gamma-aminobutyric-acid receptor alpha-2 subunit, maker-scaffold1207_size55689-snap-gene-0.12 (gene) Tigriopus kingsejongensis

Overview
Namegamma-aminobutyric-acid receptor alpha-2 subunit
Unique Namemaker-scaffold1207_size55689-snap-gene-0.12
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11")

HSP 1 Score: 450.669 bits (1158), Expect = 3.332e-149
Identity = 245/496 (49.40%), Postives = 324/496 (65.32%), Query Frame = 0
Query:   50 YKTGKELAREMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYN-NSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPI---SLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSK-EFGEI-----ERKLLEEYRKSRAKRRSYCPICDGPFGRPPLADSENGQEDQDEAACEDNHVGEPDEQTPQVIPHRDTTPASLRQRGKEKQPPAWLRRIRNRFKMPRIVKKLEHVILFGLSRVVSFLTIKPIHQMMIYHSTDEALEMIDAMSRKYFPTVFM 535
            Y TGKE+  ++  TL  LL   Y++R+RP FG  P  V++N+ I SMGPVDE +QS+ +D YFRQAW D RL++N  S + EL L+W+ILN IWKPDT+F+NGK+SKMHKITVPN+F RISPDG VS+SQRLTIHA+C M LKKFPFDSQ CPL+IGSYGY ++EV Y WK   +   +L +  M QF+L+ W S   T+ TNRKI  GFR DSIA + FSF+RQ G+F+LQIY P+ ++V CSWVAFWI+KTD PSR  LGV + LSVTKIGF  KGKP V Y TALD+F+I+CF++VF SL+E+A+IN+I++FI RYK     A+E KE  ++ +FG++     +R LL++  K   K  S   I + P      +D EN          +    G   + TP    H     AS  +  K  Q  + L           I K  E +  F L+  ++F++ KP+ QM IY  T+EALE ID+++RK FP  F+
Sbjct:  474 YSTGKEVRDQIQVTLTKLL-TSYNRRIRPNFGGPPCKVIMNLLINSMGPVDEKSQSYLVDAYFRQAWVDQRLSFNATSSVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEISTLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIASINFSFKRQYGFFLLQIYTPMFIIVMCSWVAFWIVKTDAPSRVSLGVASSLSVTKIGFAGKGKPNVEYPTALDIFIIICFMTVFLSLVEYALINYISVFISRYK-----AREKKELLARTKFGKLLSKRQKRHLLKQ--KDMMKTISQLTIENNP------SDDEN---------VKTKSAGTMTDNTPLKGVH---FKASTLEVSKIAQRASDL-----------IFKFCETIERF-LTLAITFISPKPVSQMYIYTHTEEALEKIDSLARKLFPLTFI 931          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34")

HSP 1 Score: 376.326 bits (965), Expect = 1.691e-125
Identity = 189/356 (53.09%), Postives = 250/356 (70.22%), Query Frame = 0
Query:   28 IEHDAKADLGFPQRVKRQTFEPYKTGKELAREMSGTLDTLL-GPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKT-QPISLEEVRMAQFSLVSWDSGVSTNQTNRKIETG-FRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKT----DVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKE 376
            +E + + D     R KR  F  YKTG+E  +++S TLD LL    YDKR+RP  G  P+ VV+N+SI SMGPVDE   +FS+DCYFRQ+W D+RL YN SG+  L+L+W  L  IW PDTF +NGK+S +HKITVPN+F R+SP G VSYSQRLTI A C M LKKFPFD+Q+CPL +GS+G+ ++++ Y WK  + +S  ++ +AQF L+++ S      + R  E G +R DS + + F FERQSGYF+LQIY PL L+VFCSWVAFW++KT    + P+R  LG  +VLS+  IGF  K +P+V YATALDVF+ILCF +VFA+L+EFA INFI  FI   K   ++ +E KE
Sbjct:   37 MEEEKERDDRLVSRYKR-AFTAYKTGQEQTQKVSETLDHLLVYSFYDKRIRPKLGGPPVKVVINLSILSMGPVDEARNAFSMDCYFRQSWVDERLKYNTSGVEVLALNWAFLAKIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQICPLKLGSFGHSNKDLIYQWKKPKAVSFNKLGLAQFHLINYSSYNIIEPSLRLTEKGNYRNDSSSVMEFVFERQSGYFLLQIYTPLTLIVFCSWVAFWLVKTEKGGEXPARTXLGANSVLSIVNIGFTGKDRPKVGYATALDVFIILCFFTVFAALVEFACINFIDTFI---KWKRIKIEEQKE 388          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1")

HSP 1 Score: 370.163 bits (949), Expect = 4.351e-123
Identity = 180/364 (49.45%), Postives = 250/364 (68.68%), Query Frame = 0
Query:   19 QQVLQPVSDIEHDAKADLGFPQRVKRQTFEPYKTGKELAREMSGTLDTLLGP-RYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLE-EVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKT----DVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKE 376
            + V Q  +   HD +   G   + KR +   Y+   EL+  +S TLD LL   RYD+++RP  G  P+ V +N +IRSMGPVDE  Q F +DCYFRQ W D RL YN+S + EL ++W+ L  IW+PDTF +NGK S +HK+TVPN+F RISPDG +SYSQRLT+ ARC M L+KFP DSQ CPL IGS+G+  +E+ Y+W + P+S++ ++ +AQ+ L+SW++   T  +  +   G +  S+  L F+F+R++GY++LQIY PL L+V CSWV FW+IKT    ++P+R  LG T  L++  IGFG K KP V YATALDVF++LCF++VFA+LIEFA INFI   +RR K+ +    EL+E
Sbjct:   35 EHVQQHHAQPPHDHRHHHGNRNKTKRSSRIFYRRQDELSSRVSRTLDALLSENRYDRQIRPQIGDSPIKVSVNFAIRSMGPVDEQKQLFLMDCYFRQYWTDPRLVYNSSKLNELPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNWTSMPLSMDKKLGLAQYHLISWNNSAFTRYS--RNAGGDQNVSVIALHFTFQRRTGYYLLQIYIPLTLIVCCSWVTFWLIKTEKGGEIPARTSLGGTXXLAIVTIGFGGKSKPRVGYATALDVFIVLCFMTVFAALIEFAFINFIDTLVRRLKKND----ELEE 392          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58")

