e-selectin precursor, maker-scaffold121_size336169-snap-gene-2.39 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000006435 (supercontig:LSalAtl2s:LSalAtl2s351:588545:589440:-1 gene:EMLSAG00000006435 transcript:EMLSAT00000006435 description:"maker-LSalAtl2s351-snap-gene-6.35") HSP 1 Score: 145.976 bits (367), Expect = 9.335e-42 Identity = 77/162 (47.53%), Postives = 103/162 (63.58%), Query Frame = 0 Query: 185 CPNAAPNQIHNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCEM 344 C +A PN + DG + I T+ ++G FTA +AD+YC+A GRA SLDT ++A + N+L +RY+WTGGRI H+ V WPSGA + + G WSYTGG + QPDNR+ E+C+ ILNNFY DGI WHDVACHH+KPT+C++ Sbjct: 126 CAHAVPN-LERPDGSKYIMTF-LNGX-SNFTAQEADDYCRANAGRAISLDTTDKANYINNILAQNAQRYLWTGGRIDHNAGVVTWPSGAREGY-QRGKRFWSYTGGASKTEDVP--QPDNRDG------NEVCIAILNNFYADGIRWHDVACHHRKPTICQL 275
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000007572 (supercontig:LSalAtl2s:LSalAtl2s437:165026:167321:1 gene:EMLSAG00000007572 transcript:EMLSAT00000007572 description:"maker-LSalAtl2s437-augustus-gene-1.21") HSP 1 Score: 140.969 bits (354), Expect = 1.062e-40 Identity = 75/162 (46.30%), Postives = 98/162 (60.49%), Query Frame = 0 Query: 185 CPNAAPNQIHNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCEM 344 C + APN + DG R I T+ +C+ FTA QAD YC+ GG+ SLDT ++ F L++ +RY+WTGGRI H TV WPSG + +T G WS+TGG + + QPDNR+ E+CL +LNNFY DG+ WHDV C HKKPT+CE Sbjct: 52 CAHTAPNFTAD-DGSRYILTFL--NDCKSFTAQQADEYCQGNGGKTISLDTTDKGNFVNQLMVKYAQRYIWTGGRINHARSTVTWPSGLSEGYTR-GKRFWSHTGGSSRSVDIP--QPDNRDG------NEVCLAVLNNFYADGVKWHDVGCTHKKPTICEF 201
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000004246 (supercontig:LSalAtl2s:LSalAtl2s222:41948:42649:-1 gene:EMLSAG00000004246 transcript:EMLSAT00000004246 description:"maker-LSalAtl2s222-augustus-gene-0.18") HSP 1 Score: 97.4413 bits (241), Expect = 3.340e-24 Identity = 60/161 (37.27%), Postives = 82/161 (50.93%), Query Frame = 0 Query: 186 PNAAPNQIHNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLLGRR--YMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRG-QPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 P A+ ++F+GKR + +W + +A +YC+ +G R SLD+ + F NLL R Y WTGG I+ D T+ W +G + GV PWS G RG QPD N+ E CL IL N Y DG+ +HDV CH +KP +CE Sbjct: 67 PAASTVGNYDFEGKRYLLSWRDGRSSLDHSA--GSSYCRGKGMRLISLDSSSKINHFFNLLQNERIEYFWTGGSISRDKGTLTWENGQREGISR-GVFPWSDKG--------RRGPQPDGVNS-------ENCLAILKNVYNDGVKFHDVGCHFQKPVICE 209
