abc transporter, maker-scaffold1183_size56743-snap-gene-0.1 (gene) Tigriopus kingsejongensis

Overview


Name	abc transporter
Unique Name	maker-scaffold1183_size56743-snap-gene-0.1
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 98.9821 bits (245), Expect = 1.367e-23
Identity = 48/103 (46.60%), Postives = 72/103 (69.90%), Query Frame = 0

Query:  162 IAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQ 264
            I Y+ Q+P++F  ++ ENIR G P A++ EV   A+ A + + +    DG +  +G++G  +SGG++QR+AIARAL+K  PILILDEATSALD  +E +I Q+
Sbjct:  513 IGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESE-RIVQE 614

HSP 2 Score: 64.6994 bits (156), Expect = 5.160e-12
Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = 0

Query:   15 RHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVD-----------INLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKN 144
            R  AI Y+ Q+  +  T+V +N++   PNA D+E ++A   A VD             L      +SGGQ+QR+A+A   L    I +LDE TSALD ++   + + L + ++   +T +++ H     + AD I  + K 
Sbjct:  509 RGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSK--GRTSLVIAHRLSTIKNADVIAVIDKG 647

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 91.2781 bits (225), Expect = 5.827e-21
Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = 0

Query:  153 IPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGS 270
            +  D L + I+ V QD ++F  T+  NI+ GN   S+ +V   A+ A++   I     G    VG++G +LSGGE+QRVAIARA +K +PI+I DEATS+LD +TE  I +  + + S
Sbjct:  431 VTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTS 548

HSP 2 Score: 66.6254 bits (161), Expect = 1.165e-12
Identity = 47/151 (31.13%), Postives = 68/151 (45.03%), Query Frame = 0

Query:    2 LGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVD-----------INLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141
            +G+Y ++ +T  S    I  VPQD  +   T+  N++    N  D + +    LAE+D             +      LSGG++QRVA+A   L  + I + DE TS+LD  T   IMK L        KT I++ H       AD I  L
Sbjct:  423 IGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTS--GKTAIIIAHRLSTVVHADEIFVL 571

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 77.411 bits (189), Expect = 2.817e-16
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLG-NPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTE 258
            L  HI  V Q+P++F  ++ ENI +G   E S   ++   + A   + I       +  VG+KG+ LSGG++QR+AIARALI+   IL+LDEA+SALD  +E
Sbjct:  319 LRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSE 420

HSP 2 Score: 53.5286 bits (127), Expect = 2.071e-8
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0

Query:   66 ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQ 142
             +LLSGGQ+QR+A+A   +   SI LLDE +SALD ++   +   L +   ++ +T I+V H     + AD IL ++
Sbjct:  382 GALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDK--ARKGRTTIIVAHRLSTIRSADAILVMK 456

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 73.559 bits (179), Expect = 5.670e-15
Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFAR--QAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ 263
            L + +  + Q+P++F+GTL  N+   +PE + ++ +++       L E I    DG+N S+ + G  LS G+RQ + +ARAL++   ILILDEAT+A+D  T++KI +
Sbjct: 1232 LRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQE 1336

HSP 2 Score: 54.6842 bits (130), Expect = 1.128e-8
Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 0

Query:  161 HIAYVAQDPIIFTGTLAENIRLGNP---EASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALD 254
             IAYV Q+  +   +L  NI  G P   E  N  +E       LS L   +GD     +G++G  LSGG+RQR+++ARA+   A + I D   SALD
Sbjct:  617 QIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYCCLTYDLSLLP--AGD--ETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALD 709

HSP 3 Score: 54.6842 bits (130), Expect = 1.223e-8
Identity = 48/177 (27.12%), Postives = 75/177 (42.37%), Query Frame = 0

Query:   19 IRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLL---------------SGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNL--TEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDILIQHIAYVAQDPIIFTGTLAE 178
            I YVPQ+  +  T+++ N+    P   D E+++ +        L YD SLL               SGGQ+QR++LA    + A +++ D P SALD +   S+  N+        ++KT ++VTH                         I Y   + HIA + +  II  GT  E
Sbjct:  618 IAYVPQESWMQNTSLKNNILFGKPY--DEEWYNQVLEY---CCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTH------------------------GISYLPHVHHIAVMLKGEIIHEGTYQE 765

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 68.5514 bits (166), Expect = 3.012e-13
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 0

