peritrophin A , maker-scaffold1175_size57176-snap-gene-0.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of peritrophin A vs. L. salmonis genes
Match: EMLSAG00000006166 (supercontig:LSalAtl2s:LSalAtl2s336:600222:602036:-1 gene:EMLSAG00000006166 transcript:EMLSAT00000006166 description:"maker-LSalAtl2s336-snap-gene-6.54") HSP 1 Score: 50.0618 bits (118), Expect = 4.142e-8 Identity = 47/170 (27.65%), Postives = 70/170 (41.18%), Query Frame = 0 Query: 12 MSKYLIFSVCLATLS-AQALAVPDCAAN-------GFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHT---YCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDDGFFEFEPCST--YFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGCARQ 168 M K + F++ A+L+ +Q + P A+N GFF D C Y++C +C LFD + CDYP V+CG R + D PT P C +GFF E + F +C G + C L+F+ LG C + A++ Sbjct: 1 MKKKIQFTLSFASLALSQDVPEPQAASNFKCPEKNGFFSDLEQCDLYFECVDNIPEAKLCPDGLLFDDTNPNVEKCDYPFNVECGTREFVQEPD----------PTSDPRCYRA---NGFFNHEEPTECGKFYNCVHGKAHELPCATPLVFDEALGTCVREEQATEFAKK 157
BLAST of peritrophin A vs. L. salmonis genes
Match: EMLSAG00000003899 (supercontig:LSalAtl2s:LSalAtl2s210:633257:634024:-1 gene:EMLSAG00000003899 transcript:EMLSAT00000003899 description:"snap_masked-LSalAtl2s210-processed-gene-5.16") HSP 1 Score: 47.3654 bits (111), Expect = 3.556e-7 Identity = 42/152 (27.63%), Postives = 60/152 (39.47%), Query Frame = 0 Query: 15 YLIFSVCLATLSAQALAVPDCAANGFFPDDTNCRFYYDCEQGEALRVICEADWLFD---VVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDDGFFEFEPCST--YFCHCSVGHPYLEECQDGLIFNPELGGCDWDYN 161 YL++ + + + Q P+ NG F D C YY CE+G + R +C+ LFD C P VDCGDR + E E +G F+ S F CS G + C + L+F+ +G C N Sbjct: 8 YLLY-LTTSLVLGQEFQCPE--TNGIFADSEQCDLYYVCEKGVSFRRLCDDGLLFDDSIRNREKCVLPHNVDCGDREFVQEPAEGIDEGCERA-------------NGIFDVIDPSVCDKFISCSNGTSHELPCTNPLVFDSVIGSCVRKEN 143
BLAST of peritrophin A vs. L. salmonis genes
Match: EMLSAG00000011072 (supercontig:LSalAtl2s:LSalAtl2s749:111718:116026:1 gene:EMLSAG00000011072 transcript:EMLSAT00000011072 description:"augustus_masked-LSalAtl2s749-processed-gene-1.0") HSP 1 Score: 47.7506 bits (112), Expect = 4.052e-7 Identity = 38/143 (26.57%), Postives = 54/143 (37.76%), Query Frame = 0 Query: 38 NGFFPDDTNCRFYYDCEQGEALRVICEADWLFD----VVHTYCDYPDRVD--CGDRPLCDQ---NDENCQEHHVSTPTPLP-ECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDW--DYNVEGCARQ 168 NG F C Y+ C G R +CE +FD CD+ C +P + D C + P+P P EC F C G L+ C +GL F+P+LG C W + +GC+ + Sbjct: 32 NGIFEHPEQCDRYFKCRNGALTRKLCEDGLVFDPDKVTSEDPCDHKQNTKHKCRGKPKLQKPKPGDGYCPRQNGVYPSPNPSECE----------------KFYSCLKGVGSLQVCANGLHFDPDLGTCVWXREXGRKGCSSE 158
BLAST of peritrophin A vs. SwissProt
Match: gi|259016203|sp|A8XWX5.2|CPG2_CAEBR (RecName: Full=Chondroitin proteoglycan 2; Flags: Precursor) HSP 1 Score: 53.1434 bits (126), Expect = 1.525e-7 Identity = 40/133 (30.08%), Postives = 57/133 (42.86%), Query Frame = 0 Query: 34 DCAANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYP-DRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGC 165 D A+G +P+ + C G A + C A +F+ CD+P D +C H +STP P+ C DDG+F F CS+ F C+ G + C GL F+ CD+D V C Sbjct: 221 DGKADGIYPNGVCVPNFLTCSGGIARVMNCPASLIFNPDILVCDWPRDVAEC---------------HGLSTPAPV------CEDDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSQANQRCDYDDLVNEC 332
BLAST of peritrophin A vs. SwissProt