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000006192 (supercontig:LSalAtl2s:LSalAtl2s338:64951:65840:1 gene:EMLSAG00000006192 transcript:EMLSAT00000006192 description:"maker-LSalAtl2s338-augustus-gene-0.3") HSP 1 Score: 89.3521 bits (220), Expect = 2.282e-22 Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 0 Query: 229 RAASLDTPERAKFFMNLLL--GRRYMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 +A SLD+ +A+ LL +RY WTGG++ H ++V WP+G T+ + WS TG + QPDNR E CL +LNNFY DGI +HDV+CHH KPT+CE Sbjct: 2 KAISLDSNAKAEETFRLLAKDTQRYYWTGGKVNHRDQSVTWPNGQTSR----NIPFWSPTGARRVP------QPDNREG------NEFCLAVLNNFYSDGIKYHDVSCHHVKPTICE 102
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000010831 (supercontig:LSalAtl2s:LSalAtl2s71:261472:278274:-1 gene:EMLSAG00000010831 transcript:EMLSAT00000010831 description:"augustus_masked-LSalAtl2s71-processed-gene-2.2") HSP 1 Score: 89.7373 bits (221), Expect = 2.854e-21 Identity = 66/189 (34.92%), Postives = 85/189 (44.97%), Query Frame = 0 Query: 174 GENPNDRESPRCPNAAPNQIH-NFDGKRVIYTWEISGNCE-KFTAIQADNYCKAQGGRAASLDTPERAKFFMN--LLLGRRYMWTGGRIAHDCKTVFWPSGATTS-----WTEAGV----------APWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 G D + P + IH +F GK+ ++WE S I A N C+ S++T E +F N LL G R+ WT GR D + P T W+ +GV WS TGG QPDNR E C+ ++NNFY DGIVWHD+AC+HKKP VCE Sbjct: 26 GSGNGDLQLPNESDCRNRIIHASFGGKQYFFSWEYSLTQNLSVNWITAXNICRRHCMDTVSIETLEENQFIENRMLLTGTRFTWTSGRKC-DFEGCDRPDLQPTHINGWFWSGSGVRLGSRNGRVEGDWSNTGG------DGEAQPDNREFRVKGEHEESCIAVMNNFYNDGIVWHDIACYHKKPFVCE 207
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000003466 (supercontig:LSalAtl2s:LSalAtl2s18:1138333:1258359:1 gene:EMLSAG00000003466 transcript:EMLSAT00000003466 description:"augustus_masked-LSalAtl2s18-processed-gene-12.0") HSP 1 Score: 75.0998 bits (183), Expect = 4.581e-16 Identity = 59/177 (33.33%), Postives = 74/177 (41.81%), Query Frame = 0 Query: 187 NAAPNQIHNF-DGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLLGRR---YMWTGGRIAH--DCKTV----------FWPSGATTS----WTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 + NQIH D ++W++ + FT Q +YC+ SLD M L R Y+WT GR + C FW S ++ WS TG QPDNR + D E CL +LNN Y DGI WHDVACHHKKP +CE Sbjct: 49 HVCTNQIHTMSDISSYHFSWKVDSQ-KTFTWQQGRDYCRTLCMDLLSLDDGVTEWNAMKSFLIRDDIPYIWTSGRKCNFKGCDHFSLQPPITNGWFWASNKIRIPNPFASKCQHCVWSKTGP----------QPDNREGITAGRD-EXCLAVLNNVYNDGITWHDVACHHKKPVICE 213
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000009947 (supercontig:LSalAtl2s:LSalAtl2s64:564480:569869:1 gene:EMLSAG00000009947 transcript:EMLSAT00000009947 description:"maker-LSalAtl2s64-augustus-gene-5.19") HSP 1 Score: 63.1586 bits (152), Expect = 3.809e-12 Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0 Query: 282 PWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 PWS+TG QPDN ++SD E C+G LN+ Y DG+ WHD+AC+HKK +CE Sbjct: 112 PWSFTGHKTSFAGKNIPQPDNAEYEINQSD-EACMGFLNDIYNDGVTWHDIACYHKKSYICE 172
