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Associated RNAi Experiments
Homology
BLAST of neural proliferation differentiation and control protein 1 isoform x1 vs. L. salmonis genes
Match: EMLSAG00000007415 (supercontig:LSalAtl2s:LSalAtl2s421:347870:350953:-1 gene:EMLSAG00000007415 transcript:EMLSAT00000007415 description:"maker-LSalAtl2s421-augustus-gene-3.32") HSP 1 Score: 84.7297 bits (208), Expect = 2.260e-17 Identity = 90/249 (36.14%), Postives = 115/249 (46.18%), Query Frame = 0
Query: 394 FVAMGIGLAA-QCVADRVKL-----MKDKSVLGRMRSPNG-DDE--TPPELNGSVPFGSSPCDRSPSDARNGKM--SNMNPPLFTGKLILHDPP-----------GLSSSALCRTTAAAASKMTNTLFAAQQAVIMPSPAEQVTDDLISPKYDTDD----CSENEDD---------SDDTVYECPGLAANATAMEEMVVKNPFYLQG------------GEIGLRPTLANSSDPQPISSQSSIFHHGIK 595
FVA+ +GL A Q + +L D++ R N DDE TPPEL G GS P P D +N ++ ++ +PP F GKL+L+D P S+ L T + AS AAQ+A+ +PSP+ +DL S D SE EDD SDDTVYEC GLA +M V+NPFYL G E+G L P+PI SQ SI HHGIK
Sbjct: 431 FVAIALGLVALQSSSIIFRLPSLHNSHDRANDETRRKINHFDDEDLTPPELRG---LGSQPSFVQP-DVKNKEIGSNDTSPPFFYGKLMLNDSPTDGGETQNGGSNNKSNILSNTVNSVAS----MFLAAQEAISIPSPSPPAKNDLSSNDLMVIDPMFGGSEGEDDHESQESEEESDDTVYECRGLAPTG----DMEVRNPFYLHGQDAFSNKDPSPQNEVGAHHPLQ----PKPI-SQCSILHHGIK 662
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold1135_size60270 | supercontig | scaffold1135_size60270:38375..44486 + |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1135_size60270:38375..44486+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold1135_size60270-snap-gene-0.10 ID=maker-scaffold1135_size60270-snap-gene-0.10|Name=neural proliferation differentiation and control protein 1 isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=6112bp|location=Sequence derived from alignment at scaffold1135_size60270:38375..44486+ (Tigriopus kingsejongensis)
ATGTACTCGAAGAGCGATCCCATCTGGAACTTGTTGGTCCACGGTCCTGA
AGTGCCAGTGGAACTCCTTCACCAGCATCTTGAGAGGTTCATGATCATGA
TGGTCCTCTTTGGCCAGCTTTCGAAGCTCTGGACCAGCCCATTGGGATCG
AGTCAGACCTCGGCGAGGTGGACGAGAAAGAGAGTTCCTGGGATAGATGA
TAATTTCATAATTGTACATATTACTGTATATGCAATTCGCTGGCAATTGT