HSP 1 Score: 221.09 bits (562), Expect = 4.978e-66
Identity = 109/283 (38.52%), Postives = 165/283 (58.30%), Query Frame = 0
Query:   72 YDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQP-ISLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFA 352
            YD R+RP FG  PL V  +++I S   + E +  +++  Y  Q WKD+RL+++    + L+L       IW PDTFF N K S +H +T  NK  R+  DG+++Y  R T    C M L  +P DSQ C + I SYGY   +V   W+ +P + +E+ ++ QF++V W+    TN+   K+ TG  T     L F  +R  GYF+ Q Y P +L+V  SWV+FWI      +R  LG+TTVL++T I  G +   P + Y  A+D+++++CFV VFA+L+E+A
Sbjct:   91 YDIRLRPNFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLSFSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQKPVVGVEDAQLPQFTIVGWE----TNERKIKLATG--TYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 367          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000006968 (supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1 gene:EMLSAG00000006968 transcript:EMLSAT00000006968 description:"maker-LSalAtl2s396-augustus-gene-1.5")

HSP 1 Score: 180.259 bits (456), Expect = 2.243e-51
Identity = 103/274 (37.59%), Postives = 157/274 (57.30%), Query Frame = 0
Query:  108 LDCYFRQAWKDDRLAY----NNSG---IRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWK--TQPISLE-EVRMAQFSLVSW---DSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAE 368
            +DCYFRQ W+ +RL++    NN+    I +LSL+ K+L  IWKPDT+F NG  S +H IT PNK  RIS  G ++YS RLTI A+C M LK FP D Q CPL +GSY Y  ++V Y W+  +  ++ E +++++QF +++        S N  +R         S+  ++ + +R +GYF++QIY P  L+V  SWV FW+ +     R GLG+TTVL+++ I      + ++P   + +V+          SL+EF  +  + I     KE E
Sbjct:    1 MDCYFRQYWRXERLSFTGLKNNTHHLKIDQLSLNVKMLEKIWKPDTYFHNGLSSYIHTITRPNKLLRISEHGDITYSMRLTIKAKCPMMLKSFPMDWQSCPLVLGSYAYTIDQVYYRWQHSSNAVAYEGKLKLSQFDIITTAYRSLNFSRNTDDRYTLPLVGGFSVLQVVIALQRHTGYFLIQIYLPCTLIVVLSWVGFWLNREATSDRVGLGITTVLTLSTIAL--DSRTDLPKMGSGEVY----------SLVEFPHLADLQIIDEEEKELE 262          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5")

HSP 1 Score: 174.096 bits (440), Expect = 4.136e-49
Identity = 95/281 (33.81%), Postives = 158/281 (56.23%), Query Frame = 0
Query:   64 LDTLLGPRYDKRVRPGFGKK----PLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELS-LDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQ-PIS-LEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVF 336
            LD++LG  YDKR+RP  GK     P  + +N+ +R++  +D+    +S+   FR+ W D+RL Y +     L  L       +W PDTFF N K ++ H+I VPN + RI P+G + YS R+++   C M L+ +P D Q+C L I SYG+  +++ Y WK + P+  +  + + +F+L  + S      TN    +  + + I      F+R+  Y+++ IY P  ++V  SWV+FW+ +  +P+R  LGVTT+L+++    G   + P V Y  A+DV+
Sbjct:   16 LDSILGTGYDKRIRPS-GKNDTDGPATINVNIYLRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELI------FKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVW 289          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11")

HSP 1 Score: 174.481 bits (441), Expect = 2.189e-48
Identity = 97/294 (32.99%), Postives = 165/294 (56.12%), Query Frame = 0
Query:   72 YDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNN---SGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSW-KTQPISLEE-VRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFL--LFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSV-TKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFI 357
            YDK   P +     +V+ ++++ S+  +DE++ +++ D +F Q+WKD+RL   +   S  R L ++W  L  IW+PD+FF N K      +T+PN +  +  D ++ Y  +LT+   C M  K +P D+Q C L I S  + ++++ ++W K  P+ +++ + + Q  L+S  S   T        T + T     L  +F F+R+ GY++   Y P  L+V  SW++FWI    VP+R  LGVT++L++ T+     K  P V Y  A+DVF+  C V VF SL+E+A++N +
Sbjct:    8 YDKMRPPKYKGNATEVLFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEW--LEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDKEMPLDVDKGIELPQLELISTKSDDCT--------TVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 291          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20")

HSP 1 Score: 167.933 bits (424), Expect = 3.581e-46
Identity = 112/371 (30.19%), Postives = 178/371 (47.98%), Query Frame = 0
Query:   53 GKELA--REMSGTLDTLLGPR-YDKRVRPGFGKKPLD----VVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRE----LSLDWKIL--------------------------NMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWK-TQPISLEEVRMAQFSLVSW--DSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEF 382
            GKE+   +E    LD++LGP  YDKR+RP  G    D    V +N+ +RS   +D+    +S     RQ W D RL + +  +      +  D+ I+                          + +W  DTFF N K  + H I   N + R+ P+G V YS R+++   C M L  FP D Q C L + SYG+   ++ Y WK T P+ +    +A  SL       G + +  + K  TG  + S   +  +F RQ  +++L IY P  ++V  SW++FWI    VP+R  LG+T +L+++          P V Y  A+DV+  +C   VF++L+E+A++N+ +      +    RA + KE K +E 
Sbjct:   36 GKEVNYRQEEKKILDSVLGPDVYDKRIRPS-GLNSTDSASLVTVNIFVRSFSNIDDVKMEYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDSSKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKETNPVQM----VANLSLPGGFKLDGFTNHNCDVKXATG--SYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNYAS------RSDAQRAAKQKEAKEREL 393          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3")