Query:  149 DEENIPY---DILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFA--RQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            D ENI +     L   I  + QDPI+F+G+L  N+   +P  + A+ +++     + L   +   GDG+N SV + G  LS G+RQ + +ARA+++K  IL+LDEAT+A+D  T+  I
Sbjct: 1341 DGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNL---DPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLI 1455

HSP 2 Score: 50.8322 bits (120), Expect = 1.963e-7
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0

Query:   69 LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNL--TEFAQKENKTIIMVTHDAELAQRADFILTLQ 142
            LSGGQ+ RV+LA    N   I++LD+P SA+D      + +N+  ++    +NKT I VTH A    + D I+ ++
Sbjct:  742 LSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMK 817

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 67.3958 bits (163), Expect = 7.405e-13
Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLGNP--EASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ--QTQALGSTVI 273
            L   I  + QDP++F+G+L  N+   +P  E +   +      + L   ID   DG+   V + G  LS G+RQ + +ARAL+++  +LILDEAT+A+D  T+  I +  +++   STVI
Sbjct: 1393 LRSRITIIPQDPVLFSGSLRRNL---DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVI 1509

HSP 2 Score: 55.4546 bits (132), Expect = 5.883e-9
Identity = 47/171 (27.49%), Postives = 84/171 (49.12%), Query Frame = 0

Query:   92 LDEPTSALDKKTALSIMKNLTEFAQKENKTIIM-VTHDAELAQRADFILTLQK------NAQLQDEENIPYDILIQ-HIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALD 254
            +++ T+  D K A+++ K   ++   E+K I+  V+ D E+      + T+        +A L + + +   I ++  IAY AQ   +   +L  NI L N      +         L   +D+   G    +G+KG  LSGG++QRV++ARA+   + I +LD+  SA+D
Sbjct:  623 VEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRGSIAYGAQQAWVLNTSLKNNI-LFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVD 792

HSP 3 Score: 50.447 bits (119), Expect = 2.721e-7
Identity = 41/137 (29.93%), Postives = 68/137 (49.64%), Query Frame = 0

Query:   18 AIRYVPQDIGVLKTTVRQNLQLTAPNACD--SEFFDALAL-AEVDINLDYDASL-------LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQK--ENKTIIMVTHDAELAQRADFILTLQ 142
            +I Y  Q   VL T+++ N+        D  +   +A AL +++D+    D +        LSGGQ+QRV+LA    + + I+LLD+P SA+D      I  N+   +    ++KT +MVTH        D I+ ++
Sbjct:  700 SIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMK 836

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1")

HSP 1 Score: 65.855 bits (159), Expect = 1.705e-12
Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 0

Query:   19 IRYVPQDIGVLKT-TVRQNLQLTAPNACDSEFFDALALAEVD--------------INLDYD-ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDE 150
            I Y+PQ+I + K  TVR+ L+          +F  L   E D              I  D D    LSGGQ++RV+ A+  L+   +++LDEPT  +D +   SI  +LT+ A    KTI++ TH  E A++A  I  L +N +L  E
Sbjct:  106 IGYMPQEIALYKEFTVRETLK----------YFGRLYEMETDQIDQRIDFILKFLQITRDRDMVGKLSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKKTILITTHYIEEARQATSI-GLMRNGKLLAE 242

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 65.4698 bits (158), Expect = 3.151e-12
Identity = 37/108 (34.26%), Postives = 65/108 (60.19%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFA--RQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ 263
            L   +  + QDP +F+GTL  N+   +P     ++EL    + A L +   L  DG+++ + + G  +S G+RQ + +ARAL++K  +LI+DEAT+A+D  T++ I +
Sbjct: 1824 LRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDF--LKEDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQK 1926

HSP 2 Score: 50.0618 bits (118), Expect = 3.455e-7
Identity = 44/149 (29.53%), Postives = 66/149 (44.30%), Query Frame = 0

Query:   16 HMAIRYVPQDIGVLKTTVRQNLQL----------TAPNAC----DSEFF---DALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKEN-----KTIIMVTHDAELAQRADFILTLQ 142
            H ++ Y PQ+  +   +V+ N+                AC    D E F   D+  + E  INL       SGGQ+QR++LA    +Q+ I+ LD+P + +D   A    K+L E     N     KT I+VTH+       D I  L+
Sbjct: 1211 HGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINL-------SGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVA----KHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLK 1348

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12")

HSP 1 Score: 65.0846 bits (157), Expect = 3.157e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLGN-PEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEAT 250
            L   I  V Q+P++F+GT+ ENI  G   +  + E+   A+++   + I    D  +  VG++G  LSGG++QRVAIA A++K    LILDEAT
Sbjct:  383 LRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4")

