATTATTTACAACTTTTGGACCCAAAACTAT
GGAACAAATTAGTGGATGGCTTCGAATGTGCCCAAGCAATACAACCAAGA
TCGACCATTGTTTGATGAATTTTACAAAATTATTTTGTTGATTTGTTCGA
GTTTGTATACGACTTGTCGTTGATTCTTTAGAGCTTTTGGTTGAGAATTC
TATAATTTGGGAAGCATTTACTGTATTTTGTATAGTTTTGTTCACATTCT
TTGTGCTTGGTATAGTTTTGTACCCAATTATGTTGTTTCTCCATTATTAT
GTTGTGTTGTTTGTTTTGTATAATCTTGCTCTCATTTTGTTACGATTCTG
CAGTTTTCTATTCTTACCTTTGTTGCTTAGATGGTTTTATAAATGGCCCT
AACATTATTGACTAGCATTTGTTTGCCAAGTGTTAACTCTTGGGCATAAA
CCTGTTTTCAATATTTGTGAAATAAACGCGATCACAAACACTACCAATTG
CTACTGCTTATTCCTTTCTCAGTAGGGATTTATCGTTTAAGATGAGTTTG
TTCTTGGCTAACATTTTAGCCGGCTTTCCACTCAAGATTTCATTTGAAAC
TGTGTCTAATAGAGAGGATGCTTTGTGATTGCTGGCCTTCAATAGTATCG
TCCTTAGGCGAAGGTGTAGAAACTGGACAAGTACAGAGTGTTGTACTGTA
CACCGGATAGTGTAATTACGGTGCAAGTGTGTACTACAGTAGATCCACAT
TCTGTTCTGAAAGCGACCCCCGCGACAGGTATTGTTTTTGGTGTCGAGAA
AAAGACTTGGCTAAGGCGTGAAGCACTAGACATGTACAAAGTTTTTCAAT
CCGGGTTAACCCCTGGCTTTCTTTCCAGATTTTACTCCGCTTCTTTTACC
CGTCCCAGTCAATGTTTCCTGTTCAAAAGTTGTGGCAGGAAAGTGGAAGA
TGCATCTCCGGATTGCATGCTCAACAAGGAAAACACCGTCGAAGTTAAGC
CCTTCATCAAATCGCATGAAAAGTGCAAACAATTGTGCCAAGAGGTGAGC
ATTGAACGTTGAACCAACCCAATCTAAGGCCAAACTCATCAAGGCCAACC
AGATAAAAGGTTGACCCAAGGGCGTTTAATACAGGCGGAGAGTACAGGCT
TTCCAAAAATAACGATGGTTCCCAAATGTCAGTTCTAATTCCGGTTCCAA
GGTGACCCAAAAGGGGTTCGAGCATTCAGATGTGAAGTATCGATCAGTAG
CAGTGGCACTATTATTTTTTATTCATTGACGAAGTGAATCGTGACTTATT
CAATGTTGTTGTATCAAGCAGGACACTTTGCAAGACCATATACTGTTCGA
TATACCAATTGGTAATAAAGAATGGAAGCAGCAGTGTGAACATGGTAATT
CATGCTATACGCATGAAAGGACGTAAACGTACCAACCTTCTTCACCGTAC
TTATATCAAGGGTGCAGTGCTGCCAGATATGCTATTCAGAACAAGTTTGT
TATAGCTAGTACTCGAAGGCTCTTTTCTACGAAAAAACTTTTTTGTATGT
TTCTCCCCAATGTTTAATTTTTTTTTAAGCTTTTCAGGCAAATTTTGACA
TTATTTCCCACCTTTTCAAGATTTTTCGTGCTCTGAACCCGGCTATTTCC
TTCATTTCTCATTGACCTCATTAATACACTGTGTTAAATCAGGTCCCTCT
TGGGTCAAACTATCTTGAACTCGGTGCAAGGATTGAAATACATCTTCAGA
AAGTTTTTGGGTCGAATATGTCTCTTCGAAGAAAAAACTGTGAAATTATT
GTACTCTAATGATCATTCCTAGGGCCTTCCAAACAAACAAACAAACAAAC
AAGCAATCAAACAAACAAACAAACAAACTGATATACAGTGGCTATGAAAA
AAATTAACGTACCTACCTTCTTCACCCAAATCATGTCAAGGGTACAGTGC
TGTCAGAAGTGCTGATTAGAAAAAGTTTGTTTTTGTTAGGCCTCGAAGGC