GCCATATGTTCATATGCCAATCAAAAGCAAAAACAGTCTTGTGAAAGTCC
CAAAGACCGAATAAGTAGTCAAAAGTGCCGAAAGAAGAAGTTGCTTATGG
TATTAAAAACCTAACGAACGCTGCTAAAATGGTTGGAAATGCTAAAAGTT
GCCTTGTAGGGTGCAAATTCCATGTTCCAGTTTTTCCGAGCTCCACTCAT
TATGATCCAAAACAAACACTTGTGTGGTACTTGGTGATAAGCTTTTTGCA
CTTTGACAGCAACTTCGAGATAGTTCAATATTTCGAAAAAACTTTCACAG
AATATAGGTAAAGTAGTACAGTACAGTCAGGCCATTATCATTACCATTAT
CCTAATTAAGCTTCGATCGCCCACTAATTGAGAGCGTGAGGACAGCTCTC
ACTCATTTGGCTAACGAGCCCAGCAGGCAATTCAATGAAAACCTTCTTGA
ATGGAAGCTCAACTACATTTACAGTTGTAAAAAAGGGGATCAGACAGTAC
CGTTTCTCATTCCACTTCGGCTCAATTATGAGATCACGGGCTTCGTCCCT
TTTTCTCCGTCCTCTTCATAGTGTCGATAATGTACGATATAATTCGTACA
AGTGGAGAAGATTTAAATAAGTGAATTGTTATAATACCGTTAAATACCAT
GCTAGAGCATATGAAAGAACTATTTGACATCATTGTATTCACAGCCCTCA
AAACGACTGTAAAATAAAAAGTGAGATGTTTTGGGAAGTTGTCCGATATT
AATGTCCGTCACACTGGCTCAAAAACAAGACATGAGGCCACCGGTTGCTT
GTTTAAGTTTAAAAGTGGTGGATTTTCACCCAACTCAGGTAATAGAAGAC
TCAAGTTCAAAATTATCCCCGCTCGCCTCTAGAGCCGAGAAGTCTTCCCG
TCTGATCCCTCTCTTTTGAGAAATTGTTGGTCCCACAATTTTGCAAACAC
CACACAGTTGGACTTATTCCCTTTCACCTCGCTTTTCTCTATTGGATCCT
GGACAACTACAAACAAAGGCAAATCAATCCAAGAATGTGTCCCCGGTCCC
TTCCTTTCAGCCAAAAGTGATTGGATCGACCCCACAATTGATAAATTCCC
AAGCTTCACGCCAAAGATTTTCGGCCAAGCCAACAATGAGGTGGAATTCG
AAGAAGCATCCGTGGTTATTGGGATTGGGATGACCTCTAATCCAAAAGTG
TAGGACCATGGAAACAAGTACGAAACAAGTTCATGAGTTTTGGTCCCTAA
CCCTTCGATCCATAGAATACTTTCCGGCTGACCCGCTTTCATTCCACTCG
GCCAACCACAAGACTTGCACTTGAGGCAAGTCTTGATCAGCTTCATAAGC
ATTAGCAAGTAAGTGAATCTGTCACTCGCTCATCCCTCTTCACTAGGTTC
TAGCTATTCCCTGGCTCTTATGTACGTACGTAGTATAAGCTTCGGGACTT
GGAAACTGCACTCCAAGAGCTATTACCATGGTTTTGTACGGTTGGCGGAG
GATTTCAGTGGAAACGTCGATGAACAGCATCGACTCGGCATCGAATCTAT
ATTGGTATGAATGTTAATGCTGAATCGAATTGAGAGAGCTCAGGGGTTTC
AGCGAGCCTTGGAGGAACCATTCGGGGGCACATCCAAGTATTACCTTCTC
CTTTTCCTCGATTTCTGTGTGTGTATGTATAGGCTTGACCCTTGGCCTCT
TTACCCTTGACTATGTACATACGCCTAGGGATGTAGGTTACTTTTCGTAA
GTAATCGAGTTACTTACTCGAGGTCAAGCGTGAAAACAAAACACACACAT
TATTTTTGCAGTCAACGTTTTTTGGGAACTATCGAAATAAAAAAACAGAG
TTTTTTGCTCCCGTGAGCACTAAATTTGGATTTCCCGGGAAGAAATAAAA
AAATTGGAGGTTCCTGAAAATATTACATTCAGCTGAAAGTAATCCAATTG
ACAGGTTAGGTTAGGCAAGAAACCCAGCCACGAGTTATCTACAAAACAAC
TCAAATGGGCGAGGTTTGGTTGCCAGACACAATGAATTGGCAAGATCAAA