Match: gi|33860139|sp|P41996.3|CPG2_CAEEL (RecName: Full=Chondroitin proteoglycan-2; AltName: Full=Cytokinesis protein B0280.5; Flags: Precursor) HSP 1 Score: 53.1434 bits (126), Expect = 1.672e-7 Identity = 38/130 (29.23%), Postives = 54/130 (41.54%), Query Frame = 0 Query: 37 ANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYP-DRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGC 165 A+G P+ + C G A + C A +F+ CD+P D +C PTP P TC +DG+F F CS+ F C+ G + C GL F+ CD++ NV C Sbjct: 251 ADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----------------AGLPTPQP----TCEEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
BLAST of peritrophin A vs. nr
Match: gi|1325329693|ref|XP_023346713.1| (protein obstructor-E-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 95.5153 bits (236), Expect = 8.784e-21 Identity = 52/136 (38.24%), Postives = 70/136 (51.47%), Query Frame = 0 Query: 36 AANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPL------PECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGC 165 A +G+F D+ NCR Y+ C G IC LFD VH +CD+ DRV+CGDRP+C D++C+ PT C C +DG F C FC C G Y++ C+ L+FN CD+ +NV C Sbjct: 123 AGDGWFADEFNCRKYWHCFGGVGDHSICPQGQLFDPVHVWCDWADRVECGDRPICGVCDDDCETTTSHKPTTWGPTTTQGSCKHVCKEDGLFSEGCCENTFCQCFGGIGYVQHCETNLVFNDVTHTCDFQFNVPCC 258
BLAST of peritrophin A vs. nr
Match: gi|1325329691|ref|XP_023346712.1| (protein obstructor-E-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 95.5153 bits (236), Expect = 1.160e-20 Identity = 52/136 (38.24%), Postives = 70/136 (51.47%), Query Frame = 0 Query: 36 AANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPL------PECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGC 165 A +G+F D+ NCR Y+ C G IC LFD VH +CD+ DRV+CGDRP+C D++C+ PT C C +DG F C FC C G Y++ C+ L+FN CD+ +NV C Sbjct: 133 AGDGWFADEFNCRKYWHCFGGVGDHSICPQGQLFDPVHVWCDWADRVECGDRPICGVCDDDCETTTSHKPTTWGPTTTQGSCKHVCKEDGLFSEGCCENTFCQCFGGIGYVQHCETNLVFNDVTHTCDFQFNVPCC 268
BLAST of peritrophin A vs. nr
Match: gi|926643573|ref|XP_013788018.1| (protein obstructor-E-like [Limulus polyphemus]) HSP 1 Score: 80.4925 bits (197), Expect = 9.114e-16 Identity = 45/135 (33.33%), Postives = 61/135 (45.19%), Query Frame = 0 Query: 36 AANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDV---VHTYCDYPDRVDCGDRPLCD--QNDENCQEHHVSTPTPLPECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGC 165 + G++PD C YY C G+ + +C+ ++F + +++ CDYP VDCGDR Q +NC G F E YF C G PY+ EC GL+F P G C W NV GC Sbjct: 47 SKEGYYPDPKQCDKYYRCRDGKPIEHLCDDGYVFPIKNPLYSRCDYPFNVDCGDRTELQPAQGSKNCPRKF-----------------GIFIHELKCNYFKQCVNGKPYIRECSQGLVFEPSSGSCSWPRNVVGC 164
BLAST of peritrophin A vs. nr
Match: gi|1325286535|ref|XP_023327994.1| (probable chitinase 10 [Eurytemora affinis]) HSP 1 Score: 79.7221 bits (195), Expect = 3.672e-15 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 0 Query: 38 NGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPT---PLPECSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYN 161 +G + D NCR Y++ E G + C+ D++FD + +CD+PDRVDC DR +CD D++C ST T P C+ C DG F C FC C G + CQ L F+ ++ C W Y+ Sbjct: 99 DGLYADPYNCRQYWNVEDGVGIEQTCDEDYVFDEQNKWCDFPDRVDCKDRLICDDCDKHCHASVPSTSTTEDPDIFCTPFCKGDGDFAMGCCLDRFCKCWQGVGKVILCQPTLQFDEDVDQCVWPYD 225
BLAST of peritrophin A vs. nr