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000010141 (supercontig:LSalAtl2s:LSalAtl2s66:535673:559564:-1 gene:EMLSAG00000010141 transcript:EMLSAT00000010141 description:"maker-LSalAtl2s66-snap-gene-5.20") HSP 1 Score: 62.003 bits (149), Expect = 8.553e-12 Identity = 57/169 (33.73%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 199 KRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAH--DC-------KTVFWPSG------ATTS----WTEAGVAPWSYTGGW-DIAPNCTRGQPDNRNALR--DRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 K I + E+ GN K + A N C+ S+++P + ++ G R +WT GR+ + C + V++ SG AT S W E PWS TG N QPDN L D + E CL I NN+Y DGI WHD AC+ KK +CE Sbjct: 2 KNQIVSEELHGN--KANWLDARNLCRELCMDLISIESPIENELIQQIIAEKGLRDVWTSGRLCNFKGCDKPHLQPRNVWFWSGSGERIYATNSTPPGWPEK---PWSRTGYIGQFLENRDVPQPDNAEYLLKPDLVNVEACLSINNNWYDDGIAWHDSACYRKKSFICE 165
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000000915 (supercontig:LSalAtl2s:LSalAtl2s115:403109:404569:-1 gene:EMLSAG00000000915 transcript:EMLSAT00000000915 description:"augustus_masked-LSalAtl2s115-processed-gene-5.0") HSP 1 Score: 53.9138 bits (128), Expect = 1.594e-8 Identity = 44/169 (26.04%), Postives = 63/169 (37.28%), Query Frame = 0 Query: 212 EKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLLGRRY--MWTGGRIAH--------------DCKTVFWPSGATT----SWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRD-----------------RSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 E + N+C+ + S DTPE K F ++ ++T GR + + FW T + ++ WS+TG + QPDN +++ E CL LNN Y DGI WHDVACH + VCE Sbjct: 20 EDWDWFNGRNFCRDRCMDLISFDTPEEFKTFAKIMQADNVSSIYTSGRKCNFKGKGCDASHLQPINANGWFWAGAGNTRIPDTSSQTSNTYWSFTG------EQGQKQPDNFEGVKEGPIETEFDIGVTIEGLQEFHDEACLAALNNKYNDGISWHDVACHFRSVIVCE 182
BLAST of e-selectin precursor vs. L. salmonis genes
Match: EMLSAG00000002645 (supercontig:LSalAtl2s:LSalAtl2s1534:3975:5135:-1 gene:EMLSAG00000002645 transcript:EMLSAT00000002645 description:"augustus_masked-LSalAtl2s1534-processed-gene-0.4") HSP 1 Score: 50.8322 bits (120), Expect = 1.240e-7 Identity = 44/169 (26.04%), Postives = 65/169 (38.46%), Query Frame = 0 Query: 212 EKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLLGRRY--MWTGGRIAHDCKTVFWPSGATT-SWTEAGVAPWSYTGG----------------WDIAPNCTRGQPDNRNALR-----DRSDP-------------EICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 E + A ++C+ + SL++ K F ++ + +WT GR K F G + V W ++G W + QPDN L+ + +DP E CL +LNN + DGI WHD ACH + P VCE Sbjct: 69 EDWDWFNARSFCRERCMDLISLESSTEFKMFQEVMEQDKIKSIWTSGR-----KCNFQGKGCDKPKFQPINVRGWFWSGAGNSRLPPTNKRNKNTYWSKTGKAKKPQPDNFEGLKAGXLTNVTDPVGLTIEGLQEWHDEACLIVLNNAFKDGISWHDSACHIRSPIVCE 232
BLAST of e-selectin precursor vs. nr