ATGCGACCTTCGCCCTGGAAGGATGCTCGAATTCGAATTGACCGGAGAGG
CTTTTATCATGTTAAATTCGAAAATGGCATTTAGTGGGATTGACTTTAAA
CGCAATCAGTAATAATCATATTAATTTCGCTTAACTTGGATAAAGTGTTT
TTTTTTGTAAAATTAGAAAGAAACCATGATGAACAATCCGAGAGACAGGA
GGGCCATTTTTTGTAATTTATTCGAATCAAGTCTTAAAGAGCAAACATTA
CATCATACCAAACTTAACCACAACCAAAATGCGAGGAAGCGCGCCCAAAA
GAATTGTGCTGATCCTTGGCTAAACGGAGAAAAGTGCATTTAAGTTCAGC
CTTGACAAAATCTTTGAAAAAAACGTATTTCATGCCCCTCGACACCTCTC
CTCGGAATGTGTAAACACACATTTTATGTCACTTATGGCTCAATCAAAAG
GTGGGACATGTCCAAACTGATTCATTTCATTTTGGTCGAGAAGGTGACAC
GAAAGCTTTGTCGGATTGGGTGCTCTTCAGCTCAACCTTCCATGATGACT
ATCAAGCGAGTGGGAAGGCCAGGAGACGGGGAATAAATCATAGGGGCAGC
CCCAGAGTTGGTGACCCTATTCTTCCCGCTCGACAACGAGTTGCTCCCAC
CATTGTGGGGAACCTTTTCCCATGTGCGTCCGTGCAGTGTGTGCACACGC
AATGATGTACCCTCCAACTTGCTATCCATCCGGTGTGAGCGCCTTTTACG
AATAATATGTACAGTTGGTCGAGGGGAGCGAGATCTGTGGAATGCGAGCT
GGGCGGCTTTCTCCCGGCTGAGCATTTCCCATTGGGAGAAAGTCGCTCGC
CAATCATCTCAATGGCCATCTGGGCCTAAACTGGGCCTTCCCCTTGGTCC
ATGGCGCGAGGCCTGCCCTAAGTGCAGAGATTCCCACCGATAACGACTCA
TTGGTTTGGCGGCCGAACCGGACTTGCACACATTTCTCATCGACATACCG
TACACAAAGACAGAGCGAGCGGTGGCGAGGGGGTCCAATGGGCCCCAACC
AAGCTGGAAACAGAGATATGACATGACTCGAGCCAAGATAAGAACCTATT
CTGGTTCTCTCTCTCTCTCTCTCTCTCTGGCAATGCTTCTCCCTCTTGAA
GGAGTTTCTTCCACACGCTCTTCTCTGTGTTCCGTTCAGGTTCCAAGTGG
AACTGGCCTGGCGTGAAGAGTGCCAGGAGGAAGGAGGTGTTTGGAAGGGC
TTTGATCTTCCTGACAGTCTAGTATCCTCCGTGGCTATGACAAGAAGCAC
ACAATGGAGACTGGTGCCGGAGATTGCACTGATTGTGTTGGTCGTTGTAC
AAGAGGGCTGGGCTGATCCCGAGACCGTGGATGGACTGCTCCTCACCAAG
AAATCCCAACCCGGTGTCATACCCGTCAACTTCCCCAACAATCTTGGCTG
GAGTCCCAGGATCCACGAGCACGTCGCTATAAATCAATACCCGCCTCCAG
CCCCACTGGGCCACCAGAGCTGGGCAACCCAATTCCGAGTGCCACCTACT
CCCCACTCTGCGCCGCATCAGATTCGAAATGGACCGTTTATACCATCCCA
CCAGATTCCTCCCGGCGAGCACGAGTCACCGCCCAATGTCAAGAAACCAA
ATTCCATCCCAAACTTCCCCAATCAACCGGTCATCAATTGGTTCAAGCCC
ATGCATGCCAACTTCCCGGCTCCCCGTCCCGGAGTCCTCGGTTCGCACGA
GTTGGAGGTCAAGGTTTGGACCGCCACGCCTCAGCCCCGCGACATCAAGC
CGGGCGAGGGGCTCAAGAGCTTCAGTCCCACCATGGCTGCCCTTACTATG
CACCCCCATGTGAGTCCAGCCACGAATCCAGGGGCCTCAACCGCGGTTCC
CCGTGCAATACCCGACGGTCCCCGCGTCGAGCAGGACCTGAACCAGCTGC
AGCAACTGAAAGAGGAGACGCAGACTCCCTCAGTTCTAACGGCTCCCAAG