TTGTTTGCCCCTCTCTAACAAAAAACACATTTTTAATGATTCTTCTGGAT
ATTTAACTTTGTTTTGGCAAATGTCGACATTTTTTCATTTTCTCCCACTA
AGGTATGGATGTCACCGCTCTGTTGTACTAGGCTCTCTAGGTACTTTGTC
CCGAGAACTTTTCTTCACAATCTTCAATTATGTATTCACAGGAACGCAGA
TGTGCCTATTTTAAATATTTTGCCAAGCGTGCGCCCCGAGAGCTGGATCC
CGAGCCCACGTCGCTCAATGTCATTGGTGCCACCCAAGAGGAGTTTTGCT
TCATCCTCCGGTCCTGTTCCAAGCGCATGGTGGACAACATCCAATGCACC
TTGGGGAAGAACAACTTCCTGGACGTCAAGTTCTTTGTGGCCTCCACGGA
AGAGTGTCAACAACACTGCCAACAGACCGATGGTTGCCGCTACTATTGGT
GGTACCCTTTGGACTACAGCGAAGCTCCAGCCTACTGCTACCTTTATCGC
CAATGTGCTCCAAAAGACGAGGAGCCGAAGGTGGGACCGCCACTAATGTG
TTCCCTTAGCGAGGAGGGTAGCTAAATTTTAGGGTTGTGCTTCCAGGTGG
CCCTGATCATCGGCGGCCGACATCCGGGACACTACTTCATGACCCAAGAG
CAACACAATGATCTCATCATGAGGTAGGTTCGACCCATGTGTCCATTGAG
GGGTGACTGAACCCTTTGCTGTACCAGGCACAGACTGGATTTTGCGGTCG
ATGGACAAATGACTCTACCTCTCATTAGAAAGCGTTTGCACTTCCTCGCT
GCGCTTATTTATGCCAACGTTCTCCCCAGGCTGAAATATTGATGAGTTGT
TGAGGTAACCAACCATCATCCTTCAAGCCCACCTGGTCTATCTCCAATCG
ATGCGCCGGAAAGTCAGGAACACTGAAGTGTTCCAACTCGACCCAAATTG
AGCTCTAGCCAAACTGACCATTCAAATCCACAGGGTGTGGTCTATGTTGC
TGACCGCTCAATTTTGCACGAAAACACCAGTGCTCCATATAACTTTCAAT
GATATACACTGTACAGTATGTGTTGTCCAATTCAAATCCACTGGGTGTGG
TCTATGTTGCCTACCGCTCAATTTTGCACGAAGTAAGTATTTTGATCTTG
CCCTGAGGATCAGATTTAAAGGAAACGTTAAGAGGTTTTTTTAAGAAAAT
GTAACTTAGTTTTTTGCTCGCATAAAACCGAGAGAATCAACGCCCGACCG
ACAGTAAAGTGTTTAAATTGATATTGCAGGATATATTTTAAAAGGGGTTA
TCTGTTGTATGCACCTTATTTCGACGGTTTAAAACACTCTCAAACTAGTG
AGAATAGTCGGAAAAGTGCAGTCAAGATTTAAGACAGAGGCTGAAAAAAA
GGGTATATGCTTGCAGACTTACACTTGGGTTTGACTATGCTTGTATAATA
AATACACGAGTAGACACACCAACTCATTTCTGATCAATTTTCTTGTGATA
TTGAGACGTAGCAAATGCTTCACCCGGTGCAAGCGGACATACAAGAGATG
GCCCAATTTACGTTCCAGTACACTTCAATGTACAGATTCAAATGATCCAT
CCAATGTTTATAAACGAGAGGCCGATCGGACCAATGTCGCATGCCTAGAT
TGATTCAACTTTCAAACGATGGATCACAATTTTGTTCCAGGAACGATGTG
TGCATGTTGGAAACCAAGGACAATGTGAGCCTGGCCCGAGCAGGAGCCCT
CTCCATGTACGTGGGCCAGAAGGTTCTGTATTGCGGTGGACGCAATGGTC
ATGGAGTACACACGGATTGCTTGGCTTTTCACCCCCACAATAATACGTGG
AACCACCATAGCAATATGGTC back to top
Synonyms
The feature 'microneme protein ' has the following synonyms
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