Match: gi|225711840|gb|ACO11766.1| (E-selectin precursor [Lepeophtheirus salmonis]) HSP 1 Score: 149.058 bits (375), Expect = 4.472e-39 Identity = 78/162 (48.15%), Postives = 104/162 (64.20%), Query Frame = 0 Query: 185 CPNAAPNQIHNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCEM 344 C +A PN + DG + I T+ ++G C FTA +AD+YC+A GRA SLDT ++A + N+L +RY+WTGGRI H+ V WPSGA + + G WSYTGG + QPDNR+ E+C+ ILNNFY DGI WHDVACHH+KPT+C++ Sbjct: 126 CAHAVPN-LERPDGSKYIMTF-LNG-CSNFTAQEADDYCRANAGRAISLDTTDKANYINNILAQNAQRYLWTGGRIDHNAGVVTWPSGAREGY-QRGKRFWSYTGGASKTEDVP--QPDNRDG------NEVCIAILNNFYADGIRWHDVACHHRKPTICQL 275
BLAST of e-selectin precursor vs. nr
Match: gi|1325301869|ref|XP_023332476.1| (uncharacterized protein LOC111704467 [Eurytemora affinis]) HSP 1 Score: 131.339 bits (329), Expect = 3.542e-32 Identity = 72/146 (49.32%), Postives = 87/146 (59.59%), Query Frame = 0 Query: 202 IYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAHDCKTVFW--PSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 + TW+ C F A YC + G A SLD+PE+ F L+ +R+ WTGG + H KTVFW PSG ++++ A WS TGG + QPDNR A S PE+CLGILNNFY DGI WHDVACHHKKPTVCE Sbjct: 151 VVTWKF--GCSSFQQSDAKEYCNSMGMEAVSLDSPEKQDEFNRLIAQDAQRFFWTGGIVDHAQKTVFWNNPSGTPIPFSQS--AHWSNTGGAGLP------QPDNRAAGEVPSTPEVCLGILNNFYADGIKWHDVACHHKKPTVCE 286
BLAST of e-selectin precursor vs. nr
Match: gi|1325314125|ref|XP_023338739.1| (uncharacterized protein LOC111709330 [Eurytemora affinis]) HSP 1 Score: 115.546 bits (288), Expect = 3.272e-27 Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 0 Query: 194 HNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLL--LGRRYMWTGGRIAHDCK-TVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 H+F+G+ + +W C FT + +C++QG + SLDTP + + F L+ G++Y WTGG + H + TV WPSG TTS WS TGG R QPDNR E CL +LNNFY DG+ +HDV+CHH+KP +CE Sbjct: 59 HSFEGRSYLISWRA--GCTSFTHGEGAAFCRSQGMQPVSLDTPSKEREFTGLVGREGQKYFWTGGTVNHGGRPTVSWPSGRTTS-----SGLWSNTGG------AGRPQPDNREG------NEFCLAVLNNFYNDGVRFHDVSCHHRKPVICE 192
BLAST of e-selectin precursor vs. nr
Match: gi|1325279158|ref|XP_023324228.1| (uncharacterized protein LOC111698199 [Eurytemora affinis]) HSP 1 Score: 99.3673 bits (246), Expect = 7.854e-21 Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 0 Query: 194 HNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLLGRR--YMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 + + GK + TW +G + F + ++C++QG + SLD+ E+A F+ L+ R Y W GG ++ D +T+ W +G T G PWS+TG T QPD E CL ILNN Y DG+ +HDVACHHKKP +CE Sbjct: 93 YQWGGKNFLLTWR-NGRSD-FAWSEGVSFCRSQGMQLVSLDSAEKADHFLGLIGSDRSPYSWVGGEVSGDSRTLSWLNGKTDD-VRKGQHPWSFTG-------RTGPQPDG---------GERCLAILNNTYRDGVKFHDVACHHKKPVICE 225
BLAST of e-selectin precursor vs. nr