HSP 1 Score: 63.5438 bits (153), Expect = 1.254e-11
Identity = 35/106 (33.02%), Postives = 66/106 (62.26%), Query Frame = 0

Query:  160 QHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDL----SGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            +  A + QDP IF+GT+ +N+   +P A +++ EL+    +LS L ++       G++  +G  G  LS G++Q + +ARA+I  A ++ +DEAT+++D+ T++ I
Sbjct: 1293 RQFAVIPQDPFIFSGTIRQNL---DPYAQHSDQELW-DSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLI 1394

HSP 2 Score: 58.151 bits (139), Expect = 7.805e-10
Identity = 47/164 (28.66%), Postives = 82/164 (50.00%), Query Frame = 0

Query:    7 LSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEV------------DINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDIL 158
            L  L +  R  A+  +PQD  +   T+RQNL   A ++ D E +D++ L+ +            D  +      LS GQ+Q + LA   +  A +  +DE T+++DK+T   +++N+ + A  + KT+I + H  E    +D I  +  N Q+  EE  P D++
Sbjct: 1285 LLPLIDFRRQFAV--IPQDPFIFSGTIRQNLDPYAQHS-DQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETD-RLIRNVLKTAFND-KTVITIAHRIETVLNSDRIFVMS-NGQII-EEGKPEDLI 1441

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|123292983|sp|Q2J0F4.1|NDVA_RHOP2 (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA)

HSP 1 Score: 112.464 bits (280), Expect = 6.932e-27
Identity = 55/104 (52.88%), Postives = 79/104 (75.96%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            L ++I  V Q+ ++F  ++A+N+R+G P+A++AE+ L A +AQ  + I+ SG G N + G++G  LSGGERQR++IARAL+K  PILILDEATSALD VTE K+
Sbjct:  417 LRRNIGVVFQEALLFDRSIADNLRVGKPDATDAELRLAAERAQALDFIERSGLGFNTAAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKV 520

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|46396522|sp|Q9JXR3.1|MSBA_NEIMB (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 110.538 bits (275), Expect = 4.104e-26
Identity = 64/121 (52.89%), Postives = 80/121 (66.12%), Query Frame = 0

Query:  149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQ-AQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL 268
            D  +I  D L    A V+QD  +F  TL EN+R   P+A  AEV LFA Q A L  LID S  G++Q +G  GS LSGG+RQRVAIARA++K APIL+LDEATSALD  +E+ + Q  + L
Sbjct:  440 DIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEV-LFALQTANLQSLIDSSPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL 559

HSP 2 Score: 62.003 bits (149), Expect = 1.168e-9
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0

Query:   22 VPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDY-----------DASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141
            V QD+ +   T+ +N++ + P+A ++E   AL  A +   +D            + S LSGGQ+QRVA+A   L  A I LLDE TSALD ++   + + L      EN+T I+V H     + AD I+ +
Sbjct:  456 VSQDVFLFDDTLFENVRYSRPDAGEAEVLFALQTANLQSLIDSSPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLM--ENRTGIIVAHRLTTIEGADRIIVM 584

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|123749266|sp|Q13BH6.1|NDVA_RHOPS (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA)

HSP 1 Score: 109.383 bits (272), Expect = 7.716e-26
Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 0

Query:  149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            D   +    L ++I  V Q+ ++F  ++AEN+R+G P+A++AE+ L A +AQ  + ID +  G + + G++G  LSGGERQR++IARAL+K  PILILDEATSALD VTE K+
Sbjct:  408 DVRGLTMSGLRRNIGVVFQEALLFNRSIAENLRVGKPDATDAELRLAAERAQALDFIDRNDLGFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKV 520

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|81311132|sp|Q5F4X8.1|MSBA_NEIG1 (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 108.227 bits (269), Expect = 2.002e-25
Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0

Query:  149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL 268
            D  +I  D L    A V+QD  +F  TL EN+R   P+A  AEV    + A L  LID S  G++Q +G  GS LSGG+RQRVAIARA++K APIL+LDEATSALD  +E+ + Q  + L
Sbjct:  440 DIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL 559

HSP 2 Score: 63.5438 bits (153), Expect = 2.910e-10
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0

Query:   22 VPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLD-----------YDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141
            V QD+ +   T+ +N++ + P+A ++E   AL  A +   +D            + S LSGGQ+QRVA+A   L  A I LLDE TSALD ++   + + L      EN+T I+V H     + AD I+ +
Sbjct:  456 VSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL--MENRTGIIVAHRLTTVESADRIIVM 584