HSP 1 Score: 152.525 bits (384), Expect = 8.611e-42
Identity = 87/256 (33.98%), Postives = 142/256 (55.47%), Query Frame = 0
Query:  109 DCYFRQAWKDDRLAYNNSGIRELSLDWKILNM---IWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWK-TQPISL---EEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFI 357
            D Y RQ W D RL++ +    +  LD    N+   IWKP+ FF N K +    +TVPN   RI P+G + Y  RL +   C M L ++P D+Q+C + I S+   ++E+   W  T  +S+   +++RM QF +    + ++TN+ +     G  +  +A   F   R  G+ ++Q Y P +L+V  SWV+FW+    VP+R  LGV T+L+V+    G    P+  Y  A+DV++ +C   VFA+L+EF ++N++
Sbjct:    6 DTYLRQKWSDSRLSHPDI---KSPLDLAXPNLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEWDPTHELSVTVAKDLRMPQFEM----TKITTNRCHETNHMGNYSCLVA--EFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVSG-TSVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYL 251          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6")

HSP 1 Score: 136.346 bits (342), Expect = 5.439e-35
Identity = 104/322 (32.30%), Postives = 164/322 (50.93%), Query Frame = 0
Query:   64 LDTLLGPRYDKRVRP-GFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRE-LSL-DWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGS----------------------YGYPSEEVTYSWK-TQPISL-EEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFI 357
            LD+LL   YD+R  P     K  +V + + +RS+G ++ +T    +D Y RQ W D RL  N+ G+ E + L D  ++  +WKP+ +F N K ++   +TVPN   RI P G++ Y  RL +   C M L KFP D Q C + I S                          ++E+   WK T+PI + +EV+M QF +    S V  +        G  +  +A L    +R  G+ ++Q Y P +L+V  SWV+FW+    V  R  LGVTT+L+V+      + + P V Y  A+D+++  C   +FA+L+EF  +N++
Sbjct:   12 LDSLL-QNYDRRATPTNHIGKATEVAIKLYVRSLGSINPDT--MVIDLYLRQHWFDSRL--NHPGLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQFEI----STVIPSICQETFHIGNYSCLLAQL--HLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYM 322          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|232127|sp|P30191.1|GBRA6_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor)

HSP 1 Score: 245.743 bits (626), Expect = 2.377e-74
Identity = 138/355 (38.87%), Postives = 201/355 (56.62%), Query Frame = 0
Query:   53 GKELAREMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD-SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKE--AEVRAK-ELKEKKSKEFGEIERKLLEEYRKSRAKRRS 402
            G   +  +S  LD LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D+RL +       LSL+  +++ IW PDTFF NGK+S  H +T PNK  R+  +G++ Y+ RLTI+A C M L  FP D   CPL  GSY YP  E+ Y+WK  P+   EV     SL+ +D  G + +    K  TG     I  + F  +R+ GYF++QIY P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T    +  E  A+  AK  + + K+ E  E E  +  + +    KR S
Sbjct:   25 GNFYSENVSRILDNLL-EGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYV--IMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAAKPPVAKSKTTESLEAEIVVHSDSKYHLKKRIS 375          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|341941084|sp|P16305.3|GBRA6_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor)

HSP 1 Score: 244.588 bits (623), Expect = 6.642e-74
Identity = 127/308 (41.23%), Postives = 182/308 (59.09%), Query Frame = 0
Query:   53 GKELAREMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD-SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFIT 358
            G   +  +S  LD LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D+RL +       LSL+  +++ IW PDTFF NGK+S  H +T PNK  R+  +G++ Y+ RLTI+A C M L  FP D   CPL  GSY YP  E+ Y+WK  P+   EV     SL+ +D  G + +    K  TG     I  + F  +R+ GYF++QIY P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T
Sbjct:   25 GNFYSENVSRILDNLL-EGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYV--IMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|126302548|sp|Q16445.2|GBRA6_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor)

HSP 1 Score: 244.588 bits (623), Expect = 7.003e-74
Identity = 127/308 (41.23%), Postives = 184/308 (59.74%), Query Frame = 0
Query:   53 GKELAREMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRE-LSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFIT 358
            G   +  +S  LD LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D+RL +   G  E LSL+  +++ IW PDTFF NGK+S  H +T PNK  RI  +G++ Y+ RLTI+A C M L  FP D   CPL  GSY YP  E+ Y+WK  P+   EV     SL+ +D  +    ++  I++      I  + F  +R+ GYF++QIY P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T
Sbjct:   25 GNFYSENVSRILDNLL-EGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFG--GPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL-IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|3023835|sp|Q90845.1|GBRA6_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor)

HSP 1 Score: 241.891 bits (616), Expect = 1.217e-72
Identity = 127/305 (41.64%), Postives = 182/305 (59.67%), Query Frame = 0
Query:   57 AREMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRE-LSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD-SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFIT 358
            +  ++  LD LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D+RL +   G  E L L+  +++ IW PDTFF NGK+S  H +T PNK  RI  +G++ Y+ RLTI+A C M L  FP D   CPL  GSY YP  E+ Y+WK  P+   EV     SL+ +D  G + +    K  TG     I  + F  +R+ GYF++QIY P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T
Sbjct:   29 SENITRILDKLLD-GYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKF--GGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYV--IMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|143811394|sp|P20237.2|GBRA4_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor)

HSP 1 Score: 236.884 bits (603), Expect = 6.655e-70
Identity = 131/325 (40.31%), Postives = 183/325 (56.31%), Query Frame = 0
Query:   64 LDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD-SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEFGEIE 386
            LD+LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D RL Y+   I  L L+  ++  +W PDTFF NGK+S  H +T PNK  RI  +G++ Y+ RLTI A C M L  FP D   CPL  GSY YP  E+ Y+W   P    EV     SLV +D  G + +    K  TG     +  + F   R+ GYF++Q Y P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T          V+ ++ K K SK   EI 
Sbjct:   52 LDSLLD-GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYI--VMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT---------NVQMEKAKRKTSKAPQEIS 363          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|206729865|sp|P48169.2|GBRA4_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor)