Match: gi|155966252|gb|ABU41080.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 89.3521 bits (220), Expect = 2.137e-18 Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 0 Query: 229 RAASLDTPERAKFFMNLLL--GRRYMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 +A SLD+ +A+ LL +RY WTGG++ H ++V WP+G T+ + WS TG + QPDNR E CL +LNNFY DGI +HDV+CHH KPT+CE Sbjct: 2 KAISLDSNAKAEETFRLLAKDTQRYYWTGGKVNHRDQSVTWPNGQTSR----NIPFWSPTGARRVP------QPDNREG------NEFCLAVLNNFYSDGIKYHDVSCHHVKPTICE 102
BLAST of e-selectin precursor vs. nr
Match: gi|290462301|gb|ADD24198.1| (L-selectin [Lepeophtheirus salmonis]) HSP 1 Score: 89.3521 bits (220), Expect = 3.172e-17 Identity = 63/188 (33.51%), Postives = 81/188 (43.09%), Query Frame = 0 Query: 174 GENPNDRESPRCPNAAPNQIH-NFDGKRVIYTWEISGNCEK-FTAIQADNYCKAQGGRAASLDTPERAKFFMN--LLLGRRYMWTGGRIAH------------DCKTVFWPSGATTSWTEAGVAP--WSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 G D + P + IH +F GK+ ++WE S I A N C+ S++T E +F N LL G R+ WT GR + FW + G WS TGG QPDNR E C+ ++NNFY DGIVWHD+AC+HKKP VCE Sbjct: 26 GSGNGDLQLPNKSDCRNRIIHASFGGKQYFFSWEYSLTQNLPVNWITARNICRRHCMDTVSIETLEENQFIENRMLLTGTRFTWTSGRKCNFEGCDRPDLQPTHINGWFWSGSGVRLGSRNGRVEGDWSNTGG------DGEAQPDNREFRVKGEHEESCIAVMNNFYNDGIVWHDIACYHKKPFVCE 207
BLAST of e-selectin precursor vs. nr
Match: gi|1127775848|gb|APS85776.1| (extracellular regulated MAP kinase 1 [Paracyclopina nana]) HSP 1 Score: 93.2041 bits (230), Expect = 3.228e-17 Identity = 74/260 (28.46%), Postives = 116/260 (44.62%), Query Frame = 0 Query: 110 PNNNFQPQNNNFQ-----PQPSQT--FNRPAQPAFSS----NNQQSWSALFPQSR--------GVCAKDP---ADGNSPNS-GCRPPGENPNDR---ESPRCPNAAPNQIHNFDGKRVIYTWEISGNCEKFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLLGRRYMWTGGRIAHDCKTVFWPSGATTSWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 P N+ Q + Q P P +T P +F + + +W LFP++ + A DP AD S + P +P D E P +++ + K ++Y ++ + T + G R +SL+ + ++ R++WTGG++ H ++V WP+GAT++ WS+TGG + QPDNR E C GILNNFY DGI +HD+ACHH+K +CE Sbjct: 329 PGKNYLDQISKIQEVLGTPSPDETEFIRNPKAKSFLAGLPRRAKVAWPNLFPKADVKGLELLDKLLAFDPSRRADVESALAHAYLTPYYDPADEPVSEKPFTFEMEFDELPTKELKEMVYKEAVAFKMAQLTETSLN------GFRPSSLENQAKVNIAYQMVRPLRFLWTGGQVNHSSRSVSWPNGATST------PDWSFTGGNRVP------QPDNREG------NEFCTGILNNFYGDGIKFHDIACHHRKAALCE 564
BLAST of e-selectin precursor vs. nr
Match: gi|987909685|ref|XP_015430487.1| (PREDICTED: L-selectin [Dufourea novaeangliae] >gi|1016161638|gb|KZC08800.1| hypothetical protein WN55_11303 [Dufourea novaeangliae]) HSP 1 Score: 88.9669 bits (219), Expect = 4.368e-17 Identity = 62/168 (36.90%), Postives = 85/168 (50.60%), Query Frame = 0 Query: 197 DGKRVIYTWEISGNCEKFTAIQAD-----NYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAH------------DCKTVFWP-SGATT-SWTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 DG+ V +++ S + ++ D N C+ A SL+TP+ +F L+ RY+WT GR + + FW SGA + T+ WS+TGG+ A QPDNR A + + E CL ILNNFY DG+ WHDVACHH+KP VCE Sbjct: 40 DGRGVAHSYFFSWEHQPTRNLEVDWLDSRNICRRHCMDAVSLETPQENEFIKQRLVRGNVRYIWTSGRKCNFNGCDRPDLQPQNVNGWFWSGSGAKIGATTQRNSGDWSHTGGYGQA------QPDNREAAQ--GNDESCLSILNNFYNDGVKWHDVACHHRKPFVCE 199