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|46396521|sp|Q9JW59.1|MSBA_NEIMA (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 108.227 bits (269), Expect = 2.330e-25
Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0

Query:  149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL 268
            D  +I  D L    A V+QD  +F  TL EN+R   P+A  AEV    + A L  LID S  G++Q +G  GS LSGG+RQRVAIARA++K APIL+LDEATSALD  +E+ + Q  + L
Sbjct:  440 DIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL 559

HSP 2 Score: 62.7734 bits (151), Expect = 6.021e-10
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0

Query:   22 VPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLD-----------YDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141
            V QD+ +   T+ +N++ + P+A ++E   AL  A +   +D            + S LSGGQ+QRVA+A   L  A I LLDE TSALD ++   + + L      EN+T I+V H     + AD I+ +
Sbjct:  456 VSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL--MENRTGIIVAHRLTTIEGADRIIVM 584

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|81841936|sp|Q89UT8.1|NDVA_BRADU (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA)

HSP 1 Score: 107.071 bits (266), Expect = 5.804e-25
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0

Query:  149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            D   +    L ++I  V Q+ ++F  ++AEN+R+G P+A+ AE+   A +AQ  E I+ SG G   + G++G  LSGGERQR++IARAL+K  PILILDEATSALD VTE K+
Sbjct:  403 DVRGVTLTSLRRNIGVVFQEALLFNRSIAENLRVGKPDATEAEMRKAAERAQALEFIERSG-GFETNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEVKV 514

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|148839579|sp|Q3SP57.2|NDVA_NITWN (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA)

HSP 1 Score: 105.916 bits (263), Expect = 1.564e-24
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 0

Query:  158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            L ++I  V Q+P++F  ++AEN+R+G P+A++ E+ L A +AQ  + I+      +   G++G  LSGGERQR++IARAL+K  PILILDEATSALD VTE K+
Sbjct:  417 LRRNIGVVFQEPLLFNRSIAENLRVGKPDATDEEMRLAAGRAQALDFIERGEKKFDTHAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKV 520

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|74996978|sp|Q54RU1.1|ABCB6_DICDI (RecName: Full=ABC transporter B family member 6; AltName: Full=ABC transporter ABCB.6)

HSP 1 Score: 104.76 bits (260), Expect = 3.906e-24
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0

Query:  162 IAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ 263
            I  V Q+ ++F  T+A NI  GN EA++ ++   +R+AQ+   I+ S DG    VG++G RLSGGE+QRV+IARAL+K  PILILDEA+S+LD  TE+KI Q
Sbjct:  502 IGVVPQETVLFNDTVAYNIGFGNREANDDQLIDASRRAQILSFIESSPDGFRTVVGERGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQ 603

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|82230024|sp|Q56A55.1|ABCB8_DANRE (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor)

HSP 1 Score: 103.99 bits (258), Expect = 8.174e-24
Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:  162 IAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261
            I +++Q+P++F  ++ ENIR G P A++AEV   A+QA     I    DG N  VG++G  LSGG++QR+AIARAL+K   ILILDEATSALD  +E+ +
Sbjct:  549 IGFISQEPVLFGTSVMENIRFGKPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVV 648

HSP 2 Score: 57.3806 bits (137), Expect = 4.322e-8
Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 0

Query:    1 MLGSYELSTL-TEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINL-----DYDASL------LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141
            ML   ++ TL     R   I ++ Q+  +  T+V +N++   P+A D+E   A   A     +      Y+  +      LSGGQ+QR+A+A   +   SI +LDE TSALD ++   + + L        +T++++ H     Q AD I  +
Sbjct:  530 MLDGLDIRTLDPSWLRGHVIGFISQEPVLFGTSVMENIRFGKPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVVQEALDR--ATTGRTVLIIAHRLSTIQAADLICVM 680

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|81859401|sp|Q9ZCM8.1|Y696_RICPR (RecName: Full=Putative export ATP-binding/permease protein RP696)

HSP 1 Score: 103.219 bits (256), Expect = 9.749e-24
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0

Query:  111 LTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL--GSTVI 273
            L  F ++EN TI++   D    +                    P DI  + IAYV Q+  IF+ T+  NI  GN +AS+ E+    +   + E      DGIN  +G+KG RLSGG++QR+AIARAL++K  IL+LDEA SALD ++EQK+    + +  G+ +I
Sbjct:  384 LLRFYRQENGTILINNQDISFVK--------------------PTDIR-KFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSTKLHDGINTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMKGNIII 527