Match: gi|1325263397|ref|XP_023333739.1| (uncharacterized protein LOC111705422 [Eurytemora affinis]) HSP 1 Score: 75.0998 bits (183), Expect = 7.405e-13 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 37 ANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCT--DDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPE 152 +G+FPD NCR Y+ C E + C +FD V+ +CD P RV+CGDRP+CD D NC E STP P + C+ +DG++ + + C+ GH C L+++P+ Sbjct: 120 GDGYFPDPYNCRKYWHCYDNEPEHITCADGLVFDEVNIWCDEPGRVNCGDRPICDDCDLNCYE--PSTPKPDCGHQLDCSKLEDGYYADDYNCRRYWQCTGGHGIHNSCDGDLLYDPD 235 HSP 2 Score: 68.1662 bits (165), Expect = 2.166e-10 Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0 Query: 9 AITMSKYLIFSVCLATLSAQALAVPDCA--------ANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQ 98 +T I C + Q PDC G++PD NCR ++ C+Q V C+ ++L+D + CD PDRV+CG RP+CD+ DENC+ Sbjct: 244 KVTCGDRPICGECEEDCAPQPTGPPDCGHIMDCTGVPTGYYPDPFNCRKFWICDQDIGTHVTCDKNYLYDEKNIACDLPDRVNCGGRPVCDECDENCE 341 HSP 3 Score: 61.2326 bits (147), Expect = 6.341e-8 Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0 Query: 38 NGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECS 112 +G++ DD NCR Y+ C G + C+ D L+D H +C+ D+V CGDRP+C + +E+C PT P+C Sbjct: 201 DGYYADDYNCRRYWQCTGGHGIHNSCDGDLLYDPDHVWCETSDKVTCGDRPICGECEEDC----APQPTGPPDCG 271
BLAST of peritrophin A vs. nr
Match: gi|241731250|ref|XP_002413846.1| (peritrophin A, putative [Ixodes scapularis] >gi|215507662|gb|EEC17154.1| peritrophin A, putative [Ixodes scapularis]) HSP 1 Score: 72.0182 bits (175), Expect = 1.298e-12 Identity = 52/167 (31.14%), Postives = 73/167 (43.71%), Query Frame = 0 Query: 9 AITMSKYLIFSVCLATLSAQALAVPDC-AANGFFPDDTNCRFYYDCEQGEALRVICEADWLF---DVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDDGFFEFE---PCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGCARQ 168 A T + V L T L C + NGFFPD C YY+C +G A +C F + ++ CD+ VDC RP ++ P+C +G+F E C+ ++ CS G P CQ GL FNP++GGC+W V GC + Sbjct: 2 APTSTLLAFLGVLLGTALVCVLGEFVCPSKNGFFPDPEQCDMYYECRKGVAKPKLCGDGMAFLDNNPLYARCDFLSNVDCSKRP------------YLQEAKSTPKCPRA---NGYFPHEDPQNCAEFY-TCSNGVPSKLNCQKGLAFNPQVGGCEWAGRVPGCEHE 152
BLAST of peritrophin A vs. nr
Match: gi|1238841118|ref|XP_022239318.1| (protein obstructor-E-like [Limulus polyphemus]) HSP 1 Score: 72.4034 bits (176), Expect = 2.364e-12 Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 0 Query: 17 IFSVCLATLSAQALAVPDC-AANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVV---HTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDD-GFFEFEPCS---TYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGCARQ 168 +FS + + A C +++GF+PD C YY+C G+ ++ +CE ++F+V+ ++ CDYP V+C +R +E + P+P C G F+ +P +YF C G CQDGL F+P G C W + V GC ++ Sbjct: 6 LFSFVILQVMTLASCQFQCPSSSGFYPDTVYCDKYYECRGGKPIQRLCEDGYVFNVISPLYSRCDYPFNVECRNR----------EERQPAQPSPY------CPRRFGLFQ-DPNPGNCSYFWQCVNGRATSHRCQDGLAFHPRKGNCHWSHTVPGCEQK 148
BLAST of peritrophin A vs. nr