CCGCCTCAGGCCAAGAAGGAAATGGAACAGGTCCAGGCGCCAGCACCTCA
GATTGAGCCTCGCTCCAGCTACCTGAAAGACGCCCGTAGTGAGGCGGCCT
TCGAGCCCTTCGGCATGGGCTCCCGGACGGATGCCTTCACGGGTGGGGAT
AGACACAAGGCCATCCTCGGGCTGGTCATCGGTATCGTCTTCGTGACCGC
CTTCGTCGCCATGGGCATCGGCCTGGCGGCCCAATGCGTGGCCGATCGGG
TCAAGCTGATGAAGGACAAGAGCGTCTTGGGCCGCATGCGCAGTCCCAAT
GGCGACGACGAGACGCCGCCCGAGCTGAACGGATCCGTGCCCTTCGGATC
TTCGCCCTGCGACCGATCCCCGAGCGACGCCCGAAATGGAAAGATGTCGA
ACATGAACCCGGTGAGTCGAGCTTAGCGGGAAATCCCCTTCAAATCGATT
AGAGCTATTTCCTCGGACTAACGTCACTCTTTGTCACTTGACCTTTTCTG
TTATTTCGGAAACCTCGATCCTTGGCGTTCCGTCATCTGCATAATTAAAT
TTGGATCCCGCATATCCCAATAGTTGCCAGCCTCAGGTGGACGCATCGGA
TAGATGATGGATGATTGAATCTTTGGGGGGAGGCGGAGAAGGTCACCACT
CGTCGCTCTCCCTTAGTAGTAGTTTGTGATGTCCACGCTCGAGTCTGAAT
TGGAACCTCAATGGCACTCACCCCGATGCTGTGGCACGTCCCTCGGGATT
GCCGGGCCTCTTCGTCGTCGCACCACGCTAAACGTGTTGCCATAAAGTTT
GTGGAACTTTGGAATGCCTCACAGGGATTGCATTATGGTCCCACTAGGAT
TGGAAGCACGAACCCCTAGAGTTGACGGCGGGCTTTATTTGCACAAAATG
TATCCTTTTGCTCCGTCTATGTACCTACAATCCCATACAAGAAGTTAGAC
AATTCTAGTCTAGGTTCTAAGGATATGAGGGTTTCAAGTTAGATGGGTGT
GAGTGTGTGTAGTAAGGGCGGCCGATAACGAGACCCTTTTCAGTAAAATT
GGATTGGAATTGACTCAAAGAGGAGCGAGTTTTTGGCGGTTGGAAAAAAC
CACGTGCGTCATCTTCGTTATGGATCGACTCTCAATGGTGATTGTTAGAT
ACGGTTCACTAGACCTCAATGGGGATCTGTCTCTTTATTATGACATGTTA
ACCACTTGATTCACCGGCATGGGGAGGGGGGACAAAATGGCGCTGAAGGA
GACTCGTCAAGCTTTTAAAGGCGACTCGGCCATGGTACGTGGGTGGATAC
CCTTGAAAGAGATATCGGGGAGATCATGTTTCCCCTTCAATCCGAGAAAT
GGCTTTCTTGTCTTGGACTTGGAGCGCATCTTCAATTGGATCTTTAATTT
TCAGCCTCTGTTCACCGGCAAACTCATCCTCCACGATCCTCCTGGTTTGA
GCTCCTCAGCGTTGTGCCGCACCACGGCGGCGGCGGCCAGCAAAATGACC
AACACCTTGTTTGCGGCTCAACAGGCGGTGATCATGCCCAGTCCCGCCGA
GCAAGTGACCGACGACCTCATCAGCCCCAAATACGACACGGACGACTGCA
GTGAGAATGAGGACGACAGCGACGACACTGTCTACGAGTGCCCGGGACTG
GCCGCCAACGCCACGGCCATGGAGGAGATGGTGGTGAAGAACCCCTTCTA
CTTGCAAGGGGGCGAGATTGGGCTGAGGCCCACTTTGGCCAACTCCAGCG
ATCCCCAACCCATCTCGTCGCAGAGCAGCATCTTCCATCACGGGATAAAG
GGCGCCAACTAG back to top
Synonyms
The feature 'neural proliferation differentiation and control protein 1 isoform x1' has the following synonyms
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