HSP 2 Score: 55.8398 bits (133), Expect = 1.303e-7
Identity = 41/161 (25.47%), Postives = 75/161 (46.58%), Query Frame = 0

Query:   11 TEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASL--------------LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDI 157
            T++ + +A  YVPQ+  +   T++ N+      A D E  + + +  ++   ++   L              LSGGQ+QR+A+A   L +  I LLDE  SALD  +   ++  + +  +     II + H     + AD+IL + K   + +  +  YD+
Sbjct:  408 TDIRKFIA--YVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIE---EFSTKLHDGINTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMK--GNIIISIAHRISSIESADYILVIDKGGVVTEGSH--YDL 559

[Close]

BLAST of abc transporter vs. nr
Match: gi|499468006|ref|WP_011154646.1| (ABC transporter ATP-binding protein [Vibrio anguillarum] >gi|38638328|ref|NP_943560.1| putative ABC transporter (plasmid) [Vibrio anguillarum 775] >gi|29825763|gb|AAO92386.1| putative ABC transporter ATP-binding protein (plasmid) [Vibrio anguillarum] >gi|38155235|gb|AAR12534.1| putative ABC transporter (plasmid) [Vibrio anguillarum 775] >gi|537382739|gb|AGU59973.1| hypothetical protein N175_19415 (plasmid) [Vibrio anguillarum M3] >gi|644983561|emb|CDQ47881.1| putative ABC transporter (ATP-binding protein) (plasmid) [Vibrio anguillarum] >gi|1142919121|gb|AQL62655.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142922593|gb|AQL66124.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142926086|gb|AQL69614.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142930320|gb|AQL76442.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142936364|gb|AQL79884.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142946792|gb|AQL90291.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142957747|gb|AQM24978.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142963630|gb|AQM28356.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142988646|gb|AQL93985.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142992521|gb|AQL97494.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1142996495|gb|AQM01048.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1143004144|gb|AQM08061.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1143008081|gb|AQM11531.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1143012032|gb|AQM36321.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1145598944|gb|AQM65026.1| ABC transporter (plasmid) [Vibrio anguillarum] >gi|1241526896|gb|ATA51775.1| ABC transporter ATP-binding protein (plasmid) [Vibrio anguillarum])

HSP 1 Score: 310.457 bits (794), Expect = 1.391e-99
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1046611803|ref|WP_065681036.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1044038166|emb|SBS60596.1| Putative multidrug export ATP-binding/permease protein [Vibrio splendidus])

HSP 1 Score: 310.457 bits (794), Expect = 1.727e-99
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1330292086|ref|WP_102442272.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1326577135|gb|PMH71186.1| ABC transporter [Vibrio splendidus] >gi|1326746881|gb|PMJ26774.1| ABC transporter [Vibrio splendidus])

HSP 1 Score: 307.375 bits (786), Expect = 2.749e-98
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSY+LSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFF+ALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE
Sbjct:  385 MLGSYKLSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFNALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|515661656|ref|WP_017094256.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1067468651|gb|OEF38319.1| ABC transporter [Vibrio splendidus 1S-124])

HSP 1 Score: 306.99 bits (785), Expect = 3.802e-98
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSY+LSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSI+KNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE
Sbjct:  385 MLGSYKLSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIIKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1243943354|ref|WP_096036746.1| (ABC transporter ATP-binding protein [Vibrio anguillarum] >gi|1243401294|gb|ATC58823.1| ABC transporter [Vibrio anguillarum])

HSP 1 Score: 303.908 bits (777), Expect = 5.140e-97
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQ+IGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIM+NLTEFAQKENKTI+MVTHDAELAQRADFILTL KNAQLQDEE
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQEIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMQNLTEFAQKENKTIVMVTHDAELAQRADFILTLPKNAQLQDEE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1061905465|ref|WP_069212128.1| (ABC transporter ATP-binding protein [Vibrio anguillarum] >gi|1142950282|gb|AQM15018.1| ABC transporter [Vibrio anguillarum] >gi|1143000300|gb|AQM04554.1| ABC transporter [Vibrio anguillarum])

HSP 1 Score: 303.908 bits (777), Expect = 5.425e-97
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQ+IGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIM+NLTEFAQKENKTI+MVTHDAELAQRADFILTL KNAQLQDEE
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQEIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMQNLTEFAQKENKTIVMVTHDAELAQRADFILTLPKNAQLQDEE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1330404130|ref|WP_102459936.1| (ABC transporter ATP-binding protein [Vibrio lentus] >gi|1326665911|gb|PMI52791.1| ABC transporter [Vibrio lentus])

HSP 1 Score: 302.368 bits (773), Expect = 2.071e-96
Identity = 145/151 (96.03%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQ+IGVLKTTVRQNLQLTAPNACDSEFF+ALALAE+DINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIM+NLTEFAQKENKTI+MVTHDAELAQRADFILTLQKNAQLQD+E
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQEIGVLKTTVRQNLQLTAPNACDSEFFNALALAEIDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMQNLTEFAQKENKTIVMVTHDAELAQRADFILTLQKNAQLQDKE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1330170648|ref|WP_102349193.1| (ABC transporter ATP-binding protein [Vibrio lentus] >gi|1326602851|gb|PMH93559.1| ABC transporter [Vibrio lentus] >gi|1326724400|gb|PMJ05150.1| ABC transporter [Vibrio lentus])

HSP 1 Score: 302.368 bits (773), Expect = 2.071e-96
Identity = 145/151 (96.03%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQ+IGVLKTTVRQNLQLTAPNACDSEFF+ALALAE+DINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIM+NLTEFAQKENKTI+MVTHDAELAQRADFILTLQKNAQLQD+E
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQEIGVLKTTVRQNLQLTAPNACDSEFFNALALAEIDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMQNLTEFAQKENKTIVMVTHDAELAQRADFILTLQKNAQLQDKE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|1330710670|ref|WP_102575684.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1326865988|gb|PMK41132.1| ABC transporter [Vibrio splendidus])

HSP 1 Score: 302.368 bits (773), Expect = 2.307e-96
Identity = 145/151 (96.03%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQ+IGVLKTTVRQNLQLTAPNACDSEFF+ALALAE+DINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIM+NLTEFAQKENKTI+MVTHDAELAQRADFILTLQKNAQLQD+E
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQEIGVLKTTVRQNLQLTAPNACDSEFFNALALAEIDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMQNLTEFAQKENKTIVMVTHDAELAQRADFILTLQKNAQLQDKE 535

[Close]

BLAST of abc transporter vs. nr
Match: gi|515623193|ref|WP_017055793.1| (ABC transporter ATP-binding protein [Vibrio kanaloae] >gi|848617336|gb|AKN35710.1| Transport ATP-binding protein CydC [Vibrio kanaloae] >gi|848618115|gb|AKN36290.1| Transport ATP-binding protein CydC [Vibrio kanaloae] >gi|848619397|gb|AKN37371.1| Transport ATP-binding protein CydC [Vibrio kanaloae] >gi|848620488|gb|AKN38309.1| Transport ATP-binding protein CydC [Vibrio sp. 1S_269] >gi|848621197|gb|AKN38865.1| Transport ATP-binding protein CydC [Vibrio kanaloae] >gi|848622508|gb|AKN39966.1| Transport ATP-binding protein CydC [Vibrio kanaloae] >gi|848622671|gb|AKN40107.1| Transport ATP-binding protein CydC [Vibrio kanaloae] >gi|1067445818|gb|OEF16215.1| ABC transporter [Vibrio kanaloae 5S-149])

HSP 1 Score: 285.419 bits (729), Expect = 1.008e-89
Identity = 137/151 (90.73%), Postives = 145/151 (96.03%), Query Frame = 0

Query:    1 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEE 151
            MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVR+NLQL APNACD+EFF+AL LAE+DI+LDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIM+NLTEFAQK+NKTI+MVTHDAELA   DFILTL KNAQLQDEE
Sbjct:  385 MLGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRENLQLAAPNACDNEFFEALTLAELDISLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMRNLTEFAQKKNKTIVMVTHDAELAHLTDFILTLPKNAQLQDEE 535

The following BLAST results are available for this feature:

BLAST of abc transporter vs. L. salmonis genes
BLAST of abc transporter vs. SwissProt
BLAST of abc transporter vs. nr

BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 15


Match Name	E-value	Identity	Description
EMLSAG00000007660	1.367e-23	46.60	supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 g...	[more]
EMLSAG00000003104	5.827e-21	41.53	supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-...	[more]
EMLSAG00000010048	2.817e-16	42.16	supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1...	[more]
EMLSAG00000003611	5.670e-15	37.04	supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 ...	[more]
EMLSAG00000008248	3.012e-13	37.29	supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1...	[more]
EMLSAG00000002221	7.405e-13	35.00	supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ...	[more]
EMLSAG00000001342	1.705e-12	33.78	supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 ...	[more]
EMLSAG00000011700	3.151e-12	34.26	supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ...	[more]
EMLSAG00000004490	3.157e-12	40.43	supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1...	[more]
EMLSAG00000001655	1.254e-11	33.02	supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487...	[more]

Pages

BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|123292983\|sp\|Q2J0F4.1\|NDVA_RHOP2	6.932e-27	52.88	RecName: Full=Beta-(1-->2)glucan export ATP-bindin...	[more]
gi\|46396522\|sp\|Q9JXR3.1\|MSBA_NEIMB	4.104e-26	52.89	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|123749266\|sp\|Q13BH6.1\|NDVA_RHOPS	7.716e-26	48.67	RecName: Full=Beta-(1-->2)glucan export ATP-bindin...	[more]
gi\|81311132\|sp\|Q5F4X8.1\|MSBA_NEIG1	2.002e-25	50.00	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|46396521\|sp\|Q9JW59.1\|MSBA_NEIMA	2.330e-25	50.00	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|81841936\|sp\|Q89UT8.1\|NDVA_BRADU	5.804e-25	49.56	RecName: Full=Beta-(1-->2)glucan export ATP-bindin...	[more]
gi\|148839579\|sp\|Q3SP57.2\|NDVA_NITWN	1.564e-24	50.00	RecName: Full=Beta-(1-->2)glucan export ATP-bindin...	[more]
gi\|74996978\|sp\|Q54RU1.1\|ABCB6_DICDI	3.906e-24	51.96	RecName: Full=ABC transporter B family member 6; A...	[more]
gi\|82230024\|sp\|Q56A55.1\|ABCB8_DANRE	8.174e-24	50.00	RecName: Full=ATP-binding cassette sub-family B me...	[more]
gi\|81859401\|sp\|Q9ZCM8.1\|Y696_RICPR	9.749e-24	37.58	RecName: Full=Putative export ATP-binding/permease...	[more]

Pages

BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|499468006\|ref\|WP_011154646.1\|	1.391e-99	100.00	ABC transporter ATP-binding protein [Vibrio anguil...	[more]
gi\|1046611803\|ref\|WP_065681036.1\|	1.727e-99	100.00	ABC transporter ATP-binding protein [Vibrio splend...	[more]
gi\|1330292086\|ref\|WP_102442272.1\|	2.749e-98	98.68	ABC transporter ATP-binding protein [Vibrio splend...	[more]
gi\|515661656\|ref\|WP_017094256.1\|	3.802e-98	98.68	ABC transporter ATP-binding protein [Vibrio splend...	[more]
gi\|1243943354\|ref\|WP_096036746.1\|	5.140e-97	97.35	ABC transporter ATP-binding protein [Vibrio anguil...	[more]
gi\|1061905465\|ref\|WP_069212128.1\|	5.425e-97	97.35	ABC transporter ATP-binding protein [Vibrio anguil...	[more]
gi\|1330404130\|ref\|WP_102459936.1\|	2.071e-96	96.03	ABC transporter ATP-binding protein [Vibrio lentus...	[more]
gi\|1330170648\|ref\|WP_102349193.1\|	2.071e-96	96.03	ABC transporter ATP-binding protein [Vibrio lentus...	[more]
gi\|1330710670\|ref\|WP_102575684.1\|	2.307e-96	96.03	ABC transporter ATP-binding protein [Vibrio splend...	[more]
gi\|515623193\|ref\|WP_017055793.1\|	1.008e-89	90.73	ABC transporter ATP-binding protein [Vibrio kanalo...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1183_size56743	supercontig	scaffold1183_size56743:31356..33363 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:transmembrane transport