Match: gi|37983093|gb|AAR06266.1| (peritrophic membrane chitin binding protein 2 [Trichoplusia ni]) HSP 1 Score: 72.7886 bits (177), Expect = 7.182e-12 Identity = 47/154 (30.52%), Postives = 71/154 (46.10%), Query Frame = 0 Query: 27 AQALAVPDCAANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVST----------------PTPLPE-CSITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVE 163 AQ + + A+ NC +Y C G + V C+ + L+D V C++PD+VDCGDRP+ D +D +C + P+ P C+ ++ F E C+ ++ CS G P C GL++NP CDW NVE Sbjct: 34 AQQICEANYGADNILIAHENCDKFYQCANGRPVAVSCQGNLLYDPVLEVCNWPDKVDCGDRPISDGSDSDCDGNSPGDNDNDQDNDNDGTCNCDPSEAPSVCAAEDSEGVFVAHENCNQFYV-CSGGKPQALVCPAGLLYNPYERDCDWPENVE 186 HSP 2 Score: 64.6994 bits (156), Expect = 5.411e-9 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0 Query: 36 AANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTP--------TPLPECSITCTDDG----FFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNV 162 ++G NC +Y C+ G + C A+ L++ CD+ D VDCG+RP+ D +D+N + P P SI C D G E C+ Y+ CS G P C +GL+FNP GCDW NV Sbjct: 844 GSSGVLIAHENCNQFYKCDNGVPVAFRCSANLLYNPYKEECDWADNVDCGNRPISDPDDDNNGSDNNPVPDDNQDINDDPSQAPSI-CADSGSEGVLVAHENCNQYYI-CSAGEPLAMSCSNGLLFNPVTWGCDWPQNV 980
BLAST of peritrophin A vs. nr
Match: gi|1238892532|ref|XP_022257868.1| (probable endochitinase [Limulus polyphemus]) HSP 1 Score: 69.707 bits (169), Expect = 7.827e-12 Identity = 47/154 (30.52%), Postives = 68/154 (44.16%), Query Frame = 0 Query: 16 LIFSVC-LATLSAQALAVPD--------CAANGFFPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECS--ITCTDDGFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDW 158 +I VC L ++ +L VP+ G+FP NC YY C Q + C +D L+ C+ P+ VDCGD+ + Q S+ TP + I + G F YF C+ G P+L+ C GL F+P L C+W Sbjct: 11 VILPVCNLHSIHGLSLVVPENEDEPFVCPVERGYFPHPKNCHQYYLCFQSKPYLETCPSDLLYLESEAMCELPNFVDCGDKINPTKTSSTQQPGKTSSKTPYSTKTPFICPSYYGLFSHPREKKYFYQCAHGFPHLKLCPSGLEFDPNLKVCNW 164
BLAST of peritrophin A vs. nr
Match: gi|1022778069|gb|KZS21563.1| (putative Peritrophic matrix protein [Daphnia magna]) HSP 1 Score: 71.2478 bits (173), Expect = 2.699e-11 Identity = 49/127 (38.58%), Postives = 61/127 (48.03%), Query Frame = 0 Query: 41 FPDDTNCRFYYDCEQGEALRVICEADWLFDVVHTYCDYPDRVDC-GDRPLCDQNDENCQEHHVSTPTPLPECSITCTDD-GFFEFEPCSTYFCHCSVGHPYLEECQDGLIFNPELGGCDWDYNVEGC 165 FPD+ + RFY C QG A C D++FD V C P+ VDC + E Q +S T P C +D GF+ T F C+ G PYL+ C DGL FNPE CD+ NV C Sbjct: 263 FPDECSNRFY-SCVQGVANENFCPGDFIFDPVRGICAAPETVDCYQSSTTNSKTTETTQRQTISATTVQPPVEFVCPEDYGFYPNPENCTTFYQCTGGKPYLKSCPDGLYFNPETIYCDYLDNVPSC 388 HSP 2 Score: 57.7658 bits (138), Expect = 9.753e-7 Identity = 39/125 (31.20%), Postives = 52/125 (41.60%), Query Frame = 0 Query: 35 CAANGFFPDDTNCRFYYDCE-QGEALRVICEADWLFDVVHTYCDYPDRVDCGDRPLCDQNDENCQEHHVSTPTPLPECSITCTDDGFFEFEP--CSTYFCHCSVGHPYLEECQDGLIFNPELGGC 156 C ++G +P C YY C A C L+D++H C+ P CGDR + +++ E S C DDGFF P CS F +C G YL+ C IF P C Sbjct: 60 CPSDGVWPHPFQCDLYYTCYLDNPAYLWKCRDSLLYDLLHGSCNLPSLTICGDR---------VRSGIIASSPTATEPSFMCPDDGFFPISPDACSIEFFNCVEGIAYLQTCPGSGIFEPSQSTC 175 The following BLAST results are available for this feature:
BLAST of peritrophin A vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of peritrophin A vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of peritrophin A vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1175_size57176:41073..45253- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1175_size57176-snap-gene-0.8 ID=maker-scaffold1175_size57176-snap-gene-0.8|Name=peritrophin A |organism=Tigriopus kingsejongensis|type=gene|length=4181bp|location=Sequence derived from alignment at scaffold1175_size57176:41073..45253- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'peritrophin A ' has the following synonyms
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