HSP 1 Score: 235.728 bits (600), Expect = 1.912e-69
Identity = 128/325 (39.38%), Postives = 185/325 (56.92%), Query Frame = 0
Query:   64 LDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD--SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEFGEI 385
            LD+LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D RL Y+   I  L L+  ++  +W PDTFF NGK+S  H +T PNK  RI  +G++ Y+ RLTI A C M L  FP D   CPL  GSY YP  E+ Y+W   P    EV     SLV +D      +++T + I   +   ++ F L    R+ GYF++Q Y P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T          ++ ++ K K SK   E+
Sbjct:   52 LDSLLD-GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHL---RRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT---------NIQMEKAKRKTSKPPQEV 362          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|13959377|sp|Q9D6F4.1|GBRA4_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor)

HSP 1 Score: 235.728 bits (600), Expect = 2.008e-69
Identity = 124/297 (41.75%), Postives = 173/297 (58.25%), Query Frame = 0
Query:   64 LDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD-SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFIT 358
            LD+LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D RL Y+   I  L L+  ++  +W PDTFF NGK+S  H +T PNK  RI  +G++ Y+ RLTI A C M L  FP D   CPL  GSY YP  E+ Y+W   P    EV     SLV +D  G + +    K  TG     +  + F   R+ GYF++Q Y P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T
Sbjct:   52 LDSLLD-GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYI--VMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 344          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|120763|sp|P28471.1|GBRA4_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor)

HSP 1 Score: 235.728 bits (600), Expect = 2.230e-69
Identity = 124/297 (41.75%), Postives = 173/297 (58.25%), Query Frame = 0
Query:   64 LDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWD-SGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFIT 358
            LD+LL   YD R+RPGFG    +V  ++ + S GPV +    +++D +FRQ W D RL Y+   I  L L+  ++  +W PDTFF NGK+S  H +T PNK  RI  +G++ Y+ RLTI A C M L  FP D   CPL  GSY YP  E+ Y+W   P    EV     SLV +D  G + +    K  TG     +  + F   R+ GYF++Q Y P ++ V  S V+FWI K  VP+R   G+TTVL++T +    +   P+V YATA+D F+ +CF  VF++LIEFA +N+ T
Sbjct:   52 LDSLLD-GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYI--VMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 344          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|75061993|sp|Q5REA1.1|GBRG2_PONAB (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor >gi|116242488|sp|P18507.2|GBRG2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor)

HSP 1 Score: 231.491 bits (589), Expect = 8.955e-69
Identity = 124/331 (37.46%), Postives = 183/331 (55.29%), Query Frame = 0
Query:   37 GFPQRVKRQTFEPYKTGKELAR-------EMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEV---RMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIG-FGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINF 356
            GF  +     +E Y + K           +++  L+ LL   YD ++RP  G KP  +  +M + S+GPV+     +++D +F Q W D RL +N S I+ L L+  ++  IW PDTFF N K++  H IT PN+  RI  DG V Y+ RLTI A C++ L  FP D   CPL   SYGYP EE+ Y WK   + + +    R+ QFS       V    T   ++T      +  + F   R+ GYF +Q Y P  L+V  SWV+FWI K  VP+R  LG+TTVL++T +     K  P+V Y TA+D+FV +CF+ VF++L+E+  +++
Sbjct:   36 GFTSQKSDDDYEDYASNKTWVLTPKVPEGDVTVILNNLL-EGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFN-STIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF------VGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Match: gi|120788|sp|P18508.1|GBRG2_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor)

HSP 1 Score: 231.491 bits (589), Expect = 9.203e-69
Identity = 124/331 (37.46%), Postives = 183/331 (55.29%), Query Frame = 0
Query:   37 GFPQRVKRQTFEPYKTGKELAR-------EMSGTLDTLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEV---RMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIG-FGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINF 356
            GF  +     +E Y + K           +++  L+ LL   YD ++RP  G KP  +  +M + S+GPV+     +++D +F Q W D RL +N S I+ L L+  ++  IW PDTFF N K++  H IT PN+  RI  DG V Y+ RLTI A C++ L  FP D   CPL   SYGYP EE+ Y WK   + + +    R+ QFS       V    T   ++T      +  + F   R+ GYF +Q Y P  L+V  SWV+FWI K  VP+R  LG+TTVL++T +     K  P+V Y TA+D+FV +CF+ VF++L+E+  +++
Sbjct:   35 GFTSQKSDDDYEDYASNKTWVLTPKVPEGDVTVILNNLL-EGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFN-STIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF------VGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1325256144|ref|XP_023321290.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X4 [Eurytemora affinis])

HSP 1 Score: 413.305 bits (1061), Expect = 1.077e-134
Identity = 201/369 (54.47%), Postives = 265/369 (71.82%), Query Frame = 0
Query:   18 SQQVLQPVSDIEHDAKADLGFPQRVKRQTFEPYKTGKELAREMSGTLDTLLGP-RYDKRVRP---GFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEF 382
            S ++LQ   + E+    +     RVKR  F  Y+ GKE+A ++S TLD LL   RY++++RP        P+ V +NM+IRSMGPVDE  + FSLDCYFRQ+W D RL +N +GI EL LDW+ L  IWKPDT FLNG++  +HKITVPN+F RISP G VSYSQRLT+ ++C M L KFPFDSQ C L IGSYGY S+++TY W  +P+S++++ +AQ+ +   + GV T+ T RKI +GFRTDS+AFL F F+RQSG+F+L IY PL L+V CSWV+FWI+KTDVPSR  LGVT++LSVTK+GFG K KP++ YATALDV+ I+CF   FA+L+EFA+INFI  + +R K+ E    E   K+   F
Sbjct:   28 SCRILQSQENHENQEYQEQEREARVKRMAF--YRNGKEVAGQVSDTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWALKPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTDVPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRF 394          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1325256137|ref|XP_023321274.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 413.305 bits (1061), Expect = 1.180e-134
Identity = 201/369 (54.47%), Postives = 265/369 (71.82%), Query Frame = 0
Query:   18 SQQVLQPVSDIEHDAKADLGFPQRVKRQTFEPYKTGKELAREMSGTLDTLLGP-RYDKRVRP---GFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEF 382
            S ++LQ   + E+    +     RVKR  F  Y+ GKE+A ++S TLD LL   RY++++RP        P+ V +NM+IRSMGPVDE  + FSLDCYFRQ+W D RL +N +GI EL LDW+ L  IWKPDT FLNG++  +HKITVPN+F RISP G VSYSQRLT+ ++C M L KFPFDSQ C L IGSYGY S+++TY W  +P+S++++ +AQ+ +   + GV T+ T RKI +GFRTDS+AFL F F+RQSG+F+L IY PL L+V CSWV+FWI+KTDVPSR  LGVT++LSVTK+GFG K KP++ YATALDV+ I+CF   FA+L+EFA+INFI  + +R K+ E    E   K+   F
Sbjct:   31 SCRILQSQENHENQEYQEQEREARVKRMAF--YRNGKEVAGQVSDTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWALKPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTDVPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRF 397          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1325256141|ref|XP_023321281.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 412.92 bits (1060), Expect = 1.499e-134
Identity = 201/369 (54.47%), Postives = 265/369 (71.82%), Query Frame = 0
Query:   18 SQQVLQPVSDIEHDAKADLGFPQRVKRQTFEPYKTGKELAREMSGTLDTLLGP-RYDKRVRP---GFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEF 382
            S ++LQ   + E+    +     RVKR  F  Y+ GKE+A ++S TLD LL   RY++++RP        P+ V +NM+IRSMGPVDE  + FSLDCYFRQ+W D RL +N +GI EL LDW+ L  IWKPDT FLNG++  +HKITVPN+F RISP G VSYSQRLT+ ++C M L KFPFDSQ C L IGSYGY S+++TY W  +P+S++++ +AQ+ +   + GV T+ T RKI +GFRTDS+AFL F F+RQSG+F+L IY PL L+V CSWV+FWI+KTDVPSR  LGVT++LSVTK+GFG K KP++ YATALDV+ I+CF   FA+L+EFA+INFI  + +R K+ E    E   K+   F
Sbjct:   30 SCRILQSQENHENQEYQEQEREARVKRMAF--YRNGKEVAGQVSDTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWALKPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTDVPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRF 396          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1325256122|ref|XP_023321250.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Eurytemora affinis] >gi|1325256126|ref|XP_023321258.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Eurytemora affinis] >gi|1325256131|ref|XP_023321267.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 412.92 bits (1060), Expect = 1.642e-134
Identity = 201/369 (54.47%), Postives = 265/369 (71.82%), Query Frame = 0
Query:   18 SQQVLQPVSDIEHDAKADLGFPQRVKRQTFEPYKTGKELAREMSGTLDTLLGP-RYDKRVRP---GFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEEVRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKKSKEF 382
            S ++LQ   + E+    +     RVKR  F  Y+ GKE+A ++S TLD LL   RY++++RP        P+ V +NM+IRSMGPVDE  + FSLDCYFRQ+W D RL +N +GI EL LDW+ L  IWKPDT FLNG++  +HKITVPN+F RISP G VSYSQRLT+ ++C M L KFPFDSQ C L IGSYGY S+++TY W  +P+S++++ +AQ+ +   + GV T+ T RKI +GFRTDS+AFL F F+RQSG+F+L IY PL L+V CSWV+FWI+KTDVPSR  LGVT++LSVTK+GFG K KP++ YATALDV+ I+CF   FA+L+EFA+INFI  + +R K+ E    E   K+   F
Sbjct:   33 SCRILQSQENHENQEYQEQEREARVKRMAF--YRNGKEVAGQVSDTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWALKPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTDVPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRF 399          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1325322975|ref|XP_023343317.1| (glycine receptor subunit alpha-2-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 393.66 bits (1010), Expect = 3.381e-127
Identity = 183/322 (56.83%), Postives = 238/322 (73.91%), Query Frame = 0
Query:   50 YKTGKELAREMSGTLDTLLGPR-YDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEE-VRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKT----DVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYK 365
            YK+GK +  E S TLD LL    Y+KR RP FG +P+ V +N++IRSMGPVDEN + FSLDCYFRQ W D+RL YN +G+ EL+L+W  L  IWKPDTFFLNGK+S +HKITVPN+F RISP G VSYSQRLTI A C M L+KFP DSQ+C L IGS+GY  E+V Y W+ + +S+++ V +AQF L  W+       +  +   G R DS   + F FERQ+G+F+LQIY PL L+VFCSWV+FW++KT    +VP+R  LG TTVLS+  +GFG K KP+V Y+TA+D+++ILCFV+VFA+L+EFA INFI  FI+R++
Sbjct:   69 YKSGKSMGSETSRTLDYLLTESGYNKRFRPSFGGQPIPVFVNLAIRSMGPVDENKEIFSLDCYFRQTWTDERLRYNTTGLNELALNWAFLAKIWKPDTFFLNGKQSFLHKITVPNRFVRISPSGKVSYSQRLTIWAACPMNLRKFPLDSQICKLEIGSFGYTVEDVLYKWQKKALSIDDGVSLAQFHLADWNYQEKIGYSGLRTREGLRNDSTVQIDFFFERQTGFFLLQIYTPLTLIVFCSWVSFWLVKTEKGGEVPARTALGATTVLSIVNLGFGGKSKPKVGYSTAMDIYIILCFVAVFAALVEFASINFIDTFIKRFR 390          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1325322977|ref|XP_023343318.1| (gamma-aminobutyric acid receptor alpha-like isoform X2 [Eurytemora affinis] >gi|1325322979|ref|XP_023343320.1| gamma-aminobutyric acid receptor alpha-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 347.436 bits (890), Expect = 9.874e-111
Identity = 159/275 (57.82%), Postives = 206/275 (74.91%), Query Frame = 0
Query:   96 MGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEE-VRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKT----DVPSRCGLGVTTVLSVTKIGFGPKGKPEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYK 365
            MGPVDEN + FSLDCYFRQ W D+RL YN +G+ EL+L+W  L  IWKPDTFFLNGK+S +HKITVPN+F RISP G VSYSQRLTI A C M L+KFP DSQ+C L IGS+GY  E+V Y W+ + +S+++ V +AQF L  W+       +  +   G R DS   + F FERQ+G+F+LQIY PL L+VFCSWV+FW++KT    +VP+R  LG TTVLS+  +GFG K KP+V Y+TA+D+++ILCFV+VFA+L+EFA INFI  FI+R++
Sbjct:    1 MGPVDENKEIFSLDCYFRQTWTDERLRYNTTGLNELALNWAFLAKIWKPDTFFLNGKQSFLHKITVPNRFVRISPSGKVSYSQRLTIWAACPMNLRKFPLDSQICKLEIGSFGYTVEDVLYKWQKKALSIDDGVSLAQFHLADWNYQEKIGYSGLRTREGLRNDSTVQIDFFFERQTGFFLLQIYTPLTLIVFCSWVSFWLVKTEKGGEVPARTALGATTVLSIVNLGFGGKSKPKVGYSTAMDIYIILCFVAVFAALVEFASINFIDTFIKRFR 275          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1339081312|ref|XP_023701656.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Cryptotermes secundus] >gi|1339081314|ref|XP_023701657.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Cryptotermes secundus] >gi|1339081316|ref|XP_023701658.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Cryptotermes secundus] >gi|1339081318|ref|XP_023701659.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Cryptotermes secundus] >gi|1330926609|gb|PNF39642.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Cryptotermes secundus])

HSP 1 Score: 312.768 bits (800), Expect = 7.155e-96
Identity = 156/307 (50.81%), Postives = 208/307 (67.75%), Query Frame = 0
Query:   56 LAREMSGTLDTLLG-PRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSW-KTQPISLEE-VRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLL--FSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINF 356
            L++ ++ TLD LL   RYDK +RP FG  P+ + +NM I+SMG V E  Q + +DCYFRQ+W D RL ++  G+ E SL W  L+ +WKPDTFFLNGK+S +H+ITVPNKF R+  DG ++YS RLTI A C M L+KFP DSQ CPL IGSYGY + ++ Y W K +P+ +E+ V ++Q+ LV+    ++T    + +     TD  + +   F   R  GYF+LQ+Y P  L+V CSWV+FWI    VP+R  LGVTTVLS+T IGFG + + P V YATALD FVI+CF  VFA +IE+A INF
Sbjct:   32 LSKNITSTLDQLLNKSRYDKGIRPDFGGSPVTIRVNMHIKSMGSVSETDQEYVMDCYFRQSWYDRRLGFSFPGLDEFSLSWLFLDRVWKPDTFFLNGKKSHLHRITVPNKFLRLRNDGFLTYSMRLTIKASCPMHLRKFPLDSQSCPLLIGSYGYRTNDLVYEWDKVRPVVVEDNVELSQYKLVN----ITTEHVGKFVR---ETDEYSVIKAEFHLRRNIGYFVLQLYVPCGLIVSCSWVSFWIDPAAVPARVQLGVTTVLSMTTIGFGGRAQMPRVSYATALDSFVIICFSFVFAVMIEYAAINF 331          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|939269529|ref|XP_014254948.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Cimex lectularius])

HSP 1 Score: 308.531 bits (789), Expect = 2.442e-95
Identity = 154/312 (49.36%), Postives = 208/312 (66.67%), Query Frame = 0
Query:   54 KELAREMSGTLD-TLLGPRYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNSGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQPISLEE-VRMAQFSLVSWDSGVSTNQTNRKI-ETGFRTD-----SIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINF 356
            KE    ++ TL+  LL   YDK++RP FG  P  V +NM I+S+GPV E+   +++D YFRQ+W D RL +   GI ELS+ W  L  IWKPDT+FLNGK+S +H+IT PNKF R+  DG ++YS RLT+ A C+M LKKFP DSQ+CPL IGSYGY S+++ YSW    + LE  V MAQ+ +V+    +STN     +  TG + +     S+    F  +R  GY++LQIY P  L+V CSW++FWI  +DV  R  L VTTVLS+T +GFG + + P+V +ATALD +VI+CF   FA +IE+AVINF
Sbjct:   24 KEFTNNVTDTLNGLLLANNYDKKIRPDFGGPPTLVTVNMHIKSLGPVVEDAAMYTMDVYFRQSWYDRRLKFTLPGISELSMSWLFLEKIWKPDTYFLNGKKSHLHRITSPNKFVRMRHDGHLTYSMRLTLSATCKMHLKKFPLDSQVCPLVIGSYGYTSKDMVYSWSGSGVGLEPGVEMAQYLIVN----ISTNGHVFAVRSTGSKVNNTEIYSVVQAYFFLKRSIGYYVLQIYVPCTLIVCCSWISFWITPSDVAGRTSLAVTTVLSITTLGFGGRSQLPKVGHATALDWYVIICFAFAFAVMIEYAVINF 331          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|1061470915|gb|ODM90107.1| (Gamma-aminobutyric acid receptor subunit alpha-6 [Orchesella cincta])

HSP 1 Score: 303.523 bits (776), Expect = 1.488e-94
Identity = 162/356 (45.51%), Postives = 221/356 (62.08%), Query Frame = 0
Query:   55 ELAREMSGTLDTLLGP-RYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNNS--GIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGS----------------------YGYPSEEVTYSW---KTQPISLEE-VRMAQFSLVSWDSGVSTNQTNRKIETGFRTD--SIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINFITIFIRRYKEAEVRAKELKEKK 378
            EL++ ++  LD LL   RYDKR+RP FG  P+ + +NM I+S+GPV E  + +S+DCYFRQ W D+RL +N S  G+ E S++W  L+ +WKPDT+F+NGK+S +H ITVPNKF R+  DG ++YS RLTI A C M L+KFP DSQ CPL IGS                      YGY + +V Y+W      P+  EE V +AQ+ L       +  +T  +I    R D  S+  + F  +R +GYF+LQ+Y P  L+V CSWV+FWI    VP+R  LGVTTVLS+T +GFG + + P   YATALD FVI+CF  VFAS++E+A INF+    +     +V AK  K+K+
Sbjct:   32 ELSKHVTNLLDGLLKEDRYDKRIRPNFGGPPVTIEVNMYIKSLGPVSETDEVYSMDCYFRQMWVDNRLKFNASATGLSEFSMNWLFLDKVWKPDTYFVNGKKSYLHSITVPNKFLRLRQDGLLTYSMRLTIKASCPMHLRKFPLDSQSCPLEIGSCKRELADDDHDEKASLSKFHLFYGYSNNDVLYAWFKSGKDPVGREEGVNLAQYDL-------TEIKTKEEIRLSSRRDNFSVVAVHFHLKRHTGYFMLQVYVPCTLIVSCSWVSFWIDPQAVPARVSLGVTTVLSMTTLGFGGRSQMPRTSYATALDWFVIICFSFVFASMVEYAAINFLDKMTK-----DVAAKATKKKR 375          
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Match: gi|242021132|ref|XP_002431000.1| (gamma-aminobutyric-acid receptor alpha-2 subunit precursor, putative [Pediculus humanus corporis] >gi|212516224|gb|EEB18262.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor, putative [Pediculus humanus corporis])

HSP 1 Score: 308.145 bits (788), Expect = 1.740e-94
Identity = 153/308 (49.68%), Postives = 213/308 (69.16%), Query Frame = 0
Query:   54 KELAREMSGTLDTLLGP-RYDKRVRPGFGKKPLDVVLNMSIRSMGPVDENTQSFSLDCYFRQAWKDDRLAYNN-SGIRELSLDWKILNMIWKPDTFFLNGKRSKMHKITVPNKFSRISPDGSVSYSQRLTIHARCRMGLKKFPFDSQLCPLYIGSYGYPSEEVTYSWKTQ-PISLEE-VRMAQFSLVSWDSGVSTNQTNRKIETGFRTDSIAFLLFSFERQSGYFILQIYAPLLLMVFCSWVAFWIIKTDVPSRCGLGVTTVLSVTKIGFGPKGK-PEVPYATALDVFVILCFVSVFASLIEFAVINF 356
            K ++  ++ TLD LLG  RYDKR+RPG+G  P+ + +N  I+SMGPV +N +SF LDCYFRQ W D RL Y    G+ E S+ W  L+ +WKPDT+F+NGK+S +H+ITVPNKF R+  DG ++YS RLTI A C M L+KFP D Q CPL +GSYGY  +++ Y W  +  I ++E V +AQF LV+    V+T ++   ++ G    +I    F  +R +GYF+LQ+Y P  L+V CSW++FWI    VP+R  LGVTTVLS+T +GFG + + P+V Y TALD FVI+CF SVF+ +IE+A++N+
Sbjct:   24 KLVSSNVTETLDFLLGSKRYDKRLRPGYGGPPITISVNFFIKSMGPVSDNDESFGLDCYFRQHWYDWRLQYQKIPGLDEFSMSWLFLDRVWKPDTYFVNGKKSYLHRITVPNKFLRLRHDGFITYSMRLTISASCPMYLRKFPLDLQKCPLVLGSYGYTDKDLIYKWTDEDAIGMQEGVEIAQFDLVN----VTTQKSTTMVKGGLPYSTIK-ADFWLKRHTGYFMLQVYIPCGLIVVCSWISFWIDPDAVPARVNLGVTTVLSLTTLGFGGRSQMPKVSYWTALDWFVIICFTSVFSVMIEYAIVNY 326          
The following BLAST results are available for this feature:
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000031203.332e-14949.40supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 ... [more]
EMLSAG000000040911.691e-12553.09supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1... [more]
EMLSAG000000040924.351e-12349.45supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1... [more]
EMLSAG000000090474.978e-6638.52supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-... [more]
EMLSAG000000069682.243e-5137.59supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1... [more]
EMLSAG000000119714.136e-4933.81supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1... [more]
EMLSAG000000009192.189e-4832.99supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1... [more]
EMLSAG000000061953.581e-4630.19supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-... [more]
EMLSAG000000101378.611e-4233.98supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 g... [more]
EMLSAG000000029425.439e-3532.30supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-... [more]

Pages

back to top
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|232127|sp|P30191.1|GBRA6_RAT2.377e-7438.87RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|341941084|sp|P16305.3|GBRA6_MOUSE6.642e-7441.23RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|126302548|sp|Q16445.2|GBRA6_HUMAN7.003e-7441.23RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|3023835|sp|Q90845.1|GBRA6_CHICK1.217e-7241.64RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|143811394|sp|P20237.2|GBRA4_BOVIN6.655e-7040.31RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|206729865|sp|P48169.2|GBRA4_HUMAN1.912e-6939.38RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|13959377|sp|Q9D6F4.1|GBRA4_MOUSE2.008e-6941.75RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|120763|sp|P28471.1|GBRA4_RAT2.230e-6941.75RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|75061993|sp|Q5REA1.1|GBRG2_PONAB8.955e-6937.46RecName: Full=Gamma-aminobutyric acid receptor sub... [more]
gi|120788|sp|P18508.1|GBRG2_RAT9.203e-6937.46RecName: Full=Gamma-aminobutyric acid receptor sub... [more]

Pages

back to top
BLAST of gamma-aminobutyric-acid receptor alpha-2 subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325256144|ref|XP_023321290.1|1.077e-13454.47gamma-aminobutyric acid receptor subunit alpha-6-l... [more]
gi|1325256137|ref|XP_023321274.1|1.180e-13454.47gamma-aminobutyric acid receptor subunit alpha-6-l... [more]
gi|1325256141|ref|XP_023321281.1|1.499e-13454.47gamma-aminobutyric acid receptor subunit alpha-6-l... [more]
gi|1325256122|ref|XP_023321250.1|1.642e-13454.47gamma-aminobutyric acid receptor subunit alpha-6-l... [more]
gi|1325322975|ref|XP_023343317.1|3.381e-12756.83glycine receptor subunit alpha-2-like isoform X1 [... [more]
gi|1325322977|ref|XP_023343318.1|9.874e-11157.82gamma-aminobutyric acid receptor alpha-like isofor... [more]
gi|1339081312|ref|XP_023701656.1|7.155e-9650.81gamma-aminobutyric acid receptor subunit alpha-6-l... [more]
gi|939269529|ref|XP_014254948.1|2.442e-9549.36gamma-aminobutyric acid receptor subunit alpha-6-l... [more]
gi|1061470915|gb|ODM90107.1|1.488e-9445.51Gamma-aminobutyric acid receptor subunit alpha-6 [... [more]
gi|242021132|ref|XP_002431000.1|1.740e-9449.68gamma-aminobutyric-acid receptor alpha-2 subunit p... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1207_size55689supercontigscaffold1207_size55689:11359..13759 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:single-organism transport
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1207_size55689-snap-gene-0.12-mRNA-1maker-scaffold1207_size55689-snap-gene-0.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1207_size55689:11359..13759+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1207_size55689-snap-gene-0.12 ID=maker-scaffold1207_size55689-snap-gene-0.12|Name=gamma-aminobutyric-acid receptor alpha-2 subunit|organism=Tigriopus kingsejongensis|type=gene|length=2401bp|location=Sequence derived from alignment at scaffold1207_size55689:11359..13759+ (Tigriopus kingsejongensis)
ATGATTTGTGCCCAAGTGGCTTGGACCATTCTCCTGTGCAAAATTGGCCT GAGCCAGCAAGTGCTGCAGCCCGTGTCAGACATAGAGCATGACGCCAAGG CGGATTTGGGCTTCCCCCAGAGAGTCAAGCGACAAACCTTCGAGCCGTAC AAAACGGGCAAGGAGTTGGCCCGTGAAATGTCTGGGACCTTGGACACTCT TCTGGGACCACGCTACGATAAACGGGTGCGGCCTGGGTTTGGCAAGAAAC CCTTGGACGTTGTGCTCAATATGTCCATACGCTCCATGGGACCCGTGGAT GAGAACACTCAGGTACATCCATTTAATCGTGGATTTCTTGACTAACTGGG AATAATCCGTGCGGGAAAGGTGGATAAAGTAATTGATATCTGTTAGGTGG TAAAACCAAAACGTGTTCAACGAGTAAAGCGGATATTCACGACCAATCCT AACTGGATTGGCAGCGTGGTCATTGTTTGGATGGCACCTAGCGATCAGCA TTGCTCATGACAAGATCATGAATGAAAGTCATTGACTGGTATTCGAATGA AGACAAGCAGACAAACTGAGGTTTTGTAATGAGACGAGGGATTTAGGGGT ACCTATTGGGGGCGGAATCTATTGACAAAGGAGAGTTTTCAGTTTACAGT TGGTCACGCTATCCACTCGCCGATCCGAGGGGCCTCTGGTTGCTACGCTT TCCCGTACCTATCCTTTCCTACTGTGATTCATCCAAATAGTTATTGAATT CCATGGTTGGCTCCCAATCCAAGGCTTTGGTCTGAGTTGTTATTTCCTTT GTAGTCGTTCTCCCTGGATTGCTACTTCAGACAGGCATGGAAGGACGACC GGTTAGCGTACAACAACTCGGGCATTCGCGAGCTCTCCCTGGATTGGAAG ATCTTGAACATGATTTGGAAGCCCGACACGTTCTTCCTTAATGGGAAGCG GTCCAAGATGCACAAGATAACCGTGCCTAACAAGTTCTCCAGGATCTCTC CGGATGGTAGCGTGAGTTACTCGCAGCGACTCACTATCCATGCCAGATGC CGAATGGGTCTCAAGAAGTTCCCCTTTGATTCTCAACTTTGTCCCTTGTA CATTGGGAGCTATGGTTATCCATCCGAGGAGGTCACCTACTCCTGGAAAA CTCAGGTGAGGATGTATTTGAATCAGTCTTATGTAGAAACTGTTCCTGAC CATTGATTTGGACGGCTTATGAGTATGATTCAAATTTTAAAATAGTAGGC TAGGGCAAGTCTATAAAGTAGTCTGAGAAGCACTTTGCAACGTTTAATTA ATGCTCCTTGACAATAATTTGCGTTTGCAAGGAGGTGGTTAAAAGGATGG TTGGATCGATATTATAAATGAACAATGATGAAATATTTAATTTGCAGCCT ATTTCCTTAGAAGAGGTGAGAATGGCTCAGTTCTCCTTGGTGAGCTGGGA CTCTGGTGTGAGCACGAATCAGACCAATCGGAAGATTGAGACTGGTTTTA GGACTGATTCGATTGCTTTCCTCCTATTCTCCTTTGAGAGGCAATCTGGT TATTTCATCCTGCAAATCTATGCACCTTTGCTACTCATGGTGTTCTGCTC GTGGGTGGCCTTTTGGATCATCAAGACCGATGTTCCCTCGAGATGTGGCC TCGGTAACCACTTTTTCCTAAAACTTAGTATGGTCGGCTCTCATTTTGAA CTGTTACTCTTCCAGGCGTGACCACTGTGCTATCTGTGACCAAGATTGGG TTTGGTCCCAAGGGCAAGCCCGAGGTTCCCTACGCCACAGCCTTGGACGT GTTCGTGATCCTCTGCTTTGTTTCTGTCTTTGCCTCCCTAATTGAGTTTG CCGTGATCAACTTCATCACCATTTTCATCCGGAGGTACAAAGAGGCCGAG GTCAGGGCCAAGGAGCTCAAGGAGAAAAAGAGTAAGGAGTTTGGGGAAAT TGAGCGCAAACTCCTTGAGGAATACAGGAAATCGCGCGCCAAACGTCGCT CCTACTGCCCCATCTGCGATGGGCCGTTTGGGCGGCCACCTTTAGCAGAT TCTGAAAACGGCCAGGAGGATCAGGATGAGGCTGCTTGTGAGGACAACCA TGTGGGAGAACCGGACGAACAGACTCCCCAGGTTATTCCACACAGAGATA CCACGCCAGCCTCGCTTCGGCAGAGAGGGAAGGAGAAGCAGCCCCCAGCG TGGCTCCGGAGGATTCGCAACCGTTTCAAGATGCCTCGGATCGTCAAAAA GCTTGAACATGTTATCCTTTTTGGGTTGTCCCGCGTGGTCTCCTTCCTAA CCATTAAACCGATTCACCAGATGATGATCTACCACAGCACGGATGAGGCC CTGGAAATGATTGACGCTATGTCGAGGAAATACTTCCCTACTGTGTTCAT G
back to top
Synonyms
The feature 'gamma-aminobutyric-acid receptor alpha-2 subunit' has the following synonyms
Synonym
Tk07831
Add to Basket