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1183_size56743-snap-gene-0.1-mRNA-1	maker-scaffold1183_size56743-snap-gene-0.1-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1183_size56743:31356..33363-

gene from alignment at scaffold1183_size56743:31356..33363-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1183_size56743-snap-gene-0.1 ID=maker-scaffold1183_size56743-snap-gene-0.1|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=2008bp|location=Sequence derived from alignment at scaffold1183_size56743:31356..33363- (Tigriopus kingsejongensis)
CCGGTCAAGAAGTACCTTATTCAGGAACCACCATGCTTGGCAGTTATGAA
CTGTCCACACTTACCGAAATGTCACGTCACATGGCGATACGTTATGTTCC
TCAAGATATAGGGGTACTTAAAACGACAGTTAGACAGAACTTACAACTAA
CGGCACCAAATGCCTGCGATAGCGAATTCTTTGACGCCTTAGCTCTAGCC
GAAGTAGATATTAACCTCGATTATGATGCCAGCCTTCTTTCTGGTGGCCA
GCAGCAACGCGTCGCTCTAGCTAGTATATTTCTCAATCAAGCCAGCATTT
TCTTGTTAGATGAACCAACGAGTGCACTTGATAAAAAAACAGCCTTATCC
ATCATGAAAAACCTAACTGAATTCGCGCAAAAAGAAAATAAAACCATAAT
CATGGTAACCCATGATGCAGAGCTAGCCCAACGAGCCGACTTTATATTGA
CACTACAAAAAAATGCTCAACTACAGGATGAAGAAGTATGACTTATCAAA
ATACCCCATCTTCCAAATCAAACATTCCCGCGAGCGCAAAATATCGTTTA
TACAGGGTGGGAGCTGGATGGGCGTTGGTTGCGGCACTCGAAGCCTTAAC
CTACACAGTTCTTGCACTATCATTGGTAAAACAAGCCCCGCCACTAGGTG
TCATATCAGCAGCAATTGTCGCTATTTTGGTGACGGTTCTAGTAACACGA
GCGGGGTTTATATCTGGTGCGCAATTAGCCGGAGATTTGTACTCGGCAAT
CGGTCAATCTCTTAGTAAAGCAAAACTTTCTTGGTTTAACGATCAGCATC
GAACGCAACTAACTCAACTTGCCGAACGAGGCATTCCTGGCTTTATGTCA
ATCCCAGCTCACCAATTACAAACATTTTTGCACACGCCATTAGTACCCTT
ATTCTTGATCGCTGGCATCGGAATCGTTGGGGGGGCAGATGTTGCACTAA
TCAGTGCAGTCTCATTGATAGGCGCATTGCTGCTGCAATACAAAGCACAG
AATCACCTCAGTAACTCTGACAGCGAAAGACACAACGCTGATGTTCAAGC
CACAAAATCAACGCTCGAGCTCATAGATCACCTTGATTTGCTTCGCTCAA
CGGCAGGACCTGAACGAGCGATAGAAAGGATTGACCAAAGTTGGTGTACA
CAAGAAAAAGTACATTCGAGAATCAACCTAACTGCATCCATGGCCACTTT
AACCTCTGCACTTGCAACGGTCTTGCCTTTGGCCTGCGTCACTATCTACC
TAGTTGTAGAAGGGGTTACCCAACCACTATTGATTTTGGGGCTGCTGATA
TTAATTACCAGAGCGGCTGCACCACTAGGAGAATTAGCCTTAGCTGGTTT
CGCCATCAACGACGTAAAGTCCTCAATAAGAGATTACAACCAGCTAACCA
ATGTACCAACTCTACCTGAACCCAAACCGGAAAATGCTATTAGTCCTAAT
AACTACAATTTCGAACTAAATCATGTTGGCTATTTGGATCTTTTCAAGGA
CGCCAATGTAGAAATAGTACAAGGTGAAAAAGTTGTAATCAATGGCGTAA
GTGGTAGCGGAAAGAGCACGTTATTAGGATTATTCTTAAGGTTTGATGAC
CCTAACCAAGGTCATATTTCGCTTGGTGGCATAAACCTCCAGAATATTCC
ATACGACATATTAATCCAGCACATCGCCTATGTCGCTCAGGATCCAATAA
TATTTACTGGAACATTGGCCGAAAATATTCGTTTAGGTAACCCAGAGGCA
AGTAATGCTGAAGTAGAACTCTTTGCTAGGCAAGCGCAACTGAGTGAACT
TATTGACTTATCAGGCGATGGAATAAACCAAAGTGTAGGCCAGAAAGGAT
CAAGGCTTTCTGGAGGGGAAAGACAAAGAGTCGCAATTGCTCGAGCTCTA
ATAAAAAAAGCACCTATCCTAATTTTAGATGAAGCCACCTCTGCACTTGA
TGAAGTAACCGAACAGAAAATAGCACAACAAACTCAAGCATTAGGTTCAA
CTGTTATT

Synonyms

The feature 'abc transporter' has the following synonyms


Synonym
Tk01125

Add to Basket

Pages

Pages

Pages

Search form