BLAST of e-selectin precursor vs. nr
Match: gi|1233177290|ref|XP_022190016.1| (uncharacterized protein LOC111048441 [Nilaparvata lugens] >gi|1233177292|ref|XP_022190017.1| uncharacterized protein LOC111048441 [Nilaparvata lugens] >gi|1233177294|ref|XP_022190018.1| uncharacterized protein LOC111048441 [Nilaparvata lugens] >gi|1233177296|ref|XP_022190019.1| uncharacterized protein LOC111048441 [Nilaparvata lugens] >gi|1233177298|ref|XP_022190020.1| uncharacterized protein LOC111048441 [Nilaparvata lugens]) HSP 1 Score: 88.9669 bits (219), Expect = 4.591e-17 Identity = 60/173 (34.68%), Postives = 84/173 (48.55%), Query Frame = 0 Query: 189 APNQIHN-FDGKRVIYTWEISGNCE-KFTAIQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIA--HDCKTVFWPSGATTSW------------TEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 A ++H+ F+G ++W+ + + + N+C+A+ SL T + NLL+ RY+WT GR+ C A W T+ WS TGG R QPDNR L++ + PE CL +LNNFY DG+ WHDVACHH+KP VCE Sbjct: 33 AQRKVHDKFNGHGYYFSWKDPATAKMEEDWLGGRNWCRARCMDLVSLQTAAENNYIKNLLVQDKVRYIWTSGRMCDFKGCDRADLQPKAINGWFWTAELQKLPPTTDRSQNDWSETGG------IGRPQPDNREELQNGA-PENCLAVLNNFYNDGVHWHDVACHHRKPFVCE 198
BLAST of e-selectin precursor vs. nr
Match: gi|290578550|gb|ADD51171.1| (conserved hypothetical protein [Apis mellifera]) HSP 1 Score: 88.5817 bits (218), Expect = 5.030e-17 Identity = 58/143 (40.56%), Postives = 73/143 (51.05%), Query Frame = 0 Query: 217 IQADNYCKAQGGRAASLDTPERAKFFMNLLL--GRRYMWTGGRIAH------------DCKTVFWP-SGATTS-WTEAGVAPWSYTGGWDIAPNCTRGQPDNRNALRDRSDPEICLGILNNFYVDGIVWHDVACHHKKPTVCE 343 + A N C+ A SL+TP+ +F + RY+WT GR + + FW SGA T+ WS+TGG+ A QPDNR A + + E CL ILNNFY DGI WHDVACHH+KP VCE Sbjct: 65 LDARNICRRHCMDAVSLETPQENEFIKQRIARGNVRYIWTSGRKCNFNGCDRPDLQPQNINGWFWSGSGAKIGPTTQRNTGDWSHTGGYGQA------QPDNREAAQ--GNDESCLSILNNFYNDGIKWHDVACHHRKPFVCE 199 The following BLAST results are available for this feature:
BLAST of e-selectin precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 10
BLAST of e-selectin precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of e-selectin precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold121_size336169:247288..249649- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold121_size336169-snap-gene-2.39 ID=maker-scaffold121_size336169-snap-gene-2.39|Name=e-selectin precursor|organism=Tigriopus kingsejongensis|type=gene|length=2362bp|location=Sequence derived from alignment at scaffold121_size336169:247288..249649- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'e-selectin precursor' has the following synonyms
Add to